prot_S-dermatodea_contig95443.17567.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig95443.17567.1
Unique Nameprot_S-dermatodea_contig95443.17567.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length44
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig95443.17567.1 vs. uniprot
Match: A0A6H5JL03_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL03_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.880e-15
Identity = 38/44 (86.36%), Postives = 44/44 (100.00%), Query Frame = 0 
Query:    1 MQSAVGGSDEERALRKKRKKSKEDDRFNAVKSAIIKRLGDTCDV 44
            +Q+AVGGSDEERALR+K++KSKEDDRFNAVKSAIIKRLGDTCD+
Sbjct:   19 IQAAVGGSDEERALRRKKRKSKEDDRFNAVKSAIIKRLGDTCDL 62
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig95443.17567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JL03_9PHAE2.880e-1586.36t-SNARE coiled-coil homology domain-containing pro... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig95443contigS-dermatodea_contig95443:166..297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig95443.17567.1mRNA_S-dermatodea_contig95443.17567.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig95443 166..300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig95443.17567.1 ID=prot_S-dermatodea_contig95443.17567.1|Name=mRNA_S-dermatodea_contig95443.17567.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=44bp
MQSAVGGSDEERALRKKRKKSKEDDRFNAVKSAIIKRLGDTCDV
back to top