mRNA_S-dermatodea_contig12938.1789.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig12938.1789.1
Unique NamemRNA_S-dermatodea_contig12938.1789.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig12938.1789.1 vs. uniprot
Match: D7FW41_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW41_ECTSI)

HSP 1 Score: 978 bits (2528), Expect = 0.000e+0
Identity = 489/601 (81.36%), Postives = 528/601 (87.85%), Query Frame = 1
Query:    1 MDVDDDAPMTNGGVDAAGEDAT-----DTAVLVCEECEDRRSTWDCREGCGGLFCDVCFYALHRKGKRALHKPENIARPGATAGSGGGGQVGGGEGRGLLSGWIGPRLP-QKEEVNPDMYDRQPNIYLYCLRQCRKSFSERSKYIPVRLTSEERSYLRLVESVISVTDYTGKVDGDFASENKRRNLVLKQITRFLGGLVLAVDYKQGMAMIDDRGYSEHEEYFRDVLEIARRHKIMNPEKMRTEYAKMIYLMQDAVSPQVREILKLNIKRGVKSVYEFLKGKGGLAVLSDPDVEMATREVLANGRPRPQITKDIRRKETAVAQIKRRYSTASLSEDDIHTCLYSMCDNDSFLNSNRVPIDKMIAYLEKYFSPDTPGDDEYSLAISAGESGARLTHSHARQYNFALQSLTLWREIMHDMFRLWCLGEEDLLSETVHYKLTDTGQGKQRVQQSPRTFKAMQEILYHAQRGVKSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKDDHIKNLVDTGYGGLETLKKDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTGFDGEFQR 1785
            MD D DA M NGG  A+  D        +    CEECEDRR  WDC++GCGG+FCDVCFYALHRKGKRALHKPE I RPGA  G+      G   G+GL SGWIGPRLP QKEE +PDMYDR             KSFSERSKYIPVRLTS+ER YLRLVESVISVTDYTGKVD DF S +KR +L+LKQITRFL GLVLAVDY++GM MID+RGYSEHE +F+DVLEIARRHKIMNPEKMRTEYAK+IYLMQDAVSP+ + IL LNIKRGVKSVYEFL+ +GGLA+LSDP+VE+ATREVLANGRPRPQITKDIRRKETAVAQIKR+Y+T +LS+DDIHTCLYSMCDNDSFLNSNRVPIDKMIA+LEKYFSPDTPGDD YSLAISAGE GARLTHSHARQYNFA QSLTLWR+IMHDMFRLWCLGEEDLLSE+  YKL DTGQGKQRVQ SP+TFKAMQEIL+HAQ GV+SWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKD+HI+NL+DTGYGGLETL+KDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFT FDGEFQR
Sbjct:    1 MDSDGDAAMANGGGGASANDENCASGERSVPEHCEECEDRRPVWDCKQGCGGVFCDVCFYALHRKGKRALHKPEKIERPGAATGN-----CGPAAGKGL-SGWIGPRLPPQKEEAHPDMYDR-------------KSFSERSKYIPVRLTSDERRYLRLVESVISVTDYTGKVDADFPSASKRSHLILKQITRFLSGLVLAVDYQKGMTMIDERGYSEHEGFFQDVLEIARRHKIMNPEKMRTEYAKLIYLMQDAVSPEAQRILNLNIKRGVKSVYEFLRERGGLAILSDPNVEIATREVLANGRPRPQITKDIRRKETAVAQIKRKYATHNLSQDDIHTCLYSMCDNDSFLNSNRVPIDKMIAFLEKYFSPDTPGDDAYSLAISAGEGGARLTHSHARQYNFAHQSLTLWRDIMHDMFRLWCLGEEDLLSESFAYKLVDTGQGKQRVQNSPQTFKAMQEILFHAQHGVQSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKDEHIQNLIDTGYGGLETLRKDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTSFDGEFQR 582          
BLAST of mRNA_S-dermatodea_contig12938.1789.1 vs. uniprot
Match: A0A835Z3Z0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z0_9STRA)

HSP 1 Score: 622 bits (1604), Expect = 4.020e-215
Identity = 308/468 (65.81%), Postives = 375/468 (80.13%), Query Frame = 1
Query:  385 RKSFSERSKYIPVRLTSEERSYLRLVESVISVTDYTGKVDGDFASENKRRNLVLKQITRFLGGLVLAVDYKQGMAMIDDRGYSEHEEYFRDVLEIARRHKIMNPEKMRTEYAKMIYLMQDAVSPQVREILKLNIKRGVKSVYEFLKGKGGLAVLSDPDVEMATREVLANG-RPRPQITKDIRRKETAVAQIKRRYSTASLSEDDIHTCLYSMCDNDSFLNSNRVPIDKMIAYLEKYFSPDTPGDDEYSLAISAGESGARLTHSHARQYNFALQSLTLWREIMHDMFRLWCLGEEDLLSETVHYKLTDTGQGKQRVQQSPRTFKAMQEILYHAQRGVKSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKDDHIKNLVDTGYGGLETLKKDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTGFDGEFQR 1785
            R SF ER+KYIP+RLT EER YLRL+ES +SV+DYTG VD +F +EN R++  ++ I+  LGGLV+AVDY  G  +++++ ++ H+ +F+DV EI RRHKIMNPEKMRTEY KMIYLMQD   P V ++L +N+ R +KSVY  L+ K GLA+L D  + +AT+E+L +  + R  I ++I+ KE AV  +KR Y +A+LS+DDIHTCLYSMCDNDSFLNSNR+PIDKMIAYL++YFSP+    + YSLAI AGE GARLTHSH RQYNFALQSLTLWREI+HDMFRLWCL E DLLS T  Y LT TGQG QRVQ  PRT KAMQEILY  Q+ VK+WVGSSVIHLGD NVPN+LMFIDKYTQVSRIL PIV CLEQL  L ++D  +   ++ GYGG+E L  DIL DFFR AFDGSGADNF++AGSCIDGRLTSAWNWCSQL+SKPF+P+F+LTGF GFDG++Q+
Sbjct:    3 RCSFVERAKYIPLRLTLEERQYLRLLESALSVSDYTGTVDREFKTENHRKHKQMEHISALLGGLVVAVDYDSGQELLEEKDFTAHDAFFQDVFEIGRRHKIMNPEKMRTEYGKMIYLMQDTCGP-VGQLLHVNVMRNIKSVYYLLQEKNGLAMLEDQYMAIATKEILPDANKSRAAINQEIKMKERAVEYLKRHYCSATLSKDDIHTCLYSMCDNDSFLNSNRLPIDKMIAYLKRYFSPENI-QEGYSLAIVAGEEGARLTHSHERQYNFALQSLTLWREIIHDMFRLWCLAELDLLSSTDPYTLTPTGQGLQRVQPCPRTHKAMQEILYLTQKEVKNWVGSSVIHLGDKNVPNSLMFIDKYTQVSRILSPIVMCLEQLAKLTEEDKGVDIYIEHGYGGVERLTMDILHDFFRCAFDGSGADNFYEAGSCIDGRLTSAWNWCSQLSSKPFYPVFKLTGFMGFDGDWQK 468          
BLAST of mRNA_S-dermatodea_contig12938.1789.1 vs. uniprot
Match: B5Y5N5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5N5_PHATC)

HSP 1 Score: 585 bits (1507), Expect = 2.650e-200
Identity = 290/487 (59.55%), Postives = 376/487 (77.21%), Query Frame = 1
Query:  322 EVNPDMYDRQPNIYLYCLRQCRKSFSERSKYIPVRLTSEERSYLRLVESVISVTDYTGKVDGDFASENKRRNLVLKQITRFLGGLVLAVDYKQGMAMIDDRGYSEHEEYFRDVLEIARRHKIMNPEKMRTEYAKMIYLMQDAVSPQVREILKLNIKRGVKSVYEFLKGKGGLAVLSDPDVEMATREVLANGRPRPQITKDIRRKETAVAQIKRRYSTASLSEDDIHTCLYSMCDNDSFLNSNRVPIDKMIAYLEKYFSPDTPGDDEYSLAISAGESGARLTHSHARQYNFALQSLTLWREIMHDMFRLWCLGEEDLLSETVHYKLTDTGQGKQRVQQSPRTFKAMQEILYHAQRGVKSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKDDHIKNLVDTGYGGLETLKKDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTGFDGEFQ 1782
            E+  D  DRQP+           +  ER+KYIP+RL+  ER  LRL+E+ ++ TDYT  VD  F S ++R +  LK +T  L GLV A DY  G  ++ D  Y+  E++FR + E+ARRHKIMNPEKMRTEY K+IYL+QDAVSP +R  L  +IK  ++SVY+FL+ + GL VLSD  +E AT E+LA  + R QI ++IR+KE AV+ IKR+Y ++ L+ +DIH CLYS+CDN+SFLNSNRVPIDK+I YL K+FSP+   ++ YSL+I +GE G+RL+HSH RQY FALQSLTLWR+I+ DMFRLW + EEDLLS++V Y L DTGQG QRVQQSP+T++AM+++L   Q  V  W+GS++IHLGDHNVPNAL FIDKYTQV RIL PIV+CLE L  L +KDD I+ ++D G+GG++ L++DIL+DFFRSAFDGSGA+NF+DAGSCIDGRLTSAWNWCSQL +KPF+P+F+LTGFTGFDG+F+
Sbjct:    2 EIRAD--DRQPS-------GSHNTVKERAKYIPLRLSLGERKMLRLMEASMTCTDYTTHVDRPFKSTSRRVHEQLKGVTSVLRGLVTACDYAAGQQLLQDDNYAHFEKFFRQMFEMARRHKIMNPEKMRTEYGKVIYLLQDAVSPSLRPHLGFSIKGPIESVYKFLEDRRGLEVLSDKLIETATEEILAGWKSRSQIDQEIRQKERAVSLIKRKYRSSLLTSEDIHLCLYSICDNNSFLNSNRVPIDKVIDYLTKHFSPEHV-EEGYSLSIVSGEDGSRLSHSHERQYYFALQSLTLWRDIVDDMFRLWAMAEEDLLSDSVSYVLQDTGQGMQRVQQSPQTYRAMRQVLVRVQSKVSHWIGSNMIHLGDHNVPNALSFIDKYTQVPRILAPIVTCLENLEQLCEKDDGIQQMIDDGFGGVKKLRQDILYDFFRSAFDGSGANNFYDAGSCIDGRLTSAWNWCSQLPTKPFYPIFKLTGFTGFDGDFK 478          
BLAST of mRNA_S-dermatodea_contig12938.1789.1 vs. uniprot
Match: A0A7S2XMA5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMA5_9STRA)

HSP 1 Score: 587 bits (1512), Expect = 2.680e-199
Identity = 290/467 (62.10%), Postives = 361/467 (77.30%), Query Frame = 1
Query:  391 SFSERSKYIPVRLTSEERSYLRLVESVISVTDYTGKVDGDFASENKRRNLVLKQITRFLGGLVLAVDYKQGMAMIDD---RGYSEHEEYFRDVLEIARRHKIMNPEKMRTEYAKMIYLMQDAVSPQVREILKLNIKRGVKSVYEFLKGKGGLAVLSDPDVEMATREVLANGRPRPQITKDIRRKETAVAQIKRRYSTASLSEDDIHTCLYSMCDNDSFLNSNRVPIDKMIAYLEKYFSPDTPGDDEYSLAISAGESGARLTHSHARQYNFALQSLTLWREIMHDMFRLWCLGEEDLLSETVHYKLTDTGQGKQRVQQSPRTFKAMQEILYHAQRGVKSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKDDHIKNLVDTGYGGLETLKKDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTGFDGEFQ 1782
            S  ERSK+IP+RL+  ER  LRLVE++++  DYT  VD  F +  +R +  LK +   L G+V A DY  G  + DD     +++ E +F  + EIARRHKIMNPEKMRTEY K+IYL+QDAVSP V   L  + K  +++VY+FL+ +GGL VL DP +E+AT+E+LA  + R  I ++IRRKE AV++IK  +   +L+ DDIH CLYS+CDN+SFLNSNRVPIDK+I YL++ F+P    D+ YSL+I +G+ GARL+HSH RQY FALQSL+LWR+I+ DMFRLW   EEDLLSET+ Y L DTGQG QRVQQSPRT+KAMQ+IL   Q  +K W+GS VIHLGDHNVPNAL FIDKYTQV RILGPIVSCLE L  +Y+ DD IK ++D G+GGLE LKKDIL+DFFRSAFDGSGADNF+DAGSCIDGR+TSAW+WCSQL SKPF+ +F+LTGFTGFDGEF+
Sbjct:  129 SVKERSKFIPLRLSIGERKMLRLVEAIMTCCDYTTDVDRLFKNAARRTHAQLKSVMAVLRGMVTACDYAAGQKLCDDDDDNHFTDFEPFFCQMFEIARRHKIMNPEKMRTEYGKLIYLLQDAVSPTVAPHLSFSCKGPIETVYKFLEARGGLGVLDDPLIEVATQEILAEKKTRANIDEEIRRKEMAVSKIKSSHRNTNLTSDDIHLCLYSICDNNSFLNSNRVPIDKVIGYLQESFAPGNI-DEGYSLSIVSGQDGARLSHSHERQYYFALQSLSLWRDIVDDMFRLWHFAEEDLLSETITYSLKDTGQGMQRVQQSPRTYKAMQQILVRVQGKMKQWIGSGVIHLGDHNVPNALSFIDKYTQVPRILGPIVSCLENLERIYENDDGIKEMIDDGFGGLECLKKDILYDFFRSAFDGSGADNFYDAGSCIDGRMTSAWHWCSQLPSKPFYSIFKLTGFTGFDGEFK 594          
BLAST of mRNA_S-dermatodea_contig12938.1789.1 vs. uniprot
Match: A0A1Z5JZ97_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JZ97_FISSO)

HSP 1 Score: 583 bits (1502), Expect = 2.410e-194
Identity = 284/464 (61.21%), Postives = 364/464 (78.45%), Query Frame = 1
Query:  391 SFSERSKYIPVRLTSEERSYLRLVESVISVTDYTGKVDGDFASENKRRNLVLKQITRFLGGLVLAVDYKQGMAMIDDRGYSEHEEYFRDVLEIARRHKIMNPEKMRTEYAKMIYLMQDAVSPQVREILKLNIKRGVKSVYEFLKGKGGLAVLSDPDVEMATREVLANGRPRPQITKDIRRKETAVAQIKRRYSTASLSEDDIHTCLYSMCDNDSFLNSNRVPIDKMIAYLEKYFSPDTPGDDEYSLAISAGESGARLTHSHARQYNFALQSLTLWREIMHDMFRLWCLGEEDLLSETVHYKLTDTGQGKQRVQQSPRTFKAMQEILYHAQRGVKSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKDDHIKNLVDTGYGGLETLKKDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTGFDGEFQ 1782
            S  ERSKYIP+RL+  ER  LRLVE+ +   DYT +VD  F+S  +R +  LK +T  L GLV A DY+    +++   YS++E +FR + EIARRHKIMNPEKMRTEY K+IYL+QDAVSP V   L  ++K  ++SVY+FL+ +GGL +LSD  +E AT E+LA GRPR  I  +IR+KE AV  +KR+Y T+ LS+DDIH CLYS+CDN+SFLNSNRVPIDK+I +L+  FSP+   ++ YSL+I +GE+G+RL+HSH RQ+ +ALQSLTLWR+I+ DMFRLW + EEDLLSE+V Y L DTGQG QRVQQSPR ++AMQE+L   +  V  WVGSSV+H+GDHNVPNAL FIDKYTQV RILGPI+SCLE L  +   D+ I ++++ G+GG+E L+KDIL+DFFRSAFDGSG+D ++DAGSC+DGRLTSAWNWCSQL  KPF+P+F+LTGFTGFDG+F+
Sbjct:  376 SVKERSKYIPLRLSLGERKMLRLVEAAMYCCDYTSEVDRCFSSGARRTHAQLKGVTSVLRGLVTACDYEAAQKLMEAENYSDYESFFRQMFEIARRHKIMNPEKMRTEYGKLIYLLQDAVSPTVMPHLGFSVKGPIESVYKFLEERGGLGLLSDELIETATIEILALGRPRSVIDTEIRKKERAVILLKRKYQTSRLSQDDIHLCLYSICDNNSFLNSNRVPIDKIIDFLKSNFSPNKI-EEGYSLSIVSGEAGSRLSHSHERQFYYALQSLTLWRDIIDDMFRLWAMAEEDLLSESVTYSLQDTGQGMQRVQQSPRAYRAMQEVLNRVRNSVGHWVGSSVVHMGDHNVPNALSFIDKYTQVPRILGPIISCLENLERICKDDEGILSMINNGFGGVEKLRKDILYDFFRSAFDGSGSDLWYDAGSCVDGRLTSAWNWCSQLQEKPFYPIFKLTGFTGFDGDFK 838          
BLAST of mRNA_S-dermatodea_contig12938.1789.1 vs. uniprot
Match: A0A7S3VBK2_9STRA (Hypothetical protein n=4 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VBK2_9STRA)

HSP 1 Score: 584 bits (1505), Expect = 3.000e-194
Identity = 280/464 (60.34%), Postives = 364/464 (78.45%), Query Frame = 1
Query:  391 SFSERSKYIPVRLTSEERSYLRLVESVISVTDYTGKVDGDFASENKRRNLVLKQITRFLGGLVLAVDYKQGMAMIDDRGYSEHEEYFRDVLEIARRHKIMNPEKMRTEYAKMIYLMQDAVSPQVREILKLNIKRGVKSVYEFLKGKGGLAVLSDPDVEMATREVLANGRPRPQITKDIRRKETAVAQIKRRYSTASLSEDDIHTCLYSMCDNDSFLNSNRVPIDKMIAYLEKYFSPDTPGDDEYSLAISAGESGARLTHSHARQYNFALQSLTLWREIMHDMFRLWCLGEEDLLSETVHYKLTDTGQGKQRVQQSPRTFKAMQEILYHAQRGVKSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKDDHIKNLVDTGYGGLETLKKDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTGFDGEFQ 1782
            S  ER+KYIP+RL+  ER  LRLVE+ ++  DYT + D  F S  +R +  +K I+  L G+V A DY  G  ++++  YSE+ ++FR + EIARRHKIMNPEKMRTEY K+IYL+QDAVSP ++  L  + K  +++VY++L+  GG+ +L DP +E+ATREVLA  + R QI+ +IRRKE AVA +K+ Y +  LS ++IH CLYS+CDNDSFLNSNRVP+DK+I YLE++FSP T  ++ YSL+I +G+ G+RL+HSH RQY FALQSLTLWR+I+ DMFRLW + E DLLSE+V Y L DTGQG QRVQQSP+T+K+MQ+IL   Q  VK W+GS+VIHLGDHNVPN+L FIDKYTQV RIL PIV+CLE +  + ++D+ +K  +D G+GG+E L+K IL+DFF+SAFDGSGADNF+DAGSCIDGRLTSAWNWCSQL  KPF+ +F+LTGFTGFDGEF+
Sbjct:  417 SVKERAKYIPLRLSMGERKMLRLVEAAMACCDYTTETDKPFKSSTRRTHAQMKHISSVLRGMVTACDYAAGQILLEEDNYSEYAKFFRQMFEIARRHKIMNPEKMRTEYGKLIYLLQDAVSPSIQPHLAFSCKGEIETVYKYLEENGGVKMLEDPLIEVATREVLAGKKSRSQISNEIRRKERAVAHLKQHYRSQHLSSENIHLCLYSICDNDSFLNSNRVPVDKVIGYLEQFFSP-TKIEEGYSLSIVSGQDGSRLSHSHERQYYFALQSLTLWRDIIDDMFRLWAMAESDLLSESVSYALQDTGQGFQRVQQSPQTYKSMQKILSRVQGKVKQWIGSNVIHLGDHNVPNSLTFIDKYTQVPRILSPIVTCLENVEKICEEDNGVKAFIDNGFGGVEQLRKGILYDFFKSAFDGSGADNFYDAGSCIDGRLTSAWNWCSQLQDKPFYCIFKLTGFTGFDGEFK 879          
BLAST of mRNA_S-dermatodea_contig12938.1789.1 vs. uniprot
Match: A0A7S2SFY1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SFY1_9STRA)

HSP 1 Score: 566 bits (1459), Expect = 4.800e-191
Identity = 285/474 (60.13%), Postives = 362/474 (76.37%), Query Frame = 1
Query:  391 SFSERSKYIPVRLTSEERSYLRLVESVISVTDYTGKVDGDFASEN-----KRRNLVLKQITRFLGGLVLAVDYKQGMAMIDDRGYSEHEEYFRDVLEIARRHKIMNPEKMRTEYAKMIYLMQDAVSPQVREILK-----LNIKRGVKSVYEFLKGKGGLAVLSDPDVEMATREVLANGRPRPQITKDIRRKETAVAQIKRRYSTASLSEDDIHTCLYSMCDNDSFLNSNRVPIDKMIAYLEKYFSPDTPGDDEYSLAISAGESGARLTHSHARQYNFALQSLTLWREIMHDMFRLWCLGEEDLLSETVHYKLTDTGQGKQRVQQSPRTFKAMQEILYHAQRGVKSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKDDHIKNLVDTGYGGLETLKKDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTGFDGEFQ 1782
            S  ERS YIP+RL+  ER  LRLVE+ ++  DYT  VD    + N     KR + +L+ IT  L GLVL+ D    +   +D G  ++  +FR + EIARRHK+MNPEKMRTEY K++Y++QDAVSP V+  L      L++   +++VY+FL  + GLA+L+DP +E+AT E+LA  + R QI  +I+RKE AV  +K+ Y ++ LS DD+H CLYSMCDNDSFLNSNRVPIDK+I YL+K+F+PD   +D YSL+I +G+ G+RL+HSH RQY FALQSLTLWR+I+ DMFRLW + E DLLSE+V Y L DTGQG QRVQQSPRT+K+MQ+IL   Q  V  WVGSSVIHLGDHNVPN+L FIDKYTQV RILGPIVSCLE L  + ++D+ I+  +++G+GGLE LKKDIL+DFF+SAFDGSGADNF+DAGSCIDGRLTSAWNWCSQL +KPF+ +F+LTGF GFDGEF+
Sbjct:  142 SIKERSIYIPLRLSMGERKMLRLVEAAMTCCDYTTLVDDVNTNNNSKSVAKRIHTILRHITSVLQGLVLSCDSNANVE--EDDGDEDYSSFFRRLFEIARRHKVMNPEKMRTEYGKLVYMLQDAVSPTVQPNLPYCKSGLSLVSPMETVYKFLSERNGLAMLNDPLMEVATEEILAGKKSRSQINSEIKRKERAVLMLKQNYKSSQLSADDVHLCLYSMCDNDSFLNSNRVPIDKIIDYLQKFFAPDKI-EDGYSLSIVSGQDGSRLSHSHERQYYFALQSLTLWRDIIDDMFRLWAMAEGDLLSESVTYSLQDTGQGMQRVQQSPRTYKSMQKILSRVQSKVSQWVGSSVIHLGDHNVPNSLSFIDKYTQVPRILGPIVSCLENLERICEEDEGIEGFIESGFGGLERLKKDILYDFFKSAFDGSGADNFYDAGSCIDGRLTSAWNWCSQLPNKPFYCIFKLTGFIGFDGEFK 612          
BLAST of mRNA_S-dermatodea_contig12938.1789.1 vs. uniprot
Match: A0A7S2V695_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V695_9STRA)

HSP 1 Score: 565 bits (1455), Expect = 2.690e-190
Identity = 309/591 (52.28%), Postives = 387/591 (65.48%), Query Frame = 1
Query:   82 VCEECEDRRSTWDCREGCGGLFCDVCFYALHRKGKRALHKPENIARPGATAGSGGGGQVGGGEGRGLLSGWI-------------GPRLPQKEEV---------NPDMYDRQPNIYLYCLRQCRKSFSERSKYIPVRLTSEERSYLRLVESVISVTDYTGKVDG-DFASENKRRNLVLKQITRFLGGLVLAVDYKQGMAMIDDRGYSEHEEYFRDVLEIARRHKIMNPEKMRTEYAKMIYLMQDAVSPQVREILKLNIKRGVKSVYEFLKGKGGLAVLSDPDVEMATREVLANGR-PRPQITKDIRRKETAVAQIKRRYSTASLSEDDIHTCLYSMCDNDSFLNSNRVPIDKMIAYLEKYFSPDTPGDDEYSLAISAGESGARLTHSHARQYNFALQSLTLWREIMHDMFRLWCLGEEDLLSETVHYKLTDTGQGKQRVQQSPRTFKAMQEILYHAQRGVKSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKDDHIKNLVDTGYGGLETLKKDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTGFDGEFQ 1782
            VCEECED  S   C E C G FC +CF  LHRKGKRA H+P+    P A                                     P    ++ V         NPD            L Q  K   ER+KYIP+RL+ EER +LRL+++ ++V DYT +VD  DF +E +R++L + ++   L G+V ++ Y++G  +   R +  +EE F+D  EI RRHKIMNPEKMR EY KMIYL+QDA      E L+ + KR V +VY  L+      +L DP++E+AT E+L +    R +I + I+RK   V    + Y++  +S +D+  CLYS+CDN SFLNSNR+PIDKMI YL KYF PD   ++ Y LAIS+GE GARLTHSH RQYNF LQSL LWREI++DMFRLW L EEDLLS+T  Y+L DTGQG+QRVQ SPRTFKAMQEILY  Q  + SWVGSSVIHLGD NVPNAL FIDKY QV+RIL PIV+ LE +  +  +D  I   ++ G+GGL  L+KDILFDFF+ AFDGSGADNFFDAGSCIDGRLTSAWNWC+QL+ KPF+P+F+LTGFTGFDGEF+
Sbjct:   49 VCEECEDNPSALVC-ELCEGYFCSLCFQILHRKGKRAGHEPKPFTIPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSPPATARDAVLAAAGGVGLNPD------------LSQYAK-MRERAKYIPLRLSYEERRFLRLLQATLTVCDYTTRVDAHDFKAEAQRQHLQMSKLCHLLTGMVTSLSYRRGQELARSRDFQGYEELFQDAFEIGRRHKIMNPEKMRGEYGKMIYLLQDAQKNS--EDLQFSCKRPVLTVYSLLEDAKAAKMLDDPNIELATEEILPDPNVSRAEIQQRIKRKNRLVEAFAKTYASRRISAEDVRLCLYSICDNKSFLNSNRLPIDKMIGYLRKYFRPDQ-WEEGYCLAISSGEGGARLTHSHERQYNFVLQSLYLWREIVNDMFRLWYLAEEDLLSDTESYRLEDTGQGRQRVQNSPRTFKAMQEILYCTQVKLGSWVGSSVIHLGDRNVPNALTFIDKYAQVARILLPIVNTLELVEKICKEDSGISYYIEHGFGGLGKLRKDILFDFFQKAFDGSGADNFFDAGSCIDGRLTSAWNWCAQLSQKPFYPIFKLTGFTGFDGEFK 622          
BLAST of mRNA_S-dermatodea_contig12938.1789.1 vs. uniprot
Match: A0A4D9DBV6_9STRA (B box-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBV6_9STRA)

HSP 1 Score: 562 bits (1449), Expect = 2.390e-188
Identity = 309/603 (51.24%), Postives = 394/603 (65.34%), Query Frame = 1
Query:   82 VCEECEDRRSTWDCREGCGGLFCDVCFYALHRKGKRALHKP---ENIARPGATAGSGGGG-----------------QVGGGEGRGLLSGWIGPRLPQKEEVN-P--DMYDRQPNIYLYC-----LRQCR-------KSFSERSKYIPVRLTSEERSYLRLVESVISVTDYTGKVDGDFASENKRRNLVLKQITRFLGGLVLAVDYKQGMAMIDDRGYSEHEEYFRDVLEIARRHKIMNPEKMRTEYAKMIYLMQDAVSPQVREILKLNIKRGVKSVYEFLKGKGGLAVLSDPDVEMATREVLANGRP-RPQITKDIRRKETAVAQIKRRYSTASLSEDDIHTCLYSMCDNDSFLNSNRVPIDKMIAYLEKYFSPDT--PGDDEYSLAISAGESGARLTHSHARQYNFALQSLTLWREIMHDMFRLWCLGEEDLLS-ETVHYKLTDTGQGKQRVQQSPRTFKAMQEILYHAQRGVKSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKDDHIKNLVDTGYGGLETLKKDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTGFDG 1773
            VCEECE   + W C + C    C +CF  LHRKGKRALH+    E++A       +G GG                 QV                 P K+  N P  + +   P+          +  C+       +S  +R+K IP+RL+ E+R  L LV++ ++  DYT +VD  F S   R    LKQIT  L  LVL+ DY +G  +++++ Y  H  +F+   E+ARRHKIMNPEKMR  Y K+ YL+QDA+SP +R  L +++   +++VY  L+ K GL +L DP +  AT+E+L + R  R QI ++I+RKE A+    R Y+T  L  +DI  CLYS+CDN+SFLNSNR+PIDKMIAYL +YFS     PG   YSL+I  G++GARLTHSH RQ+NFALQSLTLWREI  DMFR WCL EEDLLS +   Y L DTGQG  RVQ  PRT+ AMQ++L+  QR V SWVGSSVIHLGDHNVPNALMFIDKYTQV RIL PIV CLEQ+ V+ ++D+ ++NLV+  Y GL TLKKDIL+DFF++AFDGSG DNF+DAGSCIDGRLTSAWNWCSQL+SKPF+P+F+LTGF  FD 
Sbjct:   91 VCEECECDPALWVC-DTCEMDLCTMCFDVLHRKGKRALHRKRPRESMAVQETAFSNGDGGVTPPTPHTIPHVLTLTEQVSSSXXXXXXXXXXXXXAPSKKSSNFPTFNFWSSSPSXXXXTSPPLPVHPCQLPPLGSSQSMRDRAKSIPLRLSFEQRKTLHLVQATLTACDYTARVDRHFKSLPHREQAQLKQITGVLQALVLSEDYAKGRVLVEEQDYERHALFFQRCFEVARRHKIMNPEKMRGAYGKLSYLLQDALSPALRRHLHVHVVGRLQTVYALLEEKDGLRLLDDPLIHTATQEILPDKRKSRAQIQQEIKRKERAIETFVRAYTTPCLEAEDIRLCLYSICDNNSFLNSNRLPIDKMIAYLLQYFSSSKVEPG---YSLSILQGQAGARLTHSHERQFNFALQSLTLWREITDDMFRFWCLAEEDLLSSQGPPYTLRDTGQGLHRVQHCPRTYHAMQDLLHKTQRRVGSWVGSSVIHLGDHNVPNALMFIDKYTQVPRILAPIVQCLEQIEVIVEEDEGVRNLVNRNYKGLATLKKDILYDFFKTAFDGSGGDNFYDAGSCIDGRLTSAWNWCSQLSSKPFYPIFKLTGFASFDS 689          
BLAST of mRNA_S-dermatodea_contig12938.1789.1 vs. uniprot
Match: A0A7R9UCK5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCK5_9STRA)

HSP 1 Score: 556 bits (1433), Expect = 7.210e-187
Identity = 295/588 (50.17%), Postives = 396/588 (67.35%), Query Frame = 1
Query:   46 AAGEDATDTAVL-----VCEECEDRRSTWDCREGCGGLFCDVCFYALHRKGKRALHKPENIARPGATAGSGGGGQVGGGEGRGLLSGWIGPRLPQKEEVNPDMYDRQPNIYLYCLRQCRKSFSERSKYIPVRLTSEERSYLRLVESVISVTDYTGKVDGDFASENKRRNLVLKQITRFLGGLVLAVDYKQGMAMIDDRGYSEHEEYFRDVLEIARRHKIMNPEKMRTEYAKMIYLMQDAVSPQVREILKLNIKRGVKSVYEFLKGKGGLAVLSDPDVEMATREVLAN-GRPRPQITKDIRRKETAVAQIKRRY---STASLSEDDIHTCLYSMCDNDSFLNSNRVPIDKMIAYLEKYFSPDTPGDDEYSLAISAGESGARLTHSHARQYNFALQSLTLWREIMHDMFRLWCLGEEDLLSETVHYKLTDTGQGKQRVQQSPRTFKAMQEILYHAQRGVKSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIVSCLEQLVVLYDKDDHIKNLVDTGYGGLETLKKDILFDFFRSAFDGSGADNFFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTGFDGEFQ 1782
            A  E A   +VL     +CEECEDR++  +C + C G FC++C  +LHRKGKRA H+          A                      PR   +E+V                 + R++  ER+K+IP+RL   ER  LR+VE+ +  +DY  +VD  FASE KRR++ LK I  FL GL  +V Y+ G  ++++R +SE+  +F++ +EI RR+KIMNPEKMR EY K++++MQDA+S Q+ ++L  ++K  +K+VY  L+    L +L DP +E AT+EVL +  R R +I  DI+RK  A+  + ++Y   S+ S   + +  CLYS+ DN+SFLN+NR+P++KMI  LE YF+  T  ++ YSLAI  G  GARLTH+H RQ+NF  QSL LW EI+ D FRLW L EEDLLS TV Y L DTGQG QRVQQ PRTF+AMQEIL+     V SW+GSSV+HLGDHNVPNAL+FIDKY QVSRILGP+++ LEQ+  +YD+D   + LVD G+GGL+ ++K+IL+DFFR AFDGSGADNF+DAGSCIDGRLTSAWNWCSQ+NSKP+ P+F+LTG  GFDG+F+
Sbjct:   81 AQAEAAASVSVLSVDPSLCEECEDRKAVHECLD-CDGRFCELCLRSLHRKGKRARHRFCVFESDVKQA----------------------PREIAREQVRA--------------AEGRRNMRERAKFIPLRLEYTERKLLRMVEAALRASDYVTEVDRPFASEAKRRHVQLKGICAFLCGLATSVQYEAGQRLLEERCFSEYAGFFQECMEILRRYKIMNPEKMRNEYGKLLFMMQDAMSGQIHQLLGFDLKGPIKTVYSRLEELDALEMLDDPLIETATQEVLPDRSRSRAEIQTDIKRKNRAIEILVKKYWRGSSRSEEAEAVRLCLYSIADNNSFLNANRLPVEKMIVKLEHYFNAQTV-EEGYSLAIQEGLQGARLTHNHERQFNFVKQSLKLWSEILLDFFRLWYLAEEDLLSGTVAYSLEDTGQGFQRVQQCPRTFRAMQEILFTVMDRV-SWIGSSVVHLGDHNVPNALVFIDKYAQVSRILGPVINTLEQMRRIYDEDPATEVLVDQGFGGLDKVEKEILYDFFRYAFDGSGADNFYDAGSCIDGRLTSAWNWCSQINSKPYVPIFRLTGNQGFDGDFR 629          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12938.1789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW41_ECTSI0.000e+081.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z3Z0_9STRA4.020e-21565.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B5Y5N5_PHATC2.650e-20059.55Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2XMA5_9STRA2.680e-19962.10Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A1Z5JZ97_FISSO2.410e-19461.21Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3VBK2_9STRA3.000e-19460.34Hypothetical protein n=4 Tax=Chaetoceros debilis T... [more]
A0A7S2SFY1_9STRA4.800e-19160.13Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2V695_9STRA2.690e-19052.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9DBV6_9STRA2.390e-18851.24B box-type domain-containing protein n=1 Tax=Nanno... [more]
A0A7R9UCK5_9STRA7.210e-18750.17Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12938contigS-dermatodea_contig12938:185..6757 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score984.2
Seed ortholog evalue2.7e-284
Seed eggNOG ortholog2880.D7FW41
EggNOG free text desc.Protein of unknown function (DUF2009)
EggNOG OGs28J77@1,2QRJJ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein of unknown function DUF2009
Ec32 orthologEc-01_003290.1
Exons11
Model size2342
Cds size1788
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12938.1789.1prot_S-dermatodea_contig12938.1789.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig12938 739..6757 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924268.26831-UTR-S-dermatodea_contig12938:184..7381622924268.26831-UTR-S-dermatodea_contig12938:184..738Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12938 185..738 -
1694079138.2347023-UTR-S-dermatodea_contig12938:184..7381694079138.2347023-UTR-S-dermatodea_contig12938:184..738Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig12938 185..738 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924268.2809377-CDS-S-dermatodea_contig12938:738..8591622924268.2809377-CDS-S-dermatodea_contig12938:738..859Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 739..859 -
1694079138.245804-CDS-S-dermatodea_contig12938:738..8591694079138.245804-CDS-S-dermatodea_contig12938:738..859Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 739..859 -
1622924268.2898612-CDS-S-dermatodea_contig12938:1235..14291622924268.2898612-CDS-S-dermatodea_contig12938:1235..1429Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 1236..1429 -
1694079138.2570896-CDS-S-dermatodea_contig12938:1235..14291694079138.2570896-CDS-S-dermatodea_contig12938:1235..1429Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 1236..1429 -
1622924268.2985067-CDS-S-dermatodea_contig12938:1967..20811622924268.2985067-CDS-S-dermatodea_contig12938:1967..2081Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 1968..2081 -
1694079138.2687345-CDS-S-dermatodea_contig12938:1967..20811694079138.2687345-CDS-S-dermatodea_contig12938:1967..2081Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 1968..2081 -
1622924268.309481-CDS-S-dermatodea_contig12938:2523..26821622924268.309481-CDS-S-dermatodea_contig12938:2523..2682Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 2524..2682 -
1694079138.2774858-CDS-S-dermatodea_contig12938:2523..26821694079138.2774858-CDS-S-dermatodea_contig12938:2523..2682Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 2524..2682 -
1622924268.3182852-CDS-S-dermatodea_contig12938:2877..30611622924268.3182852-CDS-S-dermatodea_contig12938:2877..3061Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 2878..3061 -
1694079138.2868938-CDS-S-dermatodea_contig12938:2877..30611694079138.2868938-CDS-S-dermatodea_contig12938:2877..3061Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 2878..3061 -
1622924268.3258975-CDS-S-dermatodea_contig12938:3548..36311622924268.3258975-CDS-S-dermatodea_contig12938:3548..3631Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 3549..3631 -
1694079138.2944624-CDS-S-dermatodea_contig12938:3548..36311694079138.2944624-CDS-S-dermatodea_contig12938:3548..3631Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 3549..3631 -
1622924268.3340552-CDS-S-dermatodea_contig12938:3854..39961622924268.3340552-CDS-S-dermatodea_contig12938:3854..3996Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 3855..3996 -
1694079138.3023136-CDS-S-dermatodea_contig12938:3854..39961694079138.3023136-CDS-S-dermatodea_contig12938:3854..3996Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 3855..3996 -
1622924268.344099-CDS-S-dermatodea_contig12938:4292..43601622924268.344099-CDS-S-dermatodea_contig12938:4292..4360Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 4293..4360 -
1694079138.3098626-CDS-S-dermatodea_contig12938:4292..43601694079138.3098626-CDS-S-dermatodea_contig12938:4292..4360Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 4293..4360 -
1622924268.352949-CDS-S-dermatodea_contig12938:4724..48951622924268.352949-CDS-S-dermatodea_contig12938:4724..4895Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 4725..4895 -
1694079138.3173072-CDS-S-dermatodea_contig12938:4724..48951694079138.3173072-CDS-S-dermatodea_contig12938:4724..4895Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 4725..4895 -
1622924268.362046-CDS-S-dermatodea_contig12938:5316..55171622924268.362046-CDS-S-dermatodea_contig12938:5316..5517Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 5317..5517 -
1694079138.324885-CDS-S-dermatodea_contig12938:5316..55171694079138.324885-CDS-S-dermatodea_contig12938:5316..5517Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 5317..5517 -
1622924268.3762484-CDS-S-dermatodea_contig12938:6406..67571622924268.3762484-CDS-S-dermatodea_contig12938:6406..6757Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 6407..6757 -
1694079138.332386-CDS-S-dermatodea_contig12938:6406..67571694079138.332386-CDS-S-dermatodea_contig12938:6406..6757Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig12938 6407..6757 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig12938.1789.1

>prot_S-dermatodea_contig12938.1789.1 ID=prot_S-dermatodea_contig12938.1789.1|Name=mRNA_S-dermatodea_contig12938.1789.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=596bp
MDVDDDAPMTNGGVDAAGEDATDTAVLVCEECEDRRSTWDCREGCGGLFC
DVCFYALHRKGKRALHKPENIARPGATAGSGGGGQVGGGEGRGLLSGWIG
PRLPQKEEVNPDMYDRQPNIYLYCLRQCRKSFSERSKYIPVRLTSEERSY
LRLVESVISVTDYTGKVDGDFASENKRRNLVLKQITRFLGGLVLAVDYKQ
GMAMIDDRGYSEHEEYFRDVLEIARRHKIMNPEKMRTEYAKMIYLMQDAV
SPQVREILKLNIKRGVKSVYEFLKGKGGLAVLSDPDVEMATREVLANGRP
RPQITKDIRRKETAVAQIKRRYSTASLSEDDIHTCLYSMCDNDSFLNSNR
VPIDKMIAYLEKYFSPDTPGDDEYSLAISAGESGARLTHSHARQYNFALQ
SLTLWREIMHDMFRLWCLGEEDLLSETVHYKLTDTGQGKQRVQQSPRTFK
AMQEILYHAQRGVKSWVGSSVIHLGDHNVPNALMFIDKYTQVSRILGPIV
SCLEQLVVLYDKDDHIKNLVDTGYGGLETLKKDILFDFFRSAFDGSGADN
FFDAGSCIDGRLTSAWNWCSQLNSKPFFPMFQLTGFTGFDGEFQR*
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mRNA from alignment at S-dermatodea_contig12938:185..6757-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig12938.1789.1 ID=mRNA_S-dermatodea_contig12938.1789.1|Name=mRNA_S-dermatodea_contig12938.1789.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6573bp|location=Sequence derived from alignment at S-dermatodea_contig12938:185..6757- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGACGTGGACGACGATGCCCCCATGACCAACGGTGGGGTGGATGCGGC CGGCGAGGACGCCACCGACACAGCCGTCCTTGTTTGTGAGGAATGCGAGG ACAGACGCAGCACATGGGACTGTCGGGAGGGCTGTGGAGGACTCTTCTGT GATGTGTGCTTCTACGCCCTGCATCGGAAGGGAAAGAGGGCCCTGCACAA GCCAGAGAACATAGCTCGCCCCGGAGCAACCGCAGGGAGTGGTGGCGGTG GGCAAGTGGGGGGTGGCGAGGGGAGAGGACTGTTGAGTGGGTGGATCGGA CCCCGATTGCCTCAGAAGGAAGAGGTCAACCCGGATATGTACGACAGGCA AGTCCGCGTTATCTCATAATCGTATACCAAATATGCAACAGCTGTGCGCT GTGGTGTTGGAGATGTAACTGCTCTGGTGCTCTAGACGGGCCAGCTTTGC GTCATTTTGTCACTGCGCACAAGTTCGTGGAGTGCGGCTTGTGCTCGCTC GTCCGTCGCATCCGACTGCTGTATCCCACGTCGCACTTGTACTTCCACGT TCAAACCTCGACCTTCCCGAAAATGTGTTCTCCACGTACCGTACTCGTAC AAATAGAGCTCTATACAACTACTGTACACATGTACTCTGTCCGTACTTGT ACCCCGTACAAGTAGCCGCAGTCCGTGGACCTCCAAAGTAGTAGGACGTC ATCGACGATGCGATCGCCAGTGAGCGGTCCGCGGCGGAGAGATCAACTGT AGTACGAAGAGATGCACTGATTATCCTACCTTCGAGTGCCGTGGTGTATA GAGCAGTATCACACTCGCTATTCATGAGAATGAGGTAATGCCACTCTCAT ACACGACACAACATGAGCACAATAGTGGTCTAATCGCCGTTCGGCTGCGC TGGCGGTGTTGGGAGCCAAAGAGAGAGGCAAGGATTCGTTCCATCCGTTT GATGCTGATCCTATGAATTCCTGTGGAACAGGAGATACACAGGGATAGGT GCGGGGCGACTGTTGTTGTCGTAGTTGGCGCGTGTGTTCCACCACGCACT ACCGAGTAATACTATACGTGGGTCACAGGCTTTGGCGGATCCCTTTCCGT TTCTCTCGTCCAGTTTCCCTTAACCCCTTAAACCGAGGTAAAACAGTTGT TAATCGCAGGTAAATACTGCCGCGCGTGGCAGCCCGAGAAACCGCTCATT TTTATATGCATCGCTCTACGCGAGTCACTCCTCTCACGAGCCGAACATCT ACCTTTACTGCTTACGACAATGCAGGAAATCGTTCTCGGAGCGATCTAAG TACATCCCGGTACGCCTAACATCGGAAGAGCGCTCGTACTTGCGACTGGT GGAGTCGGTGATATCGGTGACGGACTACACGGGCAAGGTGGATGGCGACT TCGCCTCCGAAAACAAGCGGCGAAACCTCGTACTCAAGCAGGTGTGGTAG ATACTGGCCTCGTGGGAGGAATGGCTTGCGTATGCTTATGATAGCTAAGG CGCCGTTCCCGCACCAACCCTGGATAACCCCTTTACATTCGATGATGAGC GTCAACCGCGGTACTCATGTTTAGTCCTCTGAAAATATCTAATTGGTAAT ATACATGTAGGTATGTAACGTAGATTACTCTCTGTCTTGTGGCTGCCGCT GATTGGGCAGACTAACATACCGCCACCTACCAATCCTTGACCTTTACTAG GTGGTTGATGTTTTGCCCTACTGCCGTGTTCATGTCCGTGTGTACCCTGG CCGCGAAAAGAGATTCGCAACCTGGTTTGCCTGCTAGTTGCCTGCGTATT AACGGGCGTCCCCTGATGTTCGTGGTTGCGCTACTCATACTATATGCAAT GTATATCGCCAGATCACACGATTCTTGGGCGGACTGGTGCTAGCCGTGGA CTACAAGCAGGGCATGGCGATGATAGACGATCGAGGGTACAGCGAGCACG AGGAGTACTTCCGGGACGTACTGGAGATCGCTCGAAGGCACAAGATCATG AACCCCGAGAAGATGCGCACGGAGTACGCTAAGGTGGGCCTGGCATTCGT GTGTACTTTCTGCGCTTCGGTGTTGGCGGCTTGCGCTCGCGTGGGCATGA CTCGAGATTTTCTTGGGTGAATCCTCTTTTGCTGGACAGCGTTTTTAGTA ATTCACCAGCGGACCAATCGTTGTTCGCACGGCGTATTTCGCTGCGTGCT CGTTCTGATGGACGTACTATTGTGGTTTCGGGGCACTCACTCAATACGCT ATCGTGGGAATCATTTCGCTATCGTAGCGGGATTGGTGCTATAGCTGTGG ATTATTTTGTTCTCCCCAGAAAATGGTATCGCAGGTGGCCACTGCTCTCA TCCCACGTGACCATCCTCGCTCACCCTCGGTAATCCTTGGCGCGCAGATG ATCTACCTGATGCAAGATGCTGTGTCTCCGCAAGTGCGGGAAATCCTCAA GTTAAATATCAAGAGGTGCGTCAGATTAAAGCCGCGCAGTACTGTCGACC CATGAATGGGAGGATGACAGGCGCACTTGCATTTCAAGCAGGAGATCCAG TTGCCAGTTGCGAGCACGTCGGGTCCCTGCTAAAACTAAGGCCGTCATGC CATTTGTGCAGGAACGATTCGTGATTACCCTCCGGCATCATACCGTGTGC GGCTACTCAGCGTGCCACACTTGCTGGCGAGAAGCAGGGCTGCCGTGCTC TGAATGTCTTAATCTGACCTCGGTGGTTGGTGTCTACGGATGAACTGTTC TCGCTGTTCAGGGGAGTGAAGTCGGTGTACGAATTCTTGAAAGGGAAAGG CGGCCTGGCAGTCCTGAGCGACCCGGACGTGGAGATGGCCACAAGAGAAG TTTTGGCCAACGGCAGACCGCGACCGCAGATCACCAAGGACATTAGAAGA AAGGTGCGTTGCCGTTGTCGCTCGCACTGCACTTGTTGTTGCAAGACTTG CTCCAGGAGTCACACACGGTCGACACGCACAATGCATATTTTCGATACCT CGCGGCCCATATGCTCCAGTTAGTTGCTTTTGCTTTTGGCGGTGGCATGA TCCTACTCGTGCGTGACGAACTCCGCGTACCTTGTGTCAACTCGGGTGGC GCTGGCATCTGTTGTGTGAAATGCAGGAAACCGCGGTGGCTCAGATTAAG CGTCGCTACTCTACCGCCAGCCTGTCGGAGGATGACATCCACACCTGCCT CTACAGCATGTGAGACTTGCGAACTGTCCCCACTCGTACGGGGCAGGCAG CGAGGGGTGTTTCGCTTTCGTGATATGGCAGGTTCTGGTCTTGACCTCCG TTCAGGAGGCGAAACCTGGCGAGCGGTATTGCTGATAAGTAGGTGGAGAC GTCGTGCGCGGACGGTGTTTGTAGAGTCCCCGCTCGACGCATCGCAGCAA CAAACATGTCCGCATTTAGGGCCTTGCCGCGACTCGTGAGCCTTGCGGTT CCTCCGAGGAATGCGCACGGAGAGGTAATTTTGAACACCTCGGAGGCTCG AGTACACGCGTAACAGGGGGGGCGGCTCATCTCTTCTTCCGCACCAAGGT GGCCAACGGCGTCCGCACTCGTAGCTACCACTGCGTTTTTTCCACCCTTC CTTTGTGCATTTCACCCTGCTATGTCTCGCTCGCTTCCTCTTGCACGTCA TGCTCCTGCAAAAATGCGCTCGCCGTGGCGACTCGACACTGTGCAGGTGC GACAACGACTCCTTCCTCAACTCCAACCGCGTGCCTATCGACAAGATGAT AGCGTACCTCGAGAAGTACTTCTCCCCGGACACGCCGGGAGACGACGAGT ACTCGCTGGCTATCTCGGCGGGGGAGAGCGGGGCGCGCTTGACGCACTCT CATGCGCGGCAGTACAACTTTGCCCTGCAGGTGATAATAACTTCGCACAA ACTGCAAGCCGTCTGTAGACCGTGAAGTCGTAGACTGCGGTGAAGTGTAG CCAGCAGAAAGCGGTAAACGAGGTACGAGCACGGGATGAGCATGCACACG TCGTCCGATTCCCGAGGTTGATGATTGTTTGGCGTATCGTGCAACCTTGC CGCCGTGCACCGTGCTCCTTGCCAGTCGTTGACACTCTGGCGAGAGATCA TGCACGACATGTTTCGCCTGTGGTGCCTGGGGGAGGAAGACCTGCTTTCG GAGACCGTGCATTACAAGCTCACGGATACGGGACAGGGCAAGCAGCGGGT GCAGCAGAGCCCCCGCACTTTCAAGGCCATGCAGGTTGGATGCCGTCGGT CGCCAAAGAGTCTGGCTATTTATTTCCAGGTTACCTGTTCTTCGTGTCGC CAAGAGTCACGAAAATGAACAACGGCACACGTTGCTGTTGTTTGCGGGGG CTAAGCTTGTATTTACTATAGGGTGTCACGTGTAGCAGTATTGAGGGTTC AGCAATTACCCCAGCAGCAAATGGTCTGAAGATGGGTGCTAGCCTATAGC AAGTTTTTAAACGGTGAATTTCCCGCGGTTTAGGTGTGCGCAAAAAATTG GAACATCGCGAGTTGTAGTATTGTTTTCGCCGCTTCTCCGGCTATGTTAG GATTAACGATCCTTCTCGAGCGTGTATGTAGGAAGCACGTGCTTTCCCGC GCTGCACTATTCATAAATTCGTTTCACTTGAACAAAAAAAGTTAACCCAG ACGTTGCTCGCCCGAACACTCTGCAGGAGATCCTGTACCACGCACAACGC GGCGTGAAGAGCTGGGTAGGAAGCAGCGTCATCCATCTTGGCGACCATAA CGTGCCGAACGCCCTCATGTTCATCGACAAGTACACGCAGGTGCGTCCTG GTACACGATATACCTGTCTAGCAACACCTTGTGTAATTATTCTGCGTTCC TCTGCCGCAAAGAGCTGTCGGCGTTTCATTTAGTATCGTAAGAGACTCTT TCACGCTGGTGCTGTAAACACCAGACTGAATGAACATTACATTATGCCGC AACAGTCGTCTTTGTCGTACGCACGTATGCACGGCGTTGTGACGCGCATA AGCGCCTATCAATAGCGTATCCCAGCCTTCGTCACCTCGTGCGAGGATGT TTTATGTTTTGTTGGGTCGGTTGGCTCTTGTCGTTACTGGGGCATGTGGT AAAGTAGGAGGTACATAGCGTTCGGAGTCGATTATAACATGGGACAAATC GTTAAATTCAAGACGCACCACAAATCGTTGATTTGCGGTGCGCCAGAGCT ACTTATCCGACTTATTGCTTGCAAGATTGGCCGCGGCTCTGTCGGCTCAG TTCTGCTATCGGGGTGTTGCTTCGGAGGATCAACATTGGTTGCATTGCGA TCGCGTTTCCCCTCCTCGCATTTTACAGGTATCGCGCATCCTGGGGCCGA TCGTGTCATGTCTGGAGCAGCTCGTGGTGCTGTACGACAAGGACGACCAC ATAAAGAATCTCGTAGACACGGGGTACGGCGGACTGGAGACTTTGAAGAA GGACATTCTCTTTGACTTCTTTCGGTCGGCATTCGACGGCAGCGGTGCCG ACAACTTCTTCGATGCGGGCAGGTATCATACGACGCGAAAGGAATTACTA TACTGGCTGTCTTTGCGTGTACTCGTTCACTTCGTATCAGTCTCTACGGC GGTACACGCCGTCCCTCCCTTCGCGAGTACTGGATTGGGACTATTTGTGA CTACTTGTACCTGTATGACTTCCGTGAGTATCGGGCATTTAATTGTTGTC AGGCCGTGGCCATCGTCGTGAACGCTGCTGCTGGTGGTAATTACTTCGGT GTGCCCCCTCGTCTCTCCTTTGACGTGCATGCATTCCTATGATTCACTGT CAAATATGACACGACAACTGTCGTGGTTGATTTTTTATACCCCCCGTCGC TTGGTGTTACACCGCACCCCCTCCCCCCCCGCCCGCGTGCTTCTGCAGTT GCATCGATGGTCGACTAACCTCGGCATGGAACTGGTGCTCCCAGCTCAAC TCCAAGCCGTTCTTCCCCATGTTCCAGCTCACGGGGTTCACTGGTTTCGA CGGAGAGTTCCAGCGATGAAGGATCTATACAGTATCTATGTTTTGGTTGC CGTTGCATTGTGTTGGCGTTGCTTCTCGGCGGGGTGCCGCAAGCATGCAT TCCGTCGGCTGTAATTTTTTATGAGAATTGACGCGAGGTGTCGTGGACGA TGCTCTAAAGCGCTGGCGTATCGCCCTTCGTTGAGGGCTCTTGTGTTTTG TACAAGGTATATCTCTAGTTTATGTGAGTCTGGGTTGAGAGGTCCGGCGG GTATGTGAGTGGTGGAGCGGGAGGTTCCTCACACTACTCAAGCATAACTA CTCCGGCATAAAATAAGAGCGCGTACGGGATACGGCGATTTGCGTGCGTA TCATACCATTCTACTGGGAACGTCGCAGCGTTTGCTTTCGAGCGCATTGC TGTGTGCATTCTCTGGGTACACACGCTGTGCGCGTCCCGATGTGTCGCAC AGCCGTCATTCATGAACCTCCTCCTCGCACACGCGTGGCTCAGGTATGTA TATAATATCATAGGGCTACGGGAATATAGGGGTCTGCGAATCAAACGTGA TTTAAAACAAAGTTTGTAACAAT
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Coding sequence (CDS) from alignment at S-dermatodea_contig12938:185..6757-

>mRNA_S-dermatodea_contig12938.1789.1 ID=mRNA_S-dermatodea_contig12938.1789.1|Name=mRNA_S-dermatodea_contig12938.1789.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3576bp|location=Sequence derived from alignment at S-dermatodea_contig12938:185..6757- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGACGTGGACGACGATGCCCCCATGACCAACGGTGGGGTGGATGCGGC
CGGCGAGGACGCCACCGACACAGCCGTCCTTGTTTGTGAGGAATGCGAGG
ACAGACGCAGCACATGGGACTGTCGGGAGGGCTGTGGAGGACTCTTCTGT
GATGTGTGCTTCTACGCCCTGCATCGGAAGGGAAAGAGGGCCCTGCACAA
GCCAGAGAACATAGCTCGCCCCGGAGCAACCGCAGGGAGTGGTGGCGGTG
GGCAAGTGGGGGGTGGCGAGGGGAGAGGACTGTTGAGTGGGTGGATCGGA
CCCCGATTGCCTCAGAAGGAAGAGGTCAACCCGGATATGTACGACAGGCA
AATGGACGTGGACGACGATGCCCCCATGACCAACGGTGGGGTGGATGCGG
CCGGCGAGGACGCCACCGACACAGCCGTCCTTGTTTGTGAGGAATGCGAG
GACAGACGCAGCACATGGGACTGTCGGGAGGGCTGTGGAGGACTCTTCTG
TGATGTGTGCTTCTACGCCCTGCATCGGAAGGGAAAGAGGGCCCTGCACA
AGCCAGAGAACATAGCTCGCCCCGGAGCAACCGCAGGGAGTGGTGGCGGT
GGGCAAGTGGGGGGTGGCGAGGGGAGAGGACTGTTGAGTGGGTGGATCGG
ACCCCGATTGCCTCAGAAGGAAGAGGTCAACCCGGATATGTACGACAGGC
AACCGAACATCTACCTTTACTGCTTACGACAATGCAGGAAATCGTTCTCG
GAGCGATCTAAGTACATCCCGGTACGCCTAACATCGGAAGAGCGCTCGTA
CTTGCGACTGGTGGAGTCGGTGATATCGGTGACGGACTACACGGGCAAGG
TGGATGGCGACTTCGCCTCCGAAAACAAGCGGCGAAACCTCGTACTCAAG
CAGCCGAACATCTACCTTTACTGCTTACGACAATGCAGGAAATCGTTCTC
GGAGCGATCTAAGTACATCCCGGTACGCCTAACATCGGAAGAGCGCTCGT
ACTTGCGACTGGTGGAGTCGGTGATATCGGTGACGGACTACACGGGCAAG
GTGGATGGCGACTTCGCCTCCGAAAACAAGCGGCGAAACCTCGTACTCAA
GCAGATCACACGATTCTTGGGCGGACTGGTGCTAGCCGTGGACTACAAGC
AGGGCATGGCGATGATAGACGATCGAGGGTACAGCGAGCACGAGGAGTAC
TTCCGGGACGTACTGGAGATCGCTCGAAGGCACAAGATCATGAACCCCGA
GAAGATGCGCACGGAGTACGCTAAGATCACACGATTCTTGGGCGGACTGG
TGCTAGCCGTGGACTACAAGCAGGGCATGGCGATGATAGACGATCGAGGG
TACAGCGAGCACGAGGAGTACTTCCGGGACGTACTGGAGATCGCTCGAAG
GCACAAGATCATGAACCCCGAGAAGATGCGCACGGAGTACGCTAAGATGA
TCTACCTGATGCAAGATGCTGTGTCTCCGCAAGTGCGGGAAATCCTCAAG
TTAAATATCAAGAGATGATCTACCTGATGCAAGATGCTGTGTCTCCGCAA
GTGCGGGAAATCCTCAAGTTAAATATCAAGAGGGGAGTGAAGTCGGTGTA
CGAATTCTTGAAAGGGAAAGGCGGCCTGGCAGTCCTGAGCGACCCGGACG
TGGAGATGGCCACAAGAGAAGTTTTGGCCAACGGCAGACCGCGACCGCAG
ATCACCAAGGACATTAGAAGAAAGGGGAGTGAAGTCGGTGTACGAATTCT
TGAAAGGGAAAGGCGGCCTGGCAGTCCTGAGCGACCCGGACGTGGAGATG
GCCACAAGAGAAGTTTTGGCCAACGGCAGACCGCGACCGCAGATCACCAA
GGACATTAGAAGAAAGGAAACCGCGGTGGCTCAGATTAAGCGTCGCTACT
CTACCGCCAGCCTGTCGGAGGATGACATCCACACCTGCCTCTACAGCATG
AAACCGCGGTGGCTCAGATTAAGCGTCGCTACTCTACCGCCAGCCTGTCG
GAGGATGACATCCACACCTGCCTCTACAGCATGTGCGACAACGACTCCTT
CCTCAACTCCAACCGCGTGCCTATCGACAAGATGATAGCGTACCTCGAGA
AGTACTTCTCCCCGGACACGCCGGGAGACGACGAGTACTCGCTGGCTATC
TCGGCGGGGGAGAGCGGGGCGCGCTTGACGCACTCTCATGCGCGGCAGTA
CAACTTTGCCCTGCAGGTGCGACAACGACTCCTTCCTCAACTCCAACCGC
GTGCCTATCGACAAGATGATAGCGTACCTCGAGAAGTACTTCTCCCCGGA
CACGCCGGGAGACGACGAGTACTCGCTGGCTATCTCGGCGGGGGAGAGCG
GGGCGCGCTTGACGCACTCTCATGCGCGGCAGTACAACTTTGCCCTGCAG
TCGTTGACACTCTGGCGAGAGATCATGCACGACATGTTTCGCCTGTGGTG
CCTGGGGGAGGAAGACCTGCTTTCGGAGACCGTGCATTACAAGCTCACGG
ATACGGGACAGGGCAAGCAGCGGGTGCAGCAGAGCCCCCGCACTTTCAAG
GCCATGCAGTCGTTGACACTCTGGCGAGAGATCATGCACGACATGTTTCG
CCTGTGGTGCCTGGGGGAGGAAGACCTGCTTTCGGAGACCGTGCATTACA
AGCTCACGGATACGGGACAGGGCAAGCAGCGGGTGCAGCAGAGCCCCCGC
ACTTTCAAGGCCATGCAGGAGATCCTGTACCACGCACAACGCGGCGTGAA
GAGCTGGGTAGGAAGCAGCGTCATCCATCTTGGCGACCATAACGTGCCGA
ACGCCCTCATGTTCATCGACAAGTACACGCAGGAGATCCTGTACCACGCA
CAACGCGGCGTGAAGAGCTGGGTAGGAAGCAGCGTCATCCATCTTGGCGA
CCATAACGTGCCGAACGCCCTCATGTTCATCGACAAGTACACGCAGGTAT
CGCGCATCCTGGGGCCGATCGTGTCATGTCTGGAGCAGCTCGTGGTGCTG
TACGACAAGGACGACCACATAAAGAATCTCGTAGACACGGGGTACGGCGG
ACTGGAGACTTTGAAGAAGGACATTCTCTTTGACTTCTTTCGGTCGGCAT
TCGACGGCAGCGGTGCCGACAACTTCTTCGATGCGGGCAGGTATCGCGCA
TCCTGGGGCCGATCGTGTCATGTCTGGAGCAGCTCGTGGTGCTGTACGAC
AAGGACGACCACATAAAGAATCTCGTAGACACGGGGTACGGCGGACTGGA
GACTTTGAAGAAGGACATTCTCTTTGACTTCTTTCGGTCGGCATTCGACG
GCAGCGGTGCCGACAACTTCTTCGATGCGGGCAGTTGCATCGATGGTCGA
CTAACCTCGGCATGGAACTGGTGCTCCCAGCTCAACTCCAAGCCGTTCTT
CCCCATGTTCCAGCTCACGGGGTTCACTGGTTTCGACGGAGAGTTCCAGC
GATGATTGCATCGATGGTCGACTAACCTCGGCATGGAACTGGTGCTCCCA
GCTCAACTCCAAGCCGTTCTTCCCCATGTTCCAGCTCACGGGGTTCACTG
GTTTCGACGGAGAGTTCCAGCGATGA
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