prot_S-dermatodea_contig97304.17724.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig97304.17724.1
Unique Nameprot_S-dermatodea_contig97304.17724.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length170
Homology
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BLAST of mRNA_S-dermatodea_contig97304.17724.1 vs. uniprot
Match: A0A2D8XKI4_9HYPH (Peptidase S1 domain-containing protein (Fragment) n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D8XKI4_9HYPH)

HSP 1 Score: 221 bits (564), Expect = 2.550e-65
Identity = 146/170 (85.88%), Postives = 156/170 (91.76%), Query Frame = 0 
Query:    1 TVENGATLATEGTSSLSNGSLKLNGQFAALGLNINGGMLSGSGNLATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSIEIEGDQSDQLRVIGTADIGGILALSIAPGGALPENGKTFLLVNAGTLTGDWDDTAPNLPGTLIVTGENLTATGYEVTIGRQSFNAVL 170
            TVENGAT ATEGTSSLSNG+L+LNGQFAALGLNI+GGMLSGSGNLATV XXXXXXXXXXXXXXXXXXXXXXXX       LS+E++GDQSDQL V GTAD+GGILALS+APGGALPENG+TFLLVNAG LTGDWDDTAPNLPGT+IVTGENLTATGY VTIGRQSFN VL
Sbjct:  355 TVENGATFATEGTSSLSNGALQLNGQFAALGLNISGGMLSGSGNLATVNXXXXXXXXXXXXXXXXXXXXXXXXTLSNDAILSMELDGDQSDQLLVTGTADLGGILALSLAPGGALPENGETFLLVNAGALTGDWDDTAPNLPGTIIVTGENLTATGYAVTIGRQSFNNVL 524
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig97304.17724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2D8XKI4_9HYPH2.550e-6585.88Peptidase S1 domain-containing protein (Fragment) ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006315Outer membrane autotransporter barrelTIGRFAMTIGR01414TIGR01414coord: 60..130
e-value: 1.6E-4
score: 18.8
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 4..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig97304contigS-dermatodea_contig97304:2..511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig97304.17724.1mRNA_S-dermatodea_contig97304.17724.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig97304 2..511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig97304.17724.1 ID=prot_S-dermatodea_contig97304.17724.1|Name=mRNA_S-dermatodea_contig97304.17724.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=170bp
TVENGATLATEGTSSLSNGSLKLNGQFAALGLNINGGMLSGSGNLATVNG
LTATAGTIAPGNSIGTLNVVGNLTLSDDATLSIEIEGDQSDQLRVIGTAD
IGGILALSIAPGGALPENGKTFLLVNAGTLTGDWDDTAPNLPGTLIVTGE
NLTATGYEVTIGRQSFNAVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006315OM_autotransptr_brl
IPR011050Pectin_lyase_fold/virulence