mRNA_S-dermatodea_contig9536.17558.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9536.17558.1 vs. uniprot
Match: D7FY65_ECTSI (AAA_12 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY65_ECTSI) HSP 1 Score: 259 bits (663), Expect = 4.680e-80 Identity = 119/173 (68.79%), Postives = 145/173 (83.82%), Query Frame = 1
Query: 1 LISTIFYDGKLMTSEETKRARVSPQPCKWIHVSGGQVQHTGRGYSNPLEVKEVLKQARSALLHYGSHADVRVITFYNMQKRDLEREFKRHSDISHIAICSVDACQGSDADVVIISAVRSGGIGYRLSGFMLDPRRVNVALSRAKEECIVVGDKHTLRSGGGVMWRSVVDHFTS 519
++S+ FYDGKL T+EE + R+S QP KW+HVSGG+ +H GRGYSN LE+ +V+++ R+++ YG AD+RVITFYNMQKRDLEREFK DI ++ I SVD+CQGSDADVV+IS VRSGG+GY+LSGFM D RRVNVA+SRAKEECI+VGDKHTLRSGGG MWRSV DHF S
Sbjct: 520 VVSSTFYDGKLKTAEELRLTRMSHQPSKWVHVSGGETKHQGRGYSNHLEIPKVVQEVRASMHRYGREADIRVITFYNMQKRDLEREFKDKPDIKNVRIASVDSCQGSDADVVVISTVRSGGVGYKLSGFMTDRRRVNVAISRAKEECIIVGDKHTLRSGGGAMWRSVADHFKS 692
BLAST of mRNA_S-dermatodea_contig9536.17558.1 vs. uniprot
Match: A0A6H5JRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT8_9PHAE) HSP 1 Score: 136 bits (342), Expect = 5.570e-34 Identity = 58/101 (57.43%), Postives = 80/101 (79.21%), Query Frame = 1
Query: 1 LISTIFYDGKLMTSEETKRARVSPQPCKWIHVSGGQVQHTGRGYSNPLEVKEVLKQARSALLHYGSHADVRVITFYNMQKRDLEREFKRHSDISHIAICSV 303
++S+ FYDGKL T+EE + R+S QPCKW+HVSGG+ +H GRGYSN LE+ +V+++ R+++ YG+ AD+RV TFYNMQKRDLER+FK D+ H+ I SV
Sbjct: 614 VVSSTFYDGKLKTAEELRLTRMSHQPCKWVHVSGGETKHQGRGYSNHLEIPKVVEEVRASIQRYGTEADIRVNTFYNMQKRDLERDFKHQPDMKHVRIVSV 714
BLAST of mRNA_S-dermatodea_contig9536.17558.1 vs. uniprot
Match: E1ZLN5_CHLVA (Expressed protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZLN5_CHLVA) HSP 1 Score: 119 bits (298), Expect = 5.260e-28 Identity = 70/180 (38.89%), Postives = 97/180 (53.89%), Query Frame = 1
Query: 4 ISTIFYDGKLMTSEETKRARVSPQPCKWIHVSGGQVQHTGRGYSNPLEVKEVLKQARSA---LLHYG-SHADVRVITFYNMQKRDLEREFKRHSDISHIAIC---SVDACQGSDADVVIISAVRS---GGIGYRLSGFMLDPRRVNVALSRAKEECIVVGDKHTLRSGGGVMWRSVVDHF 513
IS FY +L T+ R +PC+ + V G +V H G GYSNP+E + ++ AR A L G H + +IT YN Q+ LER + + C S+DACQG +AD V++S VR+ G LS F D RRVNVA+SRA+ C+VVG +TLR W +V+ +
Sbjct: 566 ISAEFYADRLHTAAAAAARRALAEPCRMVQVGGKEVWHQGGGYSNPVEASKAVRVARKAAKELRELGIRHPTIYIITIYNRQRDLLERLVAKEPALRGACDCQVLSIDACQGDEADAVVVSTVRNAFCGSENQHLSSFFRDRRRVNVAMSRARHLCVVVGSLYTLRLPKARPWSAVLADY 745
BLAST of mRNA_S-dermatodea_contig9536.17558.1 vs. uniprot
Match: R1E0W5_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E0W5_EMIHU) HSP 1 Score: 109 bits (272), Expect = 1.670e-24 Identity = 68/172 (39.53%), Postives = 100/172 (58.14%), Query Frame = 1
Query: 1 LISTIFYDGKLMTSEETKRARVSPQPCKWIHVSGGQVQHTGRGYSNPLEVKEVLKQARSALLHYG-SHADVRVITFYNMQKRDLEREFKRHSDISHIAICSVDACQGSDADVVIISAVRS---GGIGYRLSGFMLDPRRVNVALSRAKEECIVVGDKHTLRSGGGVMWRSVV 504
++S+ FY KLMT+ T RAR P P +++V+GG + R N E +EV+ A + + G S + V++FYN Q+ LER R + + +A+ SVD+ QG +ADV+I+S VR+ GG+G F+ D RRVNVALSRA+E +V G L +WRS +
Sbjct: 519 IVSSTFYFNKLMTAPSTARARQHPLPACFVNVTGGHEEFQERSCFNKKEAEEVVSLALHCVEYLGFSQERINVLSFYNAQRDILERMLAR-AQLEDVAVLSVDSMQGREADVIILSCVRADVAGGLG-----FVADARRVNVALSRARESLVVCGSSVCLEVER--IWRSAL 682
BLAST of mRNA_S-dermatodea_contig9536.17558.1 vs. uniprot
Match: R1DL56_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DL56_EMIHU) HSP 1 Score: 108 bits (269), Expect = 4.040e-24 Identity = 64/155 (41.29%), Postives = 94/155 (60.65%), Query Frame = 1
Query: 1 LISTIFYDGKLMTSEETKRARVSPQPCKWIHVSGGQVQHTGRGYSNPLEVKEVLKQARSALLHYG-SHADVRVITFYNMQKRDLEREFKRHSDISHIAICSVDACQGSDADVVIISAVRS---GGIGYRLSGFMLDPRRVNVALSRAKEECIVVG 453
++S+ FY KLMT+ T RAR P P +++V+GG + R N E +EV+ A + + G S + V++FYN Q+ LER R + + +A+ SVD+ QG +ADV+I+S VR+ GG+G F+ D RRVNVALSRA+E +V G
Sbjct: 406 IVSSTFYFNKLMTAPSTARARQHPLPACFVNVTGGHEEFQERSCFNKKEAEEVVSLALHCVEYLGFSQERINVLSFYNAQRDILERMLAR-AQLEDVAVLSVDSMQGREADVIILSCVRADVAGGLG-----FVADARRVNVALSRARESLVVCG 554
BLAST of mRNA_S-dermatodea_contig9536.17558.1 vs. uniprot
Match: A0A7S4MYX4_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4MYX4_GUITH) HSP 1 Score: 104 bits (259), Expect = 7.850e-23 Identity = 62/173 (35.84%), Postives = 104/173 (60.12%), Query Frame = 1
Query: 4 ISTIFYDGKLMTSEETKRARVSPQPCKWIHVSGGQVQHTGRG-YSNPLEVKEVLKQARSALLHYGSHA--DVRVITFYNMQKRDLEREFKRHSDISHIAICSVDACQGSDADVVIISAVRSGGIGYRLSGFMLDPRRVNVALSRAKEECIVVGDKHTLRSGGGVMWRSVVDHF 513
+S FY GKL T ET +AR P P ++HVSG + + + N +E VL+ + A+++ G H +V V++FYN QK + ++ + ++ + + SVD+ QG +A+VV++S VR+ G GF+ D RRVNVA+SRA++ +V+GD+ L +W+SV+ ++
Sbjct: 334 VSREFYRGKLKTDSETAQARSHPLPASFVHVSGIESKPSNSSSLMNDMEADAVLEIVQ-AMINSGVHTQREVVVLSFYNGQKSIISKKLLK-KNLGDVEVMSVDSMQGREAEVVVLSCVRTLAGGS--VGFLADRRRVNVAISRARQSLVVIGDEQALMQNK--LWKSVLSYY 500
BLAST of mRNA_S-dermatodea_contig9536.17558.1 vs. uniprot
Match: A0A2P6VHN8_9CHLO (Putative ATP-dependent helicase-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VHN8_9CHLO) HSP 1 Score: 94.0 bits (232), Expect = 4.650e-20 Identity = 66/187 (35.29%), Postives = 95/187 (50.80%), Query Frame = 1
Query: 4 ISTIFYDGKLMTSEETKRARVS-PQPCKWIHVSGGQVQHTGRGYSNPLEVKEVLK---QARSALLHYG-SHADVRVITFYNMQKRDL-------EREFKRHSDISHIAICSVDACQGSDADVVIISAVR----SGGIGYRLSGFMLDPRRVNVALSRAKEECIVVGDKHTLRSGGGVMWRSVVDHFT 516
+S FY G+L T AR + PC+ + V G + G++N + ++ +A ALL G H + +IT YN Q RDL RE +R + ++ SVDACQG + D VI+S VR S LS F D RR+NVA+SRA+ C+VVG+K TL W +V+ ++
Sbjct: 95 VSNEFYAGRLRTPAAVAAARAAVASPCRLVDVWGREHWWDMAGFNNKTGAEAAIRAAGEALVALLGIGVQHPTIYIITLYNRQ-RDLLKLLLERSREGRRLAAACSCSVLSVDACQGDEVDAVIVSTVRNVFNSNCKSLNLSKFFRDRRRINVAMSRARYMCVVVGNKRTLNVPKAKPWGAVLTGYS 280
BLAST of mRNA_S-dermatodea_contig9536.17558.1 vs. uniprot
Match: A0A485LI69_9STRA (Aste57867_20915 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI69_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 8.680e-19 Identity = 63/172 (36.63%), Postives = 95/172 (55.23%), Query Frame = 1
Query: 1 LISTIFYDGKLMTSEETKRARVSPQPCKWIHVSGGQVQHTGRGYSNPLEVKEVLKQARSALLHYGSHAD--VRVITFYNMQKRDLEREFKRHSDISHIAICSVDACQGSDADVVIISAVRSGGIGYRLSGFMLDPRRVNVALSRAKEECIVVGDKHTLRSGGGVMWRSVVDH 510
L+S +FY KL T+ T +AR PQP +++ V G Q + G + N LEV++V+ R + +G+ + VI F+ Q+ L+ + ++ + +VDA QG +ADV+++S V S G GF+ R+NVALSRAKE +VG TLRS WR V+ H
Sbjct: 332 LVSDLFYKKKLKTALVTTKARQRPQPLQFVQVHGCQ-EPQGTSWFNELEVEQVVSIVR---IEHGADPTLLINVICFHKPQRAKLQAALWH--EFPNVDVVTVDAMQGREADVIVLSCVCSEG----RVGFLKHRPRINVALSRAKEMLYIVGHGPTLRSNAD--WRQVLAH 491
BLAST of mRNA_S-dermatodea_contig9536.17558.1 vs. uniprot
Match: A0A7S0GNV1_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GNV1_MICPS) HSP 1 Score: 92.4 bits (228), Expect = 1.020e-18 Identity = 56/163 (34.36%), Postives = 80/163 (49.08%), Query Frame = 1
Query: 16 FYDGKLMTSEETKRARVSPQPCKWIHVSGGQ-VQHTGRGYSNPLEVKEVLKQARSALLHYGSHADVRVITFYNMQKRDLEREFKRHSDISHIAICSVDACQGSDADVVIISAVRSGGIGYRLSGFMLDPRRVNVALSRAKEECIVVGDKHTLRSGGGVMWRSV 501
F K+ T +K S + W+ VSG + G Y N LEV + AR +G + +TFY Q L + + +VDACQGS+ D V+IS R+ R GF+ DPRR+NVA+SRAK +C+++GD T+ G W +V
Sbjct: 56 FDAHKVTTDVSSKDEDDSKRAMVWVQVSGWEETPEEGTSYVNRLEVAATVAAARRVRERHGPRCSIAALTFYKGQYLALMDAMPASLGVECL---TVDACQGSEFDFVLISTTRAND--RRAVGFVSDPRRINVAISRAKRQCVILGDARTMAGRPGTDWHAV 213
BLAST of mRNA_S-dermatodea_contig9536.17558.1 vs. uniprot
Match: A0A2E0WEP8_9MICO (HIT domain-containing protein n=1 Tax=Micrococcales bacterium TaxID=2026762 RepID=A0A2E0WEP8_9MICO) HSP 1 Score: 91.7 bits (226), Expect = 2.740e-18 Identity = 66/176 (37.50%), Postives = 91/176 (51.70%), Query Frame = 1
Query: 7 STIFYDGKLMTSEETKRARVSPQP-----CKWIHVSGGQVQHTGRGYSNPLEVKEVLKQARSALLHYGSHADVRVITFYNMQKRDLEREFKRHSDISHIAICSVDACQGSDADVVIISAVRSGGIGYRLSGFMLDPRRVNVALSRAKEECIVVGDKHTLRSGGGVMWRSVVDHFTS 519
+ +FYDG L + R P P W HV+ G+ GY+N EV V + H D+ VIT Y+ Q+ L + D +AI SVDA QG + D ++ISAVRS R GF+ DPRR+NVAL+RA+ +V+GD TL S +W+++VDH S
Sbjct: 974 NAMFYDGLLEDGVTAEDRRGVPFPGGNGVVMWWHVAEGE-SPVRSGYANHAEVDAVCQVVVYLAGKGIPHHDIGVITPYDAQRALLLARLR--GDAPLLAIDSVDAFQGDERDYIVISAVRSNS--SRSIGFVSDPRRLNVALTRARRGLVVIGDAVTLSSCK--LWKALVDHVAS 1142 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9536.17558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9536.17558.1 >prot_S-dermatodea_contig9536.17558.1 ID=prot_S-dermatodea_contig9536.17558.1|Name=mRNA_S-dermatodea_contig9536.17558.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=174bp LISTIFYDGKLMTSEETKRARVSPQPCKWIHVSGGQVQHTGRGYSNPLEVback to top mRNA from alignment at S-dermatodea_contig9536:3620..5557+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9536.17558.1 ID=mRNA_S-dermatodea_contig9536.17558.1|Name=mRNA_S-dermatodea_contig9536.17558.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1938bp|location=Sequence derived from alignment at S-dermatodea_contig9536:3620..5557+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9536:3620..5557+ >mRNA_S-dermatodea_contig9536.17558.1 ID=mRNA_S-dermatodea_contig9536.17558.1|Name=mRNA_S-dermatodea_contig9536.17558.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at S-dermatodea_contig9536:3620..5557+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |