prot_S-dermatodea_contig12884.1758.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12884.1758.1
Unique Nameprot_S-dermatodea_contig12884.1758.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length808
Homology
BLAST of mRNA_S-dermatodea_contig12884.1758.1 vs. uniprot
Match: A0A6H5KZI5_9PHAE (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI5_9PHAE)

HSP 1 Score: 587 bits (1512), Expect = 2.420e-192
Identity = 411/924 (44.48%), Postives = 511/924 (55.30%), Query Frame = 0
Query:    1 MARLKKESERRAKALRKERKARALERRHAETAAQGDDEPGGDSPDILRXXXXXXXXXN------------------------FDPQEALLVIYVCTHAAEITKGKNVAGTYLVASDTSWTSKENVALTAVPLETFAEAIADIQ--------------------------VRHKVMFLDVVHTEKKVGGFKTRHLYPPRDLYDTAARLSNAVVVGSCRIGGTREIDTEVLRNEVAAAWGTAKSNCGDGETGVSHAGSTSSRSGENSSEP-RSRSSARSSGDGVY-------------------------------------------------TDGSTSGEDESARSRSNVTSASGRXXXXXAVSGSSDDESRGESGSGSEWGEDDPHRRDKGRKTGKGKDRNGPRPPEGRGPRPQYATLDGNGGTGGAPTTGQVLGLAGALGQSAVDLVLDRDDDAKASAALAKKVSEQYEGGATRACPPVYDRAIYDETMSVFGRSVRDAITGRCAENVHVPRVLVAHLFAYIARTFAPYERPTMAVAKEKEEASGGEGVAGSGRKTSASEAK-------------AKKXXXXXXXXRRSQLGAKAAAEVARKAKDAAELKSXXXXXXXRTQMPVIAGPSIAAIASATVCAAPTPPPPPGVPFATEITRASVRLTWEDPRFSGEPPTCYELEAKGEVRNNGTWTPVFPPWYPTVVAQPLSIPHRIPGLGLRYRVRAGNYGGWGDFSEPTELITTKPWLEDVGRNAAVRAMEALVRTGGPRLVLERMKRYSSSVLIQESGFHQLVGEFNKGGGIPRTSLAQEVATVVADAMAAFSQVRTIQGSGLLLIGWAARGKG--GGAPLAEDLVGKCQGLVATAEKLHSMDVTVKSHVLWATANLRLARQ----AGAVVSYR-ATSED-VWLDASSLDEE 803
            MARLKKESE+RAKALRKER+ARA ERR+A  A + ++E GG   ++ R                                   DP+E LL++YVCTH A I++GK VAGTYLVA++TSW S+E++A +AV LETFA AI  IQ                          +RHKV+FLDVVHTE++  GFKTRHLYPPRDLYD+AA L  AVVVGSCRIG T E+D +VLR E A  W + +     G       G   +R G   SE  R+ SS R                                                        +  S +G +              R        G S DE    +  G++   D    R + + +G+GK          R PR   +   GN     +P +G V    GAL                  + +AK   +Q+E G  RAC  VYDRA Y+E MSVFGR+VRD + G+C EN  + RVLV HL+ +I R F+P+  P ++VA+E+ EA+G                              AKK        RR++LGAKA AE  R+AK+AA L+        RTQ+PVIAGPSI+AIA AT CA+             EITR SVRL W+DP F GEPP  YELEAKG++R N TW  VFPP YP++ +QP++I HR+PGLGLRYRVRA N+GGWG  S+PTE++TTK WLED G N+A RAM++L R GG RLVL RM+RYS+S+L QESGFHQLV EFNKG GIPR SLAQEVA VVADAM AFSQVR IQ SGLLL+GWAARGKG  G   L+ DLV +C GLVATAEKLHSMDV +K H +WA ++L    +    AGA+V +  A+SED VW  ASSL E+
Sbjct:  191 MARLKKESEKRAKALRKEREARAWERRNARRAEKAEEEGGGGVSNVARPREEGERQDGNKGEEDVXXXXXXXXXXXXXXXXXXDPEEGLLLVYVCTHVAVISRGKGVAGTYLVATNTSWKSREHLATSAVLLETFAAAIDRIQATVFPHIFTDHCPLRPPQHFGVPLSKLRHKVLFLDVVHTEREHEGFKTRHLYPPRDLYDSAAVLCGAVVVGSCRIGQTSEVDLDVLRRETAGFWASVERRHNGG-------GKNKARGGVGDSETDRATSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSSGTGGNRXXXXXXXXXXXGRRNQRSYKHGGGSSDEDVRNAFRGNK--RDRRRHRLQIKTSGRGK----------RVPRSLDSLASGNNRGETSPKSGTVR--KGALASGG-------------GSGMAK--GQQHEEGGMRACAAVYDRANYEEIMSVFGRAVRDGLKGQCVENTKLSRVLVVHLYDFIRREFSPFAHPRLSVAREEAEATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKEADRAEAKRRARLGAKALAEEVRQAKEAAMLREVEEEKRRRTQVPVIAGPSISAIARATTCASXXXXXXXXXXXXIEITRTSVRLAWDDPPFPGEPPFLYELEAKGDLRGNSTWASVFPPRYPSISSQPVNISHRVPGLGLRYRVRACNHGGWGAASDPTEVVTTKAWLEDTGANSAARAMKSLARAGGARLVLARMRRYSASLLNQESGFHQLVAEFNKGLGIPRASLAQEVAVVVADAMEAFSQVRGIQDSGLLLLGWAARGKGEAGSDVLSADLVERCLGLVATAEKLHSMDVAIKGHAIWARSHLLRRGEGRGDAGAIVEHSVASSEDGVWAGASSLAEQ 1078          
BLAST of mRNA_S-dermatodea_contig12884.1758.1 vs. uniprot
Match: D7FPY8_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY8_ECTSI)

HSP 1 Score: 553 bits (1425), Expect = 3.640e-182
Identity = 350/765 (45.75%), Postives = 424/765 (55.42%), Query Frame = 0
Query:   59 FDPQEALLVIYVCTHAAEITKGKNVAGTYLVASDTSWTSKENVALTAVPLETFAEAIADIQVRHKVMFLDVVHTEKKVGGFKTRHLYPPRDLYDTAARLSNAVVVGSCRIGGTREIDTEVLRNEVAAAWGTAKSNCGDGETGVSHAGSTSSRSGENSSEPRSRSSARSSGDGVYTDGSTSGEDESARSRSNVTSASGRXXXXXAVSGSSDDESRGESGSGSEWGEDDPHRRDKGRKTGKGKDRNGPRPPEGRGPRPQYATLDGNGGTGGAPTTGQVLGLAGALGQSAVDLVLDRDDDAKASAALAKKVSEQYEGGATRACPPVYDRAIYDETMSVFGRSVRDAITGRCAENVHVPRVLVAHLFAYIARTFAPYERPTMAVAKEKEEASGGEGVAGSGRKTSASEAK------------AKKXXXXXXXXRRSQLGAKAAAEVARKAKDAAELKSXXXXXXXRTQMPVIAGPSIAAIASATVCAAPTPPPPPGVPFATEITRASVRLTWEDPRFSGEPPTCYELEAKGEVRNNGTWTPVFPPWYPTVVAQPLSIPHRIPGLGLRYRVRAGNYGGWGDFSEPTELITTKPWLEDVGRNAAVRAMEALVRTGGPRLVLERMKRYSSSVLIQESGFHQLVGEFNKGGGIPRTSLAQEVATVVADAMAAFSQVRTIQGSGLLLIGWAARGKG--GGAPLAEDLVGKCQGLVATAEKLHSMDVTVKSHVLWATANLRLARQ----AGAVVSYRATS--EDVWLDASSLDEE 803
            FDP+E LL++YVCTH A I+KGK VAGTYLVA+DTSW S+E +A +AV L+TFA AI  IQ+RHKV+FLDVVHTE+K  GFKTRHLYPPR+LYD+AA L  AVVVGSCRIG T E+D +VLR E A  W                             EPR                                                                   H R      GK K             R +   L   GG+G                                   +AK   +Q+E G  RAC  VYDRA Y++ MSVFGR+VRD + G+C EN  + RVLV HL+ +I R F+P+  P ++VA+E+ EA                               AKK        RR++LGAKA AE  R+AK+ A L+        RTQ+PVIAG SI                   +PF  EITR SVRL W+DP F GEPP  YELEAKG++R N TW  VFPP +P++ +QP++I HR+PGLGLRYRVRA N+GGWG  S+PTE++TTK WLED G N+A RAM++L R GG RLVL RM+RYS+S+L QESGFHQLV EFNKG GIPR SLA+EVA VVADAM AFSQVR IQ SGLLL+GWAARGKG  G   L+ DLV +C GLVATAEKLHSMDV +K H +WA ++L    +    AGA+V Y   S  +DVW  ASSL E+
Sbjct:  235 FDPEEGLLLVYVCTHVAVISKGKGVAGTYLVATDTSWKSREQLATSAVLLQTFAAAIDRIQLRHKVLFLDVVHTERKHEGFKTRHLYPPRNLYDSAAVLCGAVVVGSCRIGQTSEVDLDVLRGEAADFWAAV--------------------------EPR-------------------------------------------------------------------HNR-----GGKNK------------ARARKGALASGGGSG-----------------------------------MAK--GQQHEEGGMRACAAVYDRANYEDIMSVFGRAVRDGLKGQCVENTKLSRVLVVHLYDFIRREFSPFAHPRLSVAQEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKKEADRAEAKRRARLGAKALAEEVRQAKEVAMLREVEEEKRQRTQVPVIAGLSIXXXXXXXXXXXXXXXXXXLIPFPIEITRTSVRLAWDDPPFPGEPPFLYELEAKGDLRGNSTWASVFPPRFPSISSQPVNISHRVPGLGLRYRVRACNHGGWGAASDPTEVVTTKAWLEDTGANSAARAMKSLARAGGARLVLARMRRYSASLLNQESGFHQLVAEFNKGLGIPRASLAEEVAVVVADAMEAFSQVRGIQDSGLLLLGWAARGKGEAGSDVLSADLVERCLGLVATAEKLHSMDVAIKGHAIWARSHLLRWGEGRGDAGAIVEYSVASSEDDVWAGASSLAEQ 852          
BLAST of mRNA_S-dermatodea_contig12884.1758.1 vs. uniprot
Match: A0A7S3UR83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UR83_HETAK)

HSP 1 Score: 114 bits (286), Expect = 2.140e-24
Identity = 72/243 (29.63%), Postives = 112/243 (46.09%), Query Frame = 0
Query:  527 VCAAPTPPPPPGVPFATEITRASVRLTWEDPRFSGEPPTCYELEAKGEVRNNGTWTPVFPPWYPTVVAQPLSIPHRIPGLGLRYRVRAGNYGGWGDFSEPTELITTKPWLEDVGRNAAVRAMEALVRTGGPRLVLERMKRYSSSVLIQESGFHQLVGEFNKGGGIPRTSLAQEVATVVADAMAAFSQVRTIQGSGLLLIGWAARGKGGGAPLAEDLVGKCQGLVATAEKLHSMDVTVKSHVLW 769
            +C+ P  PP P  P   E+    + L W +P + G     YE++ +G+ R N  W  +    Y T+      IP+ +PG+ L +RVRA NYGGWG++S  T+ I   P    +     +RA        G R VL  M   +    +Q  G  QL+    + GG  R S+A+E   VV  AM  F + + +Q  G L++GW+   K G   +   L    + ++  A+     D  + +H  W
Sbjct:   36 LCSKPCVPPFPYTPEVVEVKETMIALEWANPEYDGPENLKYEVQGRGKTRVNKNWKTLCT--YATISQPFFKIPNLVPGVELMFRVRAFNYGGWGEYSWETDYIIPNPVARSISLARDLRAAAGF----GARRVLAVMAARAHLAEVQRQGAKQLLAMAARYGGFKRISVAKECVEVVLKAMKKFDKDKVMQSLGCLVVGWSC--KTGEEVINTALQNDAEKVLVDAQNTFKGDTAIINHSKW 270          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12884.1758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KZI5_9PHAE2.420e-19244.48Fibronectin type-III domain-containing protein n=1... [more]
D7FPY8_ECTSI3.640e-18245.75Fibronectin type-III domain-containing protein n=1... [more]
A0A7S3UR83_HETAK2.140e-2429.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 521..634
e-value: 1.8E-13
score: 52.6
IPR003961Fibronectin type IIIPROSITEPS50853FN3coord: 536..635
score: 15.148
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 527..635

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12884contigS-dermatodea_contig12884:667..5109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12884.1758.1mRNA_S-dermatodea_contig12884.1758.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12884 136..5362 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12884.1758.1 ID=prot_S-dermatodea_contig12884.1758.1|Name=mRNA_S-dermatodea_contig12884.1758.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=808bp
MARLKKESERRAKALRKERKARALERRHAETAAQGDDEPGGDSPDILREE
EDDEEEENFDPQEALLVIYVCTHAAEITKGKNVAGTYLVASDTSWTSKEN
VALTAVPLETFAEAIADIQVRHKVMFLDVVHTEKKVGGFKTRHLYPPRDL
YDTAARLSNAVVVGSCRIGGTREIDTEVLRNEVAAAWGTAKSNCGDGETG
VSHAGSTSSRSGENSSEPRSRSSARSSGDGVYTDGSTSGEDESARSRSNV
TSASGRSSISSAVSGSSDDESRGESGSGSEWGEDDPHRRDKGRKTGKGKD
RNGPRPPEGRGPRPQYATLDGNGGTGGAPTTGQVLGLAGALGQSAVDLVL
DRDDDAKASAALAKKVSEQYEGGATRACPPVYDRAIYDETMSVFGRSVRD
AITGRCAENVHVPRVLVAHLFAYIARTFAPYERPTMAVAKEKEEASGGEG
VAGSGRKTSASEAKAKKAAAKEQKKRRSQLGAKAAAEVARKAKDAAELKS
AEEEKLRRTQMPVIAGPSIAAIASATVCAAPTPPPPPGVPFATEITRASV
RLTWEDPRFSGEPPTCYELEAKGEVRNNGTWTPVFPPWYPTVVAQPLSIP
HRIPGLGLRYRVRAGNYGGWGDFSEPTELITTKPWLEDVGRNAAVRAMEA
LVRTGGPRLVLERMKRYSSSVLIQESGFHQLVGEFNKGGGIPRTSLAQEV
ATVVADAMAAFSQVRTIQGSGLLLIGWAARGKGGGAPLAEDLVGKCQGLV
ATAEKLHSMDVTVKSHVLWATANLRLARQAGAVVSYRATSEDVWLDASSL
DEETPTL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR003961FN3_dom
IPR036116FN3_sf