prot_S-dermatodea_contig9539.17561.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig9539.17561.1
Unique Name	prot_S-dermatodea_contig9539.17561.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	185

Homology

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BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot
Match: A0A6H5KH14_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH14_9PHAE)

HSP 1 Score: 363 bits (932), Expect = 1.870e-118
Identity = 181/185 (97.84%), Postives = 183/185 (98.92%), Query Frame = 0

Query:    1 MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLVDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDNDAQVVANCVVVLNEIMADAGGMATNRAIIHHLLGRLEDFNEWGVCHILALVSR 185
            MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASL DANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQD+DAQVVANCVVVLNEIMADAGGMATN AI+HHLLGRLEDFNEWGVCHILALVSR
Sbjct:   71 MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLTDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDSDAQVVANCVVVLNEIMADAGGMATNTAIVHHLLGRLEDFNEWGVCHILALVSR 255

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BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot
Match: F0Y5E8_AURAN (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5E8_AURAN)

HSP 1 Score: 282 bits (721), Expect = 2.940e-89
Identity = 135/185 (72.97%), Postives = 161/185 (87.03%), Query Frame = 0

Query:    1 MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLVDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDNDAQVVANCVVVLNEIMADAGGMATNRAIIHHLLGRLEDFNEWGVCHILALVSR 185
            MTLGIDVSRLFTEM+++IETRDLVVKKMVY YLCTYA +KP++ +MCINTLQRDC+N DPMVRGLALRSLCSLRLP ++EYI  PL+ASL DA+SYVRKTGVM ILK++H+ P++V  G +VD LY+ML+D D  VVANC+VVLNEIM D GG+A N AI+HHLLGRL DFNEWG+C +L LV+R
Sbjct:   60 MTLGIDVSRLFTEMVMSIETRDLVVKKMVYHYLCTYAHEKPEMGLMCINTLQRDCSNDDPMVRGLALRSLCSLRLPTVLEYIQGPLRASLSDAHSYVRKTGVMGILKVYHMDPESVRGGDLVDVLYDMLRDGDGTVVANCIVVLNEIMLDEGGIAINTAIVHHLLGRLNDFNEWGLCSVLKLVAR 244

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BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot
Match: A0A835YU68_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU68_9STRA)

HSP 1 Score: 268 bits (686), Expect = 6.300e-82
Identity = 133/185 (71.89%), Postives = 156/185 (84.32%), Query Frame = 0

Query:    1 MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLVDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDNDAQVVANCVVVLNEIMADAGGMATNRAIIHHLLGRLEDFNEWGVCHILALVSR 185
            MTLG+DVSRLFTEM++AIETRDLVVKKMVYLYLCTYA   PDLAIMC+NTLQRDC N+DPMVRGLALRSLCSLRLP++VEYIS+PL+ SL DAN+YVRKTGVM ILK+ HL P  V +G MVDTLY ML D DAQVV NC++ L+E+ A  GGM+ +R  +  LLGRL+ F+EWG+C +LALV R
Sbjct:   84 MTLGVDVSRLFTEMIMAIETRDLVVKKMVYLYLCTYAHTNPDLAIMCVNTLQRDCGNEDPMVRGLALRSLCSLRLPSIVEYISEPLRRSLTDANAYVRKTGVMGILKLHHLAPAVVREGNMVDTLYAMLHDVDAQVVTNCLLALDEMAAAQGGMSLSRDTVLLLLGRLDGFSEWGLCKVLALVRR 268

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BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot
Match: A0A7S2SSW9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSW9_9STRA)

HSP 1 Score: 267 bits (683), Expect = 7.800e-82
Identity = 126/185 (68.11%), Postives = 158/185 (85.41%), Query Frame = 0

Query:    1 MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLVDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDNDAQVVANCVVVLNEIMADAGGMATNRAIIHHLLGRLEDFNEWGVCHILALVSR 185
            MTLGIDVSRLF+EM++ +ET+DLVVKKMVYLYL  YA++ PD+A+MCINTL RDCNN DPMVRGLALRSLCSLRLP++VEYI+DP++ SLVD N+YVR+TGVM ILK++HL P  V+   ++D +Y+MLQD D  VVANC++VLNE+M + GGMA N+AI+HHLL RL DFNEWG+  +L LV+R
Sbjct:   57 MTLGIDVSRLFSEMVMCVETKDLVVKKMVYLYLVNYAQEHPDMALMCINTLHRDCNNDDPMVRGLALRSLCSLRLPSIVEYIADPIRKSLVDKNAYVRRTGVMGILKLFHLQPDMVKQSNLIDLIYDMLQDPDGGVVANCIMVLNEMMLEEGGMAVNQAIVHHLLERLNDFNEWGLHQVLELVTR 241

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BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot
Match: A0A4D9CWN1_9STRA (B2-adapt-app_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWN1_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.240e-77
Identity = 128/186 (68.82%), Postives = 152/186 (81.72%), Query Frame = 0

Query:    1 MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLVDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDNDAQVVANCVVVLNEIMA-DAGGMATNRAIIHHLLGRLEDFNEWGVCHILALVSR 185
            MTLGIDVSRLFTEM+LAIETRDLVVKKMVYLYLC YA  KPDLA+MC+NTLQRDC+  DPMVRGLALR+LCSLRLP+M+EYIS PL+ +L D + YVRKTGVM ILK++HL P        VD LYNM+QD D  VV NC++VL E++A + GGMA N+ +I HLLGRL +FNEWG+  ILALV++
Sbjct:   67 MTLGIDVSRLFTEMVLAIETRDLVVKKMVYLYLCNYAHAKPDLALMCVNTLQRDCSADDPMVRGLALRALCSLRLPSMLEYISAPLRRALTDQSPYVRKTGVMGILKLFHLAPDVARSANFVDLLYNMIQDPDPHVVTNCLIVLGEMLAAEEGGMAVNQPLILHLLGRLGEFNEWGLTQILALVAK 252

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BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot
Match: A0A7S1C8U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8U9_9STRA)

HSP 1 Score: 251 bits (642), Expect = 3.650e-77
Identity = 119/185 (64.32%), Postives = 154/185 (83.24%), Query Frame = 0

Query:    1 MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLVDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDNDAQVVANCVVVLNEIMADAGGMATNRAIIHHLLGRLEDFNEWGVCHILALVSR 185
            MTLGIDVSRLF+EM+LA  T+DLV+KKMVYLYLC YA+   +L ++ INTLQ+DC + DPM+RGLALRSLCSLRL +++EY+  PLK+SL D+++YVRKTG+M ILK++HL P  V++  +VDT+YNM++D D  VV NC+V LNEIMAD GG+A N+AIIHHLL R++DFNEWG C +L LV+R
Sbjct:   48 MTLGIDVSRLFSEMVLASNTKDLVLKKMVYLYLCNYAQTNAELTLLVINTLQKDCRDDDPMIRGLALRSLCSLRLTSVIEYVMVPLKSSLTDSSAYVRKTGIMGILKVYHLAPARVKESDLVDTMYNMVRDRDTVVVTNCLVALNEIMADEGGIAINQAIIHHLLTRIKDFNEWGQCVVLGLVAR 232

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BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot
Match: M4C296_HYAAE (AP complex subunit beta n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C296_HYAAE)

HSP 1 Score: 253 bits (647), Expect = 2.150e-76
Identity = 120/185 (64.86%), Postives = 156/185 (84.32%), Query Frame = 0

Query:    1 MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLVDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDNDAQVVANCVVVLNEIMADAGGMATNRAIIHHLLGRLEDFNEWGVCHILALVSR 185
            MTLGIDVSRLF+EM+L ++T+DL+ KKMVYLYL  YA++  +LAIMCINTL  DC N+DPMVRGLALRSLCSLRL +++EYI DPL+ASL D ++YVRKTGV+ ILK++ L P+ +++  M+DTLYNM++D D QVV+NC+V LNEIMAD GG+A N+ I+ HLLGR+ DFNEWG C+IL +V++
Sbjct:   75 MTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPELIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMADEGGIAINQPIVMHLLGRITDFNEWGQCNILQIVAK 259

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BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot
Match: B8C1G4_THAPS (Beta subunit of clathrin adaptor complex AP2 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1G4_THAPS)

HSP 1 Score: 253 bits (645), Expect = 4.820e-76
Identity = 125/185 (67.57%), Postives = 151/185 (81.62%), Query Frame = 0

Query:    1 MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLVDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDNDAQVVANCVVVLNEIMADAGGMATNRAIIHHLLGRLEDFNEWGVCHILALVSR 185
            MTLGIDVSRLFTEMMLAIETRDLV+KKMVYL+LC YA   PDLA MC NTL +DC N+DPMVRGLALRSLCSLRLP M+EY S+PL+ SL D ++YVRKTGVM ILKM+HL  +  +  A  D LY+ML+D D+ VV NC++VLNEIMAD+GGMA NRA++ HLL R+ +F+E+G+  +L LV R
Sbjct:   81 MTLGIDVSRLFTEMMLAIETRDLVIKKMVYLFLCNYAETHPDLAQMCTNTLVKDCGNEDPMVRGLALRSLCSLRLPQMIEYTSEPLRRSLQDGHAYVRKTGVMGILKMYHLNKEEFDKAAFNDILYDMLRDPDSSVVTNCILVLNEIMADSGGMALNRAVMLHLLNRIHEFSEFGILSVLDLVPR 265

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BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot
Match: A0A7S1YPK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YPK8_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.130e-75
Identity = 126/187 (67.38%), Postives = 153/187 (81.82%), Query Frame = 0

Query:    1 MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLVDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDNDAQVVANCVVVLNEIMADA--GGMATNRAIIHHLLGRLEDFNEWGVCHILALVSR 185
            MTLGIDVSRLFTEMMLAIETRDLV+KKMVYL+LC YA   P+LA MC NTLQ+DC N+DPMVRGLALR+LCSLRLP MVEYIS+PL+ +L D ++YVRKTGVM ILK++HL     ++   VD LY+ML+D DAQVV+NC++VLNEIMA    GGMA NRAI+ HLL R+ +F+E+GV  ++ LV R
Sbjct:  243 MTLGIDVSRLFTEMMLAIETRDLVIKKMVYLFLCNYATSHPELAQMCTNTLQKDCGNEDPMVRGLALRALCSLRLPQMVEYISEPLRRALSDHHAYVRKTGVMGILKLYHLDRDKFDECNFVDILYDMLRDPDAQVVSNCIIVLNEIMAQGPDGGMALNRAIMLHLLNRIHEFSEFGVVAVIDLVPR 429

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BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot
Match: A0A484E443_BRELC (AP complex subunit beta n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E443_BRELC)

HSP 1 Score: 251 bits (642), Expect = 1.150e-75
Identity = 119/185 (64.32%), Postives = 155/185 (83.78%), Query Frame = 0

Query:    1 MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINTLQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLVDANSYVRKTGVMAILKMWHLWPQAVEDGAMVDTLYNMLQDNDAQVVANCVVVLNEIMADAGGMATNRAIIHHLLGRLEDFNEWGVCHILALVSR 185
            MTLGIDVSRLF+EM+L ++T+DL+ KKMVYLYL  YA++  +LAIMCINTL  DC N+DPMVRGLALRSLCSLRL +++EYI DPL+ASL D ++YVRKTGV+ ILK++ L P+ +++  M+DTLYNM++D D QVV+NC+V LNEIMAD GG+A N+ I+ HLL R+ DFNEWG C+IL +V++
Sbjct:   74 MTLGIDVSRLFSEMVLCVDTKDLISKKMVYLYLTNYAQKNSELAIMCINTLLNDCRNEDPMVRGLALRSLCSLRLDSILEYIHDPLQASLTDTSAYVRKTGVIGILKVYSLNPEIIKESDMIDTLYNMIRDRDPQVVSNCLVALNEIMADEGGIAINQPIVMHLLSRISDFNEWGQCNILEIVAK 258

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9539.17561.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KH14_9PHAE	1.870e-118	97.84	B2-adapt-app_C domain-containing protein n=2 Tax=E...	[more]
F0Y5E8_AURAN	2.940e-89	72.97	Adaptin_N domain-containing protein (Fragment) n=1...	[more]
A0A835YU68_9STRA	6.300e-82	71.89	Coatomer protein complex, beta sub-unit n=1 Tax=Tr...	[more]
A0A7S2SSW9_9STRA	7.800e-82	68.11	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A4D9CWN1_9STRA	1.240e-77	68.82	B2-adapt-app_C domain-containing protein n=2 Tax=M...	[more]
A0A7S1C8U9_9STRA	3.650e-77	64.32	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
M4C296_HYAAE	2.150e-76	64.86	AP complex subunit beta n=1 Tax=Hyaloperonospora a...	[more]
B8C1G4_THAPS	4.820e-76	67.57	Beta subunit of clathrin adaptor complex AP2 n=1 T...	[more]
A0A7S1YPK8_9STRA	1.130e-75	67.38	Hypothetical protein (Fragment) n=1 Tax=Ditylum br...	[more]
A0A484E443_BRELC	1.150e-75	64.32	AP complex subunit beta n=1 Tax=Bremia lactucae Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 1..184 e-value: 9.6E-42 score: 143.2
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..185 e-value: 5.7E-69 score: 235.0
IPR026739	AP complex subunit beta	PANTHER	PTHR11134	ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT	coord: 1..185
None	No IPR available	PANTHER	PTHR11134:SF4	AP-4 COMPLEX SUBUNIT BETA-1	coord: 1..185
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1..183

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9539	contig	S-dermatodea_contig9539:1544..8440 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9539.17561.1	mRNA_S-dermatodea_contig9539.17561.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig9539 1544..8455 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig9539.17561.1 ID=prot_S-dermatodea_contig9539.17561.1|Name=mRNA_S-dermatodea_contig9539.17561.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=185bp
MTLGIDVSRLFTEMMLAIETRDLVVKKMVYLYLCTYARQKPDLAIMCINT
LQRDCNNQDPMVRGLALRSLCSLRLPAMVEYISDPLKASLVDANSYVRKT
GVMAILKMWHLWPQAVEDGAMVDTLYNMLQDNDAQVVANCVVVLNEIMAD
AGGMATNRAIIHHLLGRLEDFNEWGVCHILALVSR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002553	Clathrin/coatomer_adapt-like_N
IPR011989	ARM-like
IPR026739	AP_beta
IPR016024	ARM-type_fold