prot_S-dermatodea_contig95376.17560.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig95376.17560.1
Unique Nameprot_S-dermatodea_contig95376.17560.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length85
Homology
BLAST of mRNA_S-dermatodea_contig95376.17560.1 vs. uniprot
Match: A0A7S6UA12_9STRA (Ribosomal protein S19 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA12_9STRA)

HSP 1 Score: 168 bits (426), Expect = 6.440e-53
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
Query:    1 MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTRKKYIYKK 85
            MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTRKKYIYKK
Sbjct:    1 MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTRKKYIYKK 85          
BLAST of mRNA_S-dermatodea_contig95376.17560.1 vs. uniprot
Match: E6ZER8_ECTSI (Ribosomal protein S19 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZER8_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 4.940e-22
Identity = 51/85 (60.00%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    1 MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTRKKYIYKK 85
            MSRS WK+P I  + LK + R   E +KKP  T SR STIYPAA+GL + IHNG  M+ RKI  EMVGHKLGEF  TRK +I KK
Sbjct:    1 MSRSSWKTPFIDKSLLKRLTR---ELEKKP--TWSRRSTIYPAAVGLKIHIHNGKDMIARKIKPEMVGHKLGEFVATRKPFIPKK 80          
BLAST of mRNA_S-dermatodea_contig95376.17560.1 vs. uniprot
Match: Q94Z05_PYLLI (Ribosomal protein S19 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z05_PYLLI)

HSP 1 Score: 88.6 bits (218), Expect = 2.930e-21
Identity = 49/81 (60.49%), Postives = 57/81 (70.37%), Query Frame = 0
Query:    1 MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTRKKY 81
            MSRS WK+P I  + LK   R K +++KKP  T SR STIYPAA+GL + IHNG  MV RKI  EMVGHKLGEF  TRK +
Sbjct:    1 MSRSNWKTPFIDKSLLK---RLKPDHEKKP--TWSRRSTIYPAAVGLKLPIHNGKNMVTRKIKSEMVGHKLGEFVTTRKTF 76          
BLAST of mRNA_S-dermatodea_contig95376.17560.1 vs. uniprot
Match: A0A516ICL0_9PHAE (Ribosomal protein S19 n=3 Tax=Lessonia TaxID=105411 RepID=A0A516ICL0_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 5.150e-21
Identity = 46/85 (54.12%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    1 MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTRKKYIYKK 85
            MSRS WK+P I  + LK +      +++K K+T SR STIYPAA+GL ++IHNG  M+ R I  EMVG+KLGEF  TRK +I KK
Sbjct:    1 MSRSNWKTPFIDKSLLKQLT-----SQQKKKLTWSRRSTIYPAAVGLKLQIHNGKNMIARNIKPEMVGYKLGEFVTTRKNFIAKK 80          
BLAST of mRNA_S-dermatodea_contig95376.17560.1 vs. uniprot
Match: Q2TUF6_9PHAE (Ribosomal protein S19 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUF6_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 8.380e-21
Identity = 50/85 (58.82%), Postives = 58/85 (68.24%), Query Frame = 0
Query:    1 MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTRKKYIYKK 85
            MSRS WK+P I  + LK   R   E+ KKP  T SR STIYPA +GL ++IHNG  MV RKI  EMVGHKLGEF  TRK ++ KK
Sbjct:    1 MSRSNWKTPFIDKSLLK---RLNPEHDKKP--TWSRRSTIYPAVVGLKLRIHNGRDMVDRKIKPEMVGHKLGEFVPTRKTFVPKK 80          
BLAST of mRNA_S-dermatodea_contig95376.17560.1 vs. uniprot
Match: A0A8F0FDL3_9PHAE (Ribosomal protein S19 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0FDL3_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 8.610e-21
Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 0
Query:    1 MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTRKKYIYKK 85
            M+RS WK+P +  +FLK   R   ++++KP  T SR STIYPAA+GL + IHNG  M+ RKI  EMVGHKLGEF  TRK +I KK
Sbjct:    1 MARSNWKTPFVDKSFLK---RLTPQHERKP--TWSRRSTIYPAAVGLKLLIHNGKEMISRKIKPEMVGHKLGEFVPTRKTFIPKK 80          
BLAST of mRNA_S-dermatodea_contig95376.17560.1 vs. uniprot
Match: A0A356L7S4_9PROT (30S ribosomal protein S19 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A356L7S4_9PROT)

HSP 1 Score: 87.4 bits (215), Expect = 9.880e-21
Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    1 MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTR 78
            MSRSVWK P +HP+ LK    A  ++ +KP  T SR STI P  +GL  ++HNGN+ +   I E+M+GHKLGEFA TR
Sbjct:    1 MSRSVWKGPYVHPSVLKKTAAANEKDDRKPIKTWSRGSTIVPPMVGLTFEVHNGNKFIPVSIVEDMIGHKLGEFAPTR 78          
BLAST of mRNA_S-dermatodea_contig95376.17560.1 vs. uniprot
Match: A0A8F0FCH2_9PHAE (Ribosomal protein S19 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FCH2_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.780e-20
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    1 MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTRKKYIYKK 85
            MSRS WK+P I  + LK   R    ++KKP  T SR STIYPAA+GL + I+NG  M+ RKI  EMVGHKLGEF +TRK +I KK
Sbjct:    1 MSRSSWKTPFIDKSLLK---RLHPMHEKKP--TWSRRSTIYPAAVGLKLHIYNGKEMISRKIKPEMVGHKLGEFVMTRKTFIPKK 80          
BLAST of mRNA_S-dermatodea_contig95376.17560.1 vs. uniprot
Match: Q2TUJ8_FUCVE (Ribosomal protein S19 n=3 Tax=Fucus TaxID=3011 RepID=Q2TUJ8_FUCVE)

HSP 1 Score: 85.9 bits (211), Expect = 2.890e-20
Identity = 48/85 (56.47%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    1 MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTRKKYIYKK 85
            MSRS WK+P I  + LK++      + KK K   SR STIYPAA+GL + IHNG  M+ RKI  EMVGHKLGEF  TRK +I KK
Sbjct:    1 MSRSKWKTPFIEKSLLKNL------SIKKTKPIWSRRSTIYPAAVGLKLTIHNGKDMLTRKIKPEMVGHKLGEFVTTRKNFIPKK 79          
BLAST of mRNA_S-dermatodea_contig95376.17560.1 vs. uniprot
Match: A0A068LMD9_9PHAE (Ribosomal protein S19 n=2 Tax=Sargassum horneri TaxID=74089 RepID=A0A068LMD9_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 5.230e-20
Identity = 47/79 (59.49%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    1 MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVKIHNGNRMVFRKITEEMVGHKLGEFALTRK 79
            MSRS WK+P I  + L S  +     KKK KIT SR STIYP  +GL + IHNG  M+ RKI  EMVGHKLGEFA TRK
Sbjct:    1 MSRSNWKTPFIDKSLLTSFSK-----KKKRKITWSRRSTIYPVCVGLKLSIHNGKDMINRKIKPEMVGHKLGEFAPTRK 74          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig95376.17560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6UA12_9STRA6.440e-53100.00Ribosomal protein S19 n=1 Tax=Schizocladia ischien... [more]
E6ZER8_ECTSI4.940e-2260.00Ribosomal protein S19 n=2 Tax=Ectocarpus siliculos... [more]
Q94Z05_PYLLI2.930e-2160.49Ribosomal protein S19 n=1 Tax=Pylaiella littoralis... [more]
A0A516ICL0_9PHAE5.150e-2154.12Ribosomal protein S19 n=3 Tax=Lessonia TaxID=10541... [more]
Q2TUF6_9PHAE8.380e-2158.82Ribosomal protein S19 n=2 Tax=Desmarestia TaxID=31... [more]
A0A8F0FDL3_9PHAE8.610e-2156.47Ribosomal protein S19 n=1 Tax=Analipus japonicus T... [more]
A0A356L7S4_9PROT9.880e-2152.5630S ribosomal protein S19 n=1 Tax=Alphaproteobacte... [more]
A0A8F0FCH2_9PHAE1.780e-2057.65Ribosomal protein S19 n=1 Tax=Chorda asiatica TaxI... [more]
Q2TUJ8_FUCVE2.890e-2056.47Ribosomal protein S19 n=3 Tax=Fucus TaxID=3011 Rep... [more]
A0A068LMD9_9PHAE5.230e-2059.49Ribosomal protein S19 n=2 Tax=Sargassum horneri Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002222Ribosomal protein S19/S15PRINTSPR00975RIBOSOMALS19coord: 33..52
score: 43.79
coord: 65..80
score: 67.34
coord: 53..65
score: 33.87
IPR002222Ribosomal protein S19/S15PIRSFPIRSF002144RPS19p_RPS19a_RPS15e_RPS19ocoord: 1..85
e-value: 1.3E-25
score: 87.3
IPR002222Ribosomal protein S19/S15PFAMPF00203Ribosomal_S19coord: 3..81
e-value: 4.6E-24
score: 84.1
IPR002222Ribosomal protein S19/S15PANTHERPTHR11880RIBOSOMAL PROTEIN S19P FAMILY MEMBERcoord: 1..84
IPR002222Ribosomal protein S19/S15HAMAPMF_00531Ribosomal_S19coord: 1..85
score: 17.157
IPR023575Ribosomal protein S19, superfamilyGENE3D3.30.860.10coord: 1..85
e-value: 1.2E-26
score: 94.3
IPR023575Ribosomal protein S19, superfamilySUPERFAMILY54570Ribosomal protein S19coord: 2..84
IPR005732Ribosomal protein S19, bacterial-typeTIGRFAMTIGR01050TIGR01050coord: 1..84
e-value: 2.4E-26
score: 89.8
NoneNo IPR availablePANTHERPTHR11880:SF837S RIBOSOMAL PROTEIN S19, MITOCHONDRIALcoord: 1..84
IPR020934Ribosomal protein S19 conserved sitePROSITEPS00323RIBOSOMAL_S19coord: 53..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig95376contigS-dermatodea_contig95376:280..534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig95376.17560.1mRNA_S-dermatodea_contig95376.17560.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig95376 280..534 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig95376.17560.1 ID=prot_S-dermatodea_contig95376.17560.1|Name=mRNA_S-dermatodea_contig95376.17560.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=85bp
MSRSVWKSPSIHPNFLKSIVRAKAENKKKPKITLSRASTIYPAAIGLLVK
IHNGNRMVFRKITEEMVGHKLGEFALTRKKYIYKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002222Ribosomal_S19
IPR023575Ribosomal_S19_SF
IPR005732Ribosomal_S19_bac-type
IPR020934Ribosomal_S19_CS