mRNA_S-dermatodea_contig9620.17637.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9620.17637.1 vs. uniprot
Match: D8LHA4_ECTSI (Similar to canalicular multispecific organic anion transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA4_ECTSI) HSP 1 Score: 154 bits (388), Expect = 4.380e-41 Identity = 85/116 (73.28%), Postives = 96/116 (82.76%), Query Frame = 2
Query: 2 GALVVFLATLMAVLVGRATPGIVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQQFIGLPQEGDEDEAGLTRAIVPAQ---WPCKGVELRDIHARHRSDLPAALTGVTLSVR 340
GALVVFLATLMAV+ GR++PG+VGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQ+FIGL QE ED++ +A PA WP G+ELRD+ ARHR DLP L GVTLSV+
Sbjct: 1004 GALVVFLATLMAVVAGRSSPGMVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQEFIGLAQE--EDDSHKVKASGPATRRPWPSSGIELRDVDARHRPDLPLVLNGVTLSVK 1117
BLAST of mRNA_S-dermatodea_contig9620.17637.1 vs. uniprot
Match: A0A6H5JWW8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW8_9PHAE) HSP 1 Score: 150 bits (378), Expect = 9.730e-40 Identity = 83/116 (71.55%), Postives = 95/116 (81.90%), Query Frame = 2
Query: 2 GALVVFLATLMAVLVGRATPGIVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQQFIGLPQEGDEDEAGLTRAIVPAQ---WPCKGVELRDIHARHRSDLPAALTGVTLSVR 340
GALVVFLATLMAV+ GR++PG+VGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQ+FIGL QE ED++ + PA WP G+ELRD++ARHR DL L GVTLSV+
Sbjct: 923 GALVVFLATLMAVIAGRSSPGMVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQEFIGLAQE--EDDSHKVKVSGPATRRPWPSSGIELRDVYARHRPDLLPVLNGVTLSVK 1036
BLAST of mRNA_S-dermatodea_contig9620.17637.1 vs. uniprot
Match: A0A7S3XQF6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQF6_HETAK) HSP 1 Score: 87.4 bits (215), Expect = 9.230e-18 Identity = 52/115 (45.22%), Postives = 70/115 (60.87%), Query Frame = 2
Query: 2 GALVVFLATLMAVLVGR--ATPGIVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQQFIGLPQEGDEDEAGLTRAIVPAQWPCKG-VELRDIHARHRSDLPAALTGVTLSV 337
G L+VF A L+AV ++ G VGL ++YA+TIT+TLSFG+R+ T ++N FNSVERVQ++ LP E +P WP G + +RD+ ARHR LP L V L V
Sbjct: 495 GCLIVFFAALLAVRFSGNDSSAGKVGLAVTYAITITKTLSFGLRAVTNMQNHFNSVERVQEYAALPPE--RRTVARPAGPLPPGWPAAGSISVRDVRARHRPGLPLVLRDVALEV 607
BLAST of mRNA_S-dermatodea_contig9620.17637.1 vs. uniprot
Match: A0A2J5HZ46_9EURO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Aspergillus taichungensis TaxID=482145 RepID=A0A2J5HZ46_9EURO) HSP 1 Score: 77.0 bits (188), Expect = 4.170e-14 Identity = 42/95 (44.21%), Postives = 60/95 (63.16%), Query Frame = 2
Query: 59 PGIVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQQFIGLPQEGDEDEAGLTRAIVPAQWPCKG-VELRDIHARHRSDLPAALTGVTLSVR 340
P + GL LSY LTI++ ++FGVR L+N+ NSVER++ + E EA L +A +PA WP KG + D+ R+R +LP L GVT++VR
Sbjct: 903 PSVSGLILSYMLTISQLMTFGVRMFAGLDNELNSVERIEHYANHL----EQEAPLHQAPIPANWPEKGRIVFSDVQMRYRPNLPLILKGVTMAVR 993
BLAST of mRNA_S-dermatodea_contig9620.17637.1 vs. uniprot
Match: A0A2I2FGV9_9EURO (P-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Aspergillus TaxID=5052 RepID=A0A2I2FGV9_9EURO) HSP 1 Score: 75.9 bits (185), Expect = 1.060e-13 Identity = 43/95 (45.26%), Postives = 58/95 (61.05%), Query Frame = 2
Query: 59 PGIVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQQFIGLPQEGDEDEAGLTRAIVPAQWPCKG-VELRDIHARHRSDLPAALTGVTLSVR 340
P + GL LSY LTI++ ++FGVR L+N+ NSVER+ + E EA L +A VPA WP KG + D+ R+R +LP L GVT+ VR
Sbjct: 1054 PSVSGLILSYMLTISQQMTFGVRMFAGLDNELNSVERIAHYANHL----EQEAPLHQAPVPANWPEKGRIVFSDVQMRYRPNLPLILKGVTMDVR 1144
BLAST of mRNA_S-dermatodea_contig9620.17637.1 vs. uniprot
Match: A0A383VZJ2_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VZJ2_TETOB) HSP 1 Score: 75.9 bits (185), Expect = 1.070e-13 Identity = 41/98 (41.84%), Postives = 56/98 (57.14%), Query Frame = 2
Query: 47 GRATPGIVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQQFIGLPQEGDEDEAGLTRAIVPAQWPCKG-VELRDIHARHRSDLPAALTGVTLSV 337
G +PG+ GL L YAL +TR L G ++ E+ FNSVERV Q++ E E+ A A +PA WP G + +RD+ R+R LP L GV+ V
Sbjct: 1108 GNISPGLAGLCLVYALDLTRYLKHGTAMASKTESDFNSVERVVQYLQPATEAPEETAPEVAATLPAGWPAAGAISVRDLKLRYRPGLPLVLRGVSFEV 1205
BLAST of mRNA_S-dermatodea_contig9620.17637.1 vs. uniprot
Match: A0A7R9PG85_TIMGE (Hypothetical protein (Fragment) n=1 Tax=Timema genevievae TaxID=629358 RepID=A0A7R9PG85_TIMGE) HSP 1 Score: 73.9 bits (180), Expect = 4.940e-13 Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 2
Query: 2 GALVVFLATLMAVLVGRAT--PGIVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQQFIGLPQEGDEDEAGLTRAIVPAQWPCKGV-ELRDIHARHRSDLPAALTGVTLSVR 340
G++++F A+L AVL GR + PG+VGL +SYAL IT+TL + VRSS+ +E +VER++++ QE + L +V WP GV E RD R+R DL L G+ +++
Sbjct: 690 GSIIIFFASLFAVL-GRESMDPGLVGLSVSYALQITQTLQWLVRSSSDVETNIVAVERIKEYQEYKQEAAWE---LNNRLVSEDWPTHGVLEFRDYQLRYREDLDLVLNGINFTLQ 801
BLAST of mRNA_S-dermatodea_contig9620.17637.1 vs. uniprot
Match: A0A7R9HZH2_9NEOP (Hypothetical protein n=3 Tax=Timema TaxID=61471 RepID=A0A7R9HZH2_9NEOP) HSP 1 Score: 73.9 bits (180), Expect = 5.040e-13 Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 2
Query: 2 GALVVFLATLMAVLVGRAT--PGIVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQQFIGLPQEGDEDEAGLTRAIVPAQWPCKGV-ELRDIHARHRSDLPAALTGVTLSVR 340
G++++F A+L AVL GR + PG+VGL +SYAL IT+TL + VRSS+ +E +VER++++ QE + L +V WP GV E RD R+R DL L G+ +++
Sbjct: 1108 GSIIIFFASLFAVL-GRESMDPGLVGLSVSYALQITQTLQWLVRSSSDVETNIVAVERIKEYQEYKQEAAWE---LNNRLVSEDWPTHGVLEFRDYQLRYREDLDLVLNGINFTLQ 1219
BLAST of mRNA_S-dermatodea_contig9620.17637.1 vs. uniprot
Match: A0A150GN17_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GN17_GONPE) HSP 1 Score: 72.8 bits (177), Expect = 1.270e-12 Identity = 40/101 (39.60%), Postives = 56/101 (55.45%), Query Frame = 2
Query: 38 VLVGRATPGIVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQQFIGLPQEGDEDEAGLTRAIVPAQWPCKG-VELRDIHARHRSDLPAALTGVTLSV 337
V+ G PG+ GL L YAL +TR L G ++ E FNSVER+ Q++ +E D + VP +WP G +E+ D+ R+R +P L GVT SV
Sbjct: 828 VIQGGIDPGMAGLALVYALDLTRFLKHGTNMASKSEADFNSVERIVQYLAPEREARPDTPPEVASTVPPEWPSAGAIEVVDLSMRYRPGMPLVLKGVTFSV 928
BLAST of mRNA_S-dermatodea_contig9620.17637.1 vs. uniprot
Match: A0A7S0EXI0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EXI0_9CRYP) HSP 1 Score: 72.4 bits (176), Expect = 1.740e-12 Identity = 48/116 (41.38%), Postives = 69/116 (59.48%), Query Frame = 2
Query: 2 GALVVFLATLMAVLVGRATPGIVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQQFIGL-PQEGDEDEA-GLTRAIVPAQWPCKG-VELRDIHARHRSDLPAALTGVTLSVR 340
GAL+ F L+ + G + GI GL L+YA+TITRTL+ VR+ T LE Q N+VERVQ++ L P+E RA++P WP KG + ++ R++ P L G++L VR
Sbjct: 980 GALLTFFTALLCLFSGIGSGGI-GLLLTYAITITRTLAGSVRTYTQLEVQMNAVERVQEYCNLQPEEXXXXXXQAKARALIPPGWPSKGEIIWENVTCRYKQQGPDVLKGISLHVR 1094 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9620.17637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9620.17637.1 >prot_S-dermatodea_contig9620.17637.1 ID=prot_S-dermatodea_contig9620.17637.1|Name=mRNA_S-dermatodea_contig9620.17637.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=103bp MAVLVGRATPGIVGLGLSYALTITRTLSFGVRSSTALENQFNSVERVQQFback to top mRNA from alignment at S-dermatodea_contig9620:591..4358+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9620.17637.1 ID=mRNA_S-dermatodea_contig9620.17637.1|Name=mRNA_S-dermatodea_contig9620.17637.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3768bp|location=Sequence derived from alignment at S-dermatodea_contig9620:591..4358+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9620:591..4358+ >mRNA_S-dermatodea_contig9620.17637.1 ID=mRNA_S-dermatodea_contig9620.17637.1|Name=mRNA_S-dermatodea_contig9620.17637.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at S-dermatodea_contig9620:591..4358+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |