mRNA_S-dermatodea_contig9567.17588.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9567.17588.1 vs. uniprot
Match: D7FKW9_ECTSI (Similar to Ubiquitin carboxyl-terminal hydrolase 15 (Ubiquitin thiolesterase 15) (Ubiquitin-specific processing protease 15) (Deubiquitinating enzyme 15) (Unph-2) (Unph4) isoform 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKW9_ECTSI) HSP 1 Score: 335 bits (860), Expect = 1.230e-102 Identity = 173/229 (75.55%), Postives = 187/229 (81.66%), Query Frame = 1
Query: 1 GGARASMNKEAFLRVFPEMQGLPTDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLFSAASQPKHFGTGADGGARDANAA-----ACLSEAELTALKKQVGLVV-NADYMHFQAVPAGPDAKPASRGLLLSEYFAWAELHVSDEALDRALRPFYLLPSPQQEKDKVLTQLMEYTLEEGQVMCLVAGPWWSYWCNYAALTLEDLQRVPERVALGLGK 669
GGARA M+KEAFLRVFP++QGLP +VQRSAF LFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLFS ASQPKH+GTGADGGARDA++A A LS+AEL LKKQ+GL +A++ HFQ GLLLSEYF WAELH SDEALDRALRPFYLLPSPQQEKDKVL LMEY +EE Q MCLVA PWWSYW NYAALT ED+ RVPER ALGL K
Sbjct: 146 GGARAGMDKEAFLRVFPDVQGLPVEVQRSAFLLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLFSGASQPKHYGTGADGGARDASSASGATTARLSDAELVGLKKQLGLSAGDANHAHFQKTSG-------VSGLLLSEYFEWAELHASDEALDRALRPFYLLPSPQQEKDKVLAHLMEYAIEEAQCMCLVASPWWSYWSNYAALTKEDVLRVPERTALGLDK 367
BLAST of mRNA_S-dermatodea_contig9567.17588.1 vs. uniprot
Match: A0A7S2Q410_9DINO (Calmodulin (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2Q410_9DINO) HSP 1 Score: 75.5 bits (184), Expect = 9.540e-13 Identity = 62/219 (28.31%), Postives = 104/219 (47.49%), Query Frame = 1
Query: 19 MNKEAFLRVFPEMQGLPTDVQRSAFRLFDCVGRGSLDFRNFCRALALCCR--GSREERLRFLFDLFSA-----------------ASQPKHFGTG----ADGGARDANAAACLSEAELTALKKQVGLVVNADYMHFQAVPAGPDAKPASRGLLLSEYFAWAELHVSDEALDRALRPFYLLPSPQQEK---DKVLTQLMEYTLEEGQVMCLVAGPWWSYW 597
++K+ F ++F E+Q +P V SAFR+FD G+L+FR FC ALALCC S +E++RF+FD+F A Q + +D A D +A A + A KQ L+ N+ Y+ F+ + WAE + ++L+ L F ++PSP++E +++L++ ++L+EG ++ W W
Sbjct: 67 LDKKGFYKLFAELQDMPKAVAESAFRMFDTDASGTLNFREFCCALALCCHLMSSVDEKMRFVFDMFDTNDDGLLGASDVQLLLDYALQKEDMRVEEQQQSDDKAGDKDAVARARRQQRVAEIKQE-LLGNSPYLTFE------------------RFCEWAERN--HDSLNNLLHTFQIVPSPERECTICEEILSR--HHSLQEGSTWYCISHKWLQVW 262
BLAST of mRNA_S-dermatodea_contig9567.17588.1 vs. uniprot
Match: A0A1V9Z6F4_9STRA (Protein kinase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6F4_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 3.610e-7 Identity = 30/75 (40.00%), Postives = 43/75 (57.33%), Query Frame = 1
Query: 1 GGARASMNKEAFLRVFPEMQGLPTDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLFSAASQ 225
G + + K AFL++FP LP + F +FD G GS+ F LA+ CRGSREE+L+F+FDL+ +
Sbjct: 44 GSSEQGVGKAAFLKIFP----LPGLLGERLFAVFDKNGSGSISFYELVAGLAILCRGSREEKLKFIFDLYDVTER 114
BLAST of mRNA_S-dermatodea_contig9567.17588.1 vs. uniprot
Match: A0A7S3JRX2_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRX2_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.850e-6 Identity = 29/50 (58.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 76 VQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLFSAASQ 225
V + F LFD G + FR+FCRALA CCRG+R ERLRFLF LF+ Q
Sbjct: 89 VGDAVFGLFDSSSSGFVSFRDFCRALAWCCRGTRLERLRFLFCLFAMYEQ 138
BLAST of mRNA_S-dermatodea_contig9567.17588.1 vs. uniprot
Match: A0A836CE72_9STRA (DUSP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE72_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 3.140e-6 Identity = 33/67 (49.25%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 130 FRNFCRALALCCRGSREERLRFLFDLFSAASQPKHFGTGADGGARDANAAACLSEAELTALKKQVGL 330
FR+FCRA ALCCRGS +ER RFL DLF+ +++G AR A++ A LS A AL++ GL
Sbjct: 285 FRDFCRAQALCCRGSDDERRRFLMDLFADTKATRYYGREGPCDARTADSPA-LSAAAFAALQRHCGL 350
BLAST of mRNA_S-dermatodea_contig9567.17588.1 vs. uniprot
Match: A0A7S1UK96_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UK96_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 3.710e-6 Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query: 67 PTDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLFSA 216
P D + LFD G +DFR+ CR L+LCC+GS E+ R+LFDLFS+
Sbjct: 75 PPDTLKRIGLLFDARQAGKVDFRDLCRGLSLCCKGSHREKTRWLFDLFSS 124
BLAST of mRNA_S-dermatodea_contig9567.17588.1 vs. uniprot
Match: A0A067CQZ0_SAPPC (CAMK/CAMK1 protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQZ0_SAPPC) HSP 1 Score: 56.6 bits (135), Expect = 9.620e-6 Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 7 ARASMNKEAFLRVFPEMQGLPTDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLFSAASQ 225
+ + +NK +FL++FP LP + F +FD G++ F LA+ CRGSREE+L+F+FDL+ +
Sbjct: 48 SESGVNKASFLKIFP----LPGLLGERLFAVFDKNASGTISFYELVAGLAVLCRGSREEKLKFIFDLYDVTER 116
BLAST of mRNA_S-dermatodea_contig9567.17588.1 vs. uniprot
Match: A0A1R2B6A4_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B6A4_9CILI) HSP 1 Score: 56.6 bits (135), Expect = 1.060e-5 Identity = 51/220 (23.18%), Postives = 92/220 (41.82%), Query Frame = 1
Query: 34 FLRVFPEMQGLPTDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRGSREERLRFLFDLFSAASQPKHFGTGADGGARDANAAACLSEAELTALKKQVGLVVNA---------DYMHFQAVPAGPDAKPASRGLLLSEYFAWAELHVSDEALDRALRPFYLLPSPQQEKD---KVLTQLMEYTLEEGQVMCLVAGPWWSYWCNYA---ALTLEDLQRVPER 648
F ++ P + LP D+ +AF +F R + + +FC ++ GSR+E+ RFL+D+F D LS+ EL L + + V+ + ++ A A + +E+ WA + + L +AL+PF ++PS EK+ K ++ L G+ +++ W W NY + +D+ V R
Sbjct: 56 FKKLMPYISKLPNDIIENAFNIFRAYTRDRITWMHFCATVSQYILGSRQEKCRFLYDVF------------------DKKQRGLLSKDELALLNRHLAEVLKTPTSGKSNTKNLLNLHANQAN--------AIKFNEFRDWA---IENIDLHKALQPFEIIPSAITEKEIYIKYREEVKSKGLILGETYYIISLNWIEAWKNYVRFDSFDEDDMNDVSNR 246 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9567.17588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9567.17588.1 >prot_S-dermatodea_contig9567.17588.1 ID=prot_S-dermatodea_contig9567.17588.1|Name=mRNA_S-dermatodea_contig9567.17588.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=220bp MNKEAFLRVFPEMQGLPTDVQRSAFRLFDCVGRGSLDFRNFCRALALCCRback to top mRNA from alignment at S-dermatodea_contig9567:3725..6201+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9567.17588.1 ID=mRNA_S-dermatodea_contig9567.17588.1|Name=mRNA_S-dermatodea_contig9567.17588.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2477bp|location=Sequence derived from alignment at S-dermatodea_contig9567:3725..6201+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9567:3725..6201+ >mRNA_S-dermatodea_contig9567.17588.1 ID=mRNA_S-dermatodea_contig9567.17588.1|Name=mRNA_S-dermatodea_contig9567.17588.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at S-dermatodea_contig9567:3725..6201+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |