prot_S-dermatodea_contig9745.17733.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9745.17733.1
Unique Nameprot_S-dermatodea_contig9745.17733.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length81
Homology
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BLAST of mRNA_S-dermatodea_contig9745.17733.1 vs. uniprot
Match: A0A6H5KQA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA3_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.100e-8
Identity = 42/90 (46.67%), Postives = 53/90 (58.89%), Query Frame = 0 
Query:    1 ASPVAVAGLPEDSRVAPETPPTRRPEVPPSTGEGTGPNPS---------PTQTSPLVVHLGTVRAGTTARRRFNVSNLNPVEVSISGSSG 81
            ASP  +AGLP DSR A   PP R       + E T  +PS         P +  PLVV LG +RAG T R+RFNV+NLNPVEV+++ + G
Sbjct: 1021 ASPTVLAGLPPDSRSAFVRPP-REASRNAGSKEATVADPSSSSPPTASAPPEPRPLVVDLGILRAGATGRQRFNVTNLNPVEVNVTNTGG 1109
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BLAST of mRNA_S-dermatodea_contig9745.17733.1 vs. uniprot
Match: D8LB05_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB05_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 4.770e-7
Identity = 41/97 (42.27%), Postives = 50/97 (51.55%), Query Frame = 0 
Query:    1 ASPVAVAGLPEDSRVAPETPPTRRPEVPPSTGEGTGPNP----------------SPTQTSPLVVHLGTVRAGTTARRRFNVSNLNPVEVSISGSSG 81
            ASP  VAGLP DSR A   PP    E   + G                       +P +  PLVV LG +RAG T RRRFNV+NLNPVEV+++ + G
Sbjct:  841 ASPTVVAGLPPDSRSAFVRPPR---EASRNAGSKEAXXXXXXXXXXXXXXXXXXXAPPEPRPLVVDLGIIRAGATGRRRFNVTNLNPVEVNVTNTGG 934
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9745.17733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQA3_9PHAE2.100e-846.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB05_ECTSI4.770e-742.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9745contigS-dermatodea_contig9745:4418..5445 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9745.17733.1mRNA_S-dermatodea_contig9745.17733.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9745 4418..5445 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9745.17733.1 ID=prot_S-dermatodea_contig9745.17733.1|Name=mRNA_S-dermatodea_contig9745.17733.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=81bp
ASPVAVAGLPEDSRVAPETPPTRRPEVPPSTGEGTGPNPSPTQTSPLVVH
LGTVRAGTTARRRFNVSNLNPVEVSISGSSG
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