prot_S-dermatodea_contig9982.17900.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9982.17900.1
Unique Nameprot_S-dermatodea_contig9982.17900.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length621
Homology
BLAST of mRNA_S-dermatodea_contig9982.17900.1 vs. uniprot
Match: A0A6H5JVR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVR9_9PHAE)

HSP 1 Score: 474 bits (1219), Expect = 7.590e-157
Identity = 303/581 (52.15%), Postives = 358/581 (61.62%), Query Frame = 0
Query:   61 DSTRPIGEDIINLVATFASCRDLCTLSFVCRRFRPVASQDDQWELRALDILPSRDQLLSAMAELQLTSFRQLVEALTRIGIPGGALGFWRAEVPAKSWAAQLELSSRLFSSPEGQARAAEEIDMRGELLRISLAARGFLCESIASDGTSRTVFTARISVTAHQKVKVGFFCSEDDSAATMGGD--SWCPGRTIGEAFLDHATVVPSAADRTPIRPAGNNAFFFTR-DGTQTRFTKLQAPPPPFDRMAVAAHSRGDPNYPAAAAAVAVNLCGLWCAPYGSHEMEIVQISVGSDAAAAQEVPGVPARAAK-----------ASGRF-TGSTCSSSKTSR----SESVCTSAPATDSS--------EGGFXXXXXXXXXXXXXXVERKTSS----IEPKAATKATTTASAAPRNDAQSAAVFGVEAAELGDDEDQIMSGGADTDQAGYAGLLPLSLFGVKVTGDANVPAGKTSFAIDLDKDFDIGEELEADRRPVILFLPTGAVMANLANRRGNIAFWRKGRGQINRVPGRWAPEWVDVDFVAYQPGSRCAFSVVFRQPAQAVRVIMDFERVLGAKEEWPQWPA 610
            D TR + +D IN+VA+FASC DLC L+ VCRRF P+   DD WELRALDILPS  Q+ SAM++L+LTSFRQLVEA T IGIPGG LGFW+AE P  +W  Q +    L  +   Q  A      RGELLRI+L A GFLCESIA  GT R +FT R+S T   ++K+GFFC E +SA T+GGD  SW PG ++ EA   +   +P +  RTPIR +G  AFF  R DG   R+ KL APP         A S G      AAA    NLCGLWCAPYGSH +EI+Q+S     +  +E      +AA            A GR     + S S TSR    SESVCTS PATD+         E G XXXXXXXXXXXXXX    +S     IE             +  +D   A++   +   L   +      GA    A     +P  LFG KVTGD NVPAGKTSF IDL  DFD+ EEL +D RPV+ FLPTGAVMANLANRR  I+ WRKGRGQINRVPGRW+PEWVDV+FV Y+ GSRCAFSV+FRQP QAVRV+MDFER LG +EEWPQW A
Sbjct:   55 DKTRLLDDDTINVVASFASCHDLCVLAEVCRRFSPLPFCDDLWELRALDILPSVPQVHSAMSQLKLTSFRQLVEAFTLIGIPGGVLGFWQAEAPTLAWDVQQQQQGGLDGTTVQQPEA------RGELLRITLEAGGFLCESIAPSGTRRRIFTIRVSKTPTGRIKIGFFCLEKESALTIGGDNDSWVPGDSMAEALARYTFAIPGSTRRTPIRASGTKAFFLERNDGRTCRYVKLTAPP---------ASSPGG-----AAAGAVKNLCGLWCAPYGSHGLEIIQLSTDPSCSPNEETAAAAVKAATVVKLSSLSQSWAGGRGGRRGSVSGSSTSRVTDGSESVCTSTPATDADGSEADSCDEAGGXXXXXXXXXXXXXXXXXXSSDGHGDIE-------------SVLDDGCLASIARRKGNSLHHADTATAGSGAGAGDAS----VPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRRQQISCWRKGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQWSA 598          
BLAST of mRNA_S-dermatodea_contig9982.17900.1 vs. uniprot
Match: D7FWS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS5_ECTSI)

HSP 1 Score: 400 bits (1029), Expect = 1.100e-129
Identity = 252/518 (48.65%), Postives = 301/518 (58.11%), Query Frame = 0
Query:  121 MAELQLTSFRQLVEALTRIGIPGGALGFWRAEVPAKSWAAQLELSSRLFSSPEGQARAAEEIDMRGELLRISLAARGFLCESIASDGTSRTVFTARISVTAHQKVKVGFFCSEDDSAATMGGD--SWCPGRTIGEAFLDHATVVPSAADRTPIRPAGNNAFFFTR-DGTQTRFTKLQAPPPPFDRMAVAAHSRGDPNYPAAAAAVAVNLCGLWCAPYGSHEMEIVQISVGSDAAAAQEVPGVP-------ARAAKASG------------RFTGSTCSSSK-TSRSESVCTSAPATDS--SEGGFXXXXXXXXXXXXXXVERKTSSIEPKAATKATTTASAAPRNDAQSA---AVFGVEAAELGDDEDQIMSGGADTDQAGYAGLLPLSLFGVKVTGDANVPAGKTSFAIDLDKDFDIGEELEADRRPVILFLPTGAVMANLANRRGNIAFWRKGRGQINRVPGRWAPEWVDVDFVAYQPGSRCAFSVVFRQPAQAVRVIMDFERVLGAKEEWPQWPA 610
            MA+L+LTSFRQLVEA T IGIPGG LGFW+AE P  SW  Q +    L  +        +E + RGELLRI+L A GFLCESIA +GT R +FT R+S T   ++ +GFFC E +S+ T+GGD  SW PG ++ EA   +   VP +  RTP+R +G  AFF  R DG   R+ KL APP               P   AAA AV  NLCGLWCAPYGSH +EI+Q+S     +  +E            A  AK S             R + S CS+S+ T  SESVCTS PATD+  SE G          XXXXX                   +      D +S          A   G+      +G A +        +P  LFG KVTGD NVPAGKTSF IDL  DFD+ EEL +D RPV+ FLPTGAVMANLANRR  I+ WR GRGQINRVPGRW+PEWVDV+FV Y+ GSRCAFSV+FRQP QAVRV+MDFER LG +EEWPQW A
Sbjct:    1 MAQLKLTSFRQLVEAFTLIGIPGGVLGFWQAEAPTLSWDVQQQQQGGLDGA------TVQEREARGELLRITLEAGGFLCESIAPNGTRRRIFTIRVSKTPTDRINIGFFCLEKESSLTIGGDDDSWVPGDSMAEALARYTFAVPGSTKRTPMRASGTKAFFLERNDGRTCRYVKLTAPP------------ASSPGVVAAAGAVK-NLCGLWCAPYGSHGLEIIQLSTDPSCSPDEETAAAXXXXXXKAATVAKLSSLSQSWAGGRGGPRGSVSGCSTSRMTDGSESVCTSTPATDADGSEAGSCDEAGGSSEXXXXXXXXXXXXXS----------SDGDGDGDVESVLDDVCLASIARRKGNSLHHADTGTAGSGAGAGDASVPSQLFGFKVTGDDNVPAGKTSFVIDLSTDFDVDEELRSDSRPVVTFLPTGAVMANLANRRQQISCWRNGRGQINRVPGRWSPEWVDVEFVEYRAGSRCAFSVIFRQPNQAVRVVMDFERALGCEEEWPQWSA 489          
BLAST of mRNA_S-dermatodea_contig9982.17900.1 vs. uniprot
Match: A0A7S2B2Q2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2Q2_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.520e-24
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 0
Query:  482 LFGVKVTGDANVPAGKTSFAIDLDKDFDIGEELEADRRPVILFLPTGAVMANLANRRGNIAFWRKGRGQINRVPGRWAPEWVDVDFVAYQPGSRCAFSVVFRQPAQAVRVIMDFERV 598
            L G+KV GDANVPA K SF +D  + FD  E L  D R V+ F P GAV+A+L  R+ NI  W +G GQINR+ G WAPEWV +DF+ Y   S   FSV++ +  + +R ++DF ++
Sbjct:  405 LEGLKVVGDANVPASKLSFVVDSSQQFDPSERLAMDHRLVVAFPPEGAVIADLMLRKHNITAWYRGMGQINRIQGEWAPEWVGIDFLVYNGSSPTGFSVLWDEQGEVIRHVIDFSKL 521          
BLAST of mRNA_S-dermatodea_contig9982.17900.1 vs. uniprot
Match: A0A7S2F4S0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F4S0_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.950e-23
Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 0
Query:  482 LFGVKVTGDANVPAGKTSFAIDLDKDFDIGEELEADRRPVILFLPTGAVMANLANRRGNIAFWRKGRGQINRVPGRWAPEWVDVDFVAYQPGSRCAFSVVFRQPAQAVRVIMDFERV 598
            L G+KV GDANVP  K SF +DL    DI   L +D R V+ F P G V+ +L  R  +I  W +G GQINR  G+WAPEWV +DF+ Y   S+ A+S+V+ +  + +R ++DF RV
Sbjct:  200 LEGMKVIGDANVPTSKLSFVVDLSDPSDISTRLASDTRQVVSFPPDGFVIMDLNRRERDIVAWYRGAGQINRQKGKWAPEWVGLDFIVYNKNSKAAYSLVWDEDDEELRHMIDFTRV 316          
BLAST of mRNA_S-dermatodea_contig9982.17900.1 vs. uniprot
Match: A0A7S2WNK3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNK3_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.110e-20
Identity = 53/117 (45.30%), Postives = 77/117 (65.81%), Query Frame = 0
Query:  482 LFGVKVTGDANVPAGKTSFAIDLDKDFDIGEELEADRRPVILFLPTGAVMANLANRRGNIAFWRKGRGQINRVPGRWAPEWVDVDFVAYQPGSRCAFSVVFRQPAQAVRVIMDFERV 598
            L G+KV GDANVPA + SFA+++ + ++  + L  D R V+ F P GAV+A+L  RR NI  W +G GQINR+ G W P+WV +DF+ Y  G    FSV++ +  + +R I+DF R+
Sbjct:  570 LEGLKVVGDANVPASQLSFAVNMTQTYNPTDRLAMDHRLVVAFPPEGAVIADLNIRRDNIVAWYRGLGQINRIQGVWEPDWVGIDFLVYGSGP-VGFSVLWDEQGEVIRHIIDFVRL 685          
BLAST of mRNA_S-dermatodea_contig9982.17900.1 vs. uniprot
Match: A0A061QLQ6_9CHLO (Uncharacterized protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QLQ6_9CHLO)

HSP 1 Score: 88.2 bits (217), Expect = 4.240e-16
Identity = 55/121 (45.45%), Postives = 71/121 (58.68%), Query Frame = 0
Query:  475 AGLLPLSLFGVKVTGDANVPAGKTSFAIDLDKDFDIGEELEADRRPVILFLPTGAVMANLANRRGNIAFWRKGRGQINRVPGRWAPEWVDVDFVAYQPGSRCAFSVVFRQPAQAVRVIMDF 595
            AG+  L L G+K+TGD NVPA K SF   L +  D  E + AD RP+I F  TG  + NL +R   +A    G+GQINR P  WAPEWVDV  + Y  G R  FS+++    +  R I+DF
Sbjct:   79 AGIGGLRLVGLKLTGDPNVPATKLSFVAALTEPDD-PEGVLADLRPIIAFPSTGPAVVNLQDR--EVAGLFLGKGQINRDPDVWAPEWVDVRLITYS-GQRKGFSILWHDMGEFWRHIIDF 195          
BLAST of mRNA_S-dermatodea_contig9982.17900.1 vs. uniprot
Match: W7TAG1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAG1_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.050e-5
Identity = 48/142 (33.80%), Postives = 70/142 (49.30%), Query Frame = 0
Query:  473 GYAGLLP-----LSLFGVKVTGDANVPAGKTSFAIDLDKD-FDIGEELEADRRPVILFLPTGAVMAN--LANRRGNIAFWRKGRGQINRVPGRWAPEWVDVDFVAY---QPGSRCAFSVVFRQPAQAVRVIMDFERVLGAKE 603
            G AG  P     + L G+K+ GDANVPA + +F  D+     D  E L AD RP I  L T  V  +  LA   G I    +G+GQ+N VPG W P+ V VD +     + G R    +++     + R  ++  R++  +E
Sbjct:  282 GSAGTSPSIGGRVILEGLKLVGDANVPANEWTFRADVTAPPLDRAEALGADTRP-IYSLTTRMVPQSWVLAEEAGRIRAVYRGKGQVNMVPGIWEPQEVGVDVMLLRREENGGRGGIWLLWHDEGFSSRHCIELTRLIEGEE 422          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9982.17900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JVR9_9PHAE7.590e-15752.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWS5_ECTSI1.100e-12948.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2B2Q2_9STRA1.520e-2447.86Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2F4S0_9STRA5.950e-2346.15Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WNK3_9STRA4.110e-2045.30Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A061QLQ6_9CHLO4.240e-1645.45Uncharacterized protein n=2 Tax=Tetraselmis sp. GS... [more]
W7TAG1_9STRA3.050e-533.80Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021894Domain of unknown function DUF3506PFAMPF12014DUF3506coord: 327..502
e-value: 4.2E-7
score: 30.1
IPR026941F-box only protein 31PANTHERPTHR10706:SF130F-BOX ONLY PROTEIN 31coord: 41..513
NoneNo IPR availablePANTHERPTHR10706F-BOX FAMILY PROTEINcoord: 41..513
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 53..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9982contigS-dermatodea_contig9982:2218..6615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9982.17900.1mRNA_S-dermatodea_contig9982.17900.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9982 2183..7602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9982.17900.1 ID=prot_S-dermatodea_contig9982.17900.1|Name=mRNA_S-dermatodea_contig9982.17900.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=621bp
MLQTPFLTSPTKARTLTASPVLPAAGLPLLSKGIHPISMFSSKHARLSVP
RARTSASTDADSTRPIGEDIINLVATFASCRDLCTLSFVCRRFRPVASQD
DQWELRALDILPSRDQLLSAMAELQLTSFRQLVEALTRIGIPGGALGFWR
AEVPAKSWAAQLELSSRLFSSPEGQARAAEEIDMRGELLRISLAARGFLC
ESIASDGTSRTVFTARISVTAHQKVKVGFFCSEDDSAATMGGDSWCPGRT
IGEAFLDHATVVPSAADRTPIRPAGNNAFFFTRDGTQTRFTKLQAPPPPF
DRMAVAAHSRGDPNYPAAAAAVAVNLCGLWCAPYGSHEMEIVQISVGSDA
AAAQEVPGVPARAAKASGRFTGSTCSSSKTSRSESVCTSAPATDSSEGGF
GGSCSSNESDEEDEVERKTSSIEPKAATKATTTASAAPRNDAQSAAVFGV
EAAELGDDEDQIMSGGADTDQAGYAGLLPLSLFGVKVTGDANVPAGKTSF
AIDLDKDFDIGEELEADRRPVILFLPTGAVMANLANRRGNIAFWRKGRGQ
INRVPGRWAPEWVDVDFVAYQPGSRCAFSVVFRQPAQAVRVIMDFERVLG
AKEEWPQWPADVSPAASAAL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021894DUF3506
IPR026941FBXO31
IPR036047F-box-like_dom_sf