prot_S-dermatodea_contig9694.17695.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9694.17695.1
Unique Nameprot_S-dermatodea_contig9694.17695.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length443
Homology
BLAST of mRNA_S-dermatodea_contig9694.17695.1 vs. uniprot
Match: A0A6H5KJ55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ55_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 8.420e-50
Identity = 173/388 (44.59%), Postives = 202/388 (52.06%), Query Frame = 0
Query:  109 GRVSAGEEDGIRLVGEMDISKPAYLQIQEGRDGRSDTLLVSQFGLTRGGAVSRIDLDPPPRFPRLLSGEEGXXXXXXXXXXXXXXXXDVMARRAQPRLMGTWGGPLLWPNEVNEVPHE-----ALVRLT----------------QGEDAEARYLAGDTRDVAEGGEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMSPANRNKIPGLLRFESDQFSLLRLESDKFINGDDDDVYPRRPKVQP---------------APQLDPEQAEP--------AASTPPAAGADGDAAVSLDWDGRL-PER--AVLVADGFLVPGKSDGGVYVVXXXXXXXXXXXXXXRG---------GRVGG------LPVGGGSDTGERIVRLTGWKR 434
            G VS    D IRLVGEM+I KPAYLQ+QEGR+GRSDTLLVSQFG TRGGAVSR+DLDPPP+ PR+ +  EG     XXXXXXXXXXX V++RR QPRL GTW GPLLWPNEVN+V        +LVR                  +G +AE +YLA  TR+ +      XX                             +     + P  LRFES QFSLLRLESDKF +GD     PR+ +                  APQ+ P  AEP        AA T  +A  +        WDG L PE   AVL+ADGFLVPGK+DGGVY+V        XXXXX  G          R GG          G S T ++IVRLT  KR
Sbjct:  372 GWVSQRRGDAIRLVGEMNIDKPAYLQVQEGRNGRSDTLLVSQFGFTRGGAVSRVDLDPPPQLPRMFARLEGAVGGSXXXXXXXXXXXXVLSRRTQPRLTGTWAGPLLWPNEVNQVGAAGCLAWSLVRWVTAGRASGRGGPLSVEGRGREAELKYLA--TRNGSSXXXXXXXGRQRQDSSTSRANEGGSDGLAGSGETNGNAGGAHVQQP--LRFESQQFSLLRLESDKFSDGD---CSPRKRRETXXXXXXXXXXXXXXGGAPQVPPGTAEPSLLQDGRNAAGT--SASTESPPTTLPGWDGPLLPEDGDAVLIADGFLVPGKADGGVYLVVPAAAEERXXXXXGVGVDGAARGRESRAGGKAGAGAAAAVGSSPTEDKIVRLTNPKR 750          
BLAST of mRNA_S-dermatodea_contig9694.17695.1 vs. uniprot
Match: D7FTN5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN5_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.750e-48
Identity = 138/305 (45.25%), Postives = 160/305 (52.46%), Query Frame = 0
Query:  111 VSAGEEDGIRLVGEMDISKPAYLQIQEGRDGRSDTLLVSQFGLTRGGAVSRIDLDPPPRFPRLLSGEEGXXXXXXXXXXXXXXXXDVMARRAQPRLMGTWGGPLLWPNEVNEVPHEALVRLTQGEDAEARYLAGDTRDVAEGGEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMSPANRNKIPGLLRFESDQFSLLRLESDKFINGDDDDVYPRRPKVQP------------APQLDPEQAEP--------AASTPPAAGADGDAAVSLDWDGRLPER---AVLVADGFLVPGKSDGGVYVV 392
            VS    D IRLVGEM+I KPAYLQ+QEGR+GRSDTLLVSQFG TRGGAVSR+DLDPPP+ PR+ +  EG       XXXXXXX   V++RR QPRL GTW GPLLWPNEVN+    +  +   G+       +G+T   A GG                                   P         LRFES QFSLLRLESDKF +GD      R  +               APQ  P  AEP        AA T  +  +         WDG LP     AVL+ADGFLVPGK+DGGVY+V
Sbjct:   89 VSRRRGDAIRLVGEMNIDKPAYLQVQEGRNGRSDTLLVSQFGFTRGGAVSRVDLDPPPQLPRIFARLEGAVSRSAAXXXXXXXGG-VLSRRMQPRLTGTWAGPLLWPNEVNQDISASRAKEGGGDSLAG---SGETNGSAGGG------------------------------AHVQQP---------LRFESQQFSLLRLESDKFSDGDRPPRLRRETEAAALPLPVTGAGAGGAPQAPPNTAEPSLLQDGRNAAGTSASTQSPPPPPTLPGWDGPLPPEDGDAVLIADGFLVPGKADGGVYLV 350          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9694.17695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJ55_9PHAE8.420e-5044.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTN5_ECTSI1.750e-4845.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9694contigS-dermatodea_contig9694:894..5004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9694.17695.1mRNA_S-dermatodea_contig9694.17695.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9694 894..5004 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9694.17695.1 ID=prot_S-dermatodea_contig9694.17695.1|Name=mRNA_S-dermatodea_contig9694.17695.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=443bp
QALPLPCNIQLVPRVERRSLVYVNGAEVAPRLVDQVGHRRAPGGGTLPAA
VTAKMPSGGRVASLGLSLAAAAAVAASVAGGGAEVGEGFGEVGEGGGGEG
RASGVGVRGRVSAGEEDGIRLVGEMDISKPAYLQIQEGRDGRSDTLLVSQ
FGLTRGGAVSRIDLDPPPRFPRLLSGEEGAAAAAAAAAAAAAAADDVMAR
RAQPRLMGTWGGPLLWPNEVNEVPHEALVRLTQGEDAEARYLAGDTRDVA
EGGEERNGSTTATSSSSSSSGGGDENNSVRGGGGGAMSPANRNKIPGLLR
FESDQFSLLRLESDKFINGDDDDVYPRRPKVQPAPQLDPEQAEPAASTPP
AAGADGDAAVSLDWDGRLPERAVLVADGFLVPGKSDGGVYVVVPPQEEEE
GESGGGRGGRVGGLPVGGGSDTGERIVRLTGWKRWVGRWGGWV
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