mRNA_S-dermatodea_contig9534.17556.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig9534.17556.1 vs. uniprot
Match: A0A6H5JUF8_9PHAE (APG6 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF8_9PHAE) HSP 1 Score: 448 bits (1153), Expect = 1.250e-147 Identity = 253/404 (62.62%), Postives = 287/404 (71.04%), Query Frame = 2
Query: 2 QVRMYREAMEHLMAAPTQTDPLQADESANPVETPDTGGKRASR----FEDGACFMEDTEGAHGS-PGLGCQGGHGAP-VGGGQQSSFSSN-----RQEEFAASCGGVSATSSNAHRPSKGAHMHIWGLIEDTVGRIGAEAAGWMAQTGANRECHSLVEEMDRVRKKRAVVWREREQVAQSKAELARCRGELLSRGIVLDARRSDLAEARQNCRTRKALYSEQLVQAMNMGALNDSFLIWQQGPFATINGFRVGRLNGQLVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSGDGRVLYSLHTDESFSLFPRRSFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGNSLEDWTRALKYMLTDLKWIAAWAAKYLPPC 1180
QVRMYREAMEHL+AAP+ P + A+P+ T T G F G ++T+ A G+ P + GG A V G S S + ++E S S+A + IWG I VG IG AGWMAQ+ A RE H L+ E+ +VR++RA VW+ERE +A+++AE SD+A+ARQNCR+RKALYSEQLV AM MGALND F IW QGPF TINGFRVGRLN +VDWQEVNAGVGQAAIVLVTVAMAMGVEF+KYLIAPCGSFTKIARS DGRVLYSLHTDESFSLFPRR+FN ALKAFLHCLGEVGDHVQEHDPTL+LPYHIKEKEGTVGGLPVALG+S EDWTRALKYMLTDLKWIAAWAAKYLPPC
Sbjct: 16 QVRMYREAMEHLIAAPSAAYPAASQSRASPIST--TAGVAQENLSKIFAGGENDPDNTKPAPGAIPDVATTGGAKAEAVAEGDDDSVSDHGRGGTKKEVPRLSSDDAEGAESSAGSTAAEKGPSIWGFIGGAVGWIGEGTAGWMAQSEARREHHRLLGEVGKVRRRRAAVWQERELLAKARAEXXXXXXXXXXXXXXXXXXXSDVADARQNCRSRKALYSEQLVSAMRMGALNDCFHIWHQGPFGTINGFRVGRLNTHVVDWQEVNAGVGQAAIVLVTVAMAMGVEFTKYLIAPCGSFTKIARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLKLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLPPC 417
BLAST of mRNA_S-dermatodea_contig9534.17556.1 vs. uniprot
Match: A0A836CRQ0_9STRA (Autophagy protein Apg6-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRQ0_9STRA) HSP 1 Score: 212 bits (539), Expect = 3.770e-57 Identity = 132/339 (38.94%), Postives = 175/339 (51.62%), Query Frame = 2
Query: 341 IWGLIEDTVGRIGAEAAGWMAQTGANRECHSLVEEMDRVRKKRAVVWREREQVAQS----------------------------------KAELARCRGELLSRGIVLDARRSDLAEARQNCRTRKALYSEQLVQAMNMGALNDSFLIWQQGPFATINGFRVGRLNGQLVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYL-------------IAPCGSFTKIARSGDG----------------RVLYSLHTDESFSLFPRRSFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGNSLEDWTRALKYMLTDLKWIAAWAAKY 1168
+WG + D V R+ + GA E +L E+ V+ +R V REREQVAQ +A+L R ++ R + L+A + L E +CR R+AL +L + ND+F IW G ATINGFRVGRL V W E+NAG+GQAAI L VA AM ++FS+Y+ + P GSF+++A S R L++L +DE FSLFP RS N AL+AF C+GE G + DPTL LP+ + + GTVGG PVALG+ LE WTRA+KY LT+LKW+ AW AKY
Sbjct: 76 VWGFLGDAVHRL--------SLMGAVPEEDALAGELRGVQARRRAVQREREQVAQRCVGGNVEXXXXXXXXXXXXXXXXXXXXXXXXXXRRADLLSARAQVDERTLCLEAEIAALGEEVASCRQRRALADARLARLSGTHVANDAFHIWYAGALATINGFRVGRLPSVQVGWPEINAGLGQAAIALTLVAGAMKLKFSRYIPTYARAEPPSRHAVLPLGSFSRMAASNXXXXXXXXXXXXXXXXXXRTLHALFSDEGFSLFPHRSLNAALRAFAQCVGEAGQRAAQRDPTLALPHRVDDAAGTVGGAPVALGSDLEAWTRAMKYTLTNLKWLLAWVAKY 406
BLAST of mRNA_S-dermatodea_contig9534.17556.1 vs. uniprot
Match: A0A7S3H0Z9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H0Z9_9STRA) HSP 1 Score: 166 bits (420), Expect = 3.130e-42 Identity = 78/173 (45.09%), Postives = 110/173 (63.58%), Query Frame = 2
Query: 653 MGALNDSFLIWQQGPFATINGFRVGRLNGQLVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSGDGRVLYSLHTDE-SFSLFPRRSFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGNSLEDWTRALKYMLTDLKWIAAWAAKY 1168
+ LND+F +W GPFATIN F++G L + V+ E+NA +GQAA+VL + G+EF ++ I P GSF KI ++ D R Y L D SFS FP+R+FNLAL F+ C+ E+G+++ +DPTL +PY I+ E + G E WT ALK+ML ++KWI AW K+
Sbjct: 132 INTLNDAFYVWYTGPFATINAFKLGNLVNKPVESTEINAALGQAALVLNIITSRCGIEFKQFHIVPMGSFAKILKADDRRTSYPLFIDAGSFSFFPKRNFNLALSGFMQCIHELGEYISAYDPTLSVPYKIEVSESKIADKSFVYGGDEEVWTHALKHMLANIKWIIAWYCKH 304
BLAST of mRNA_S-dermatodea_contig9534.17556.1 vs. uniprot
Match: A0A3M6V8C9_9STRA (APG6 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8C9_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.230e-38 Identity = 76/167 (45.51%), Postives = 104/167 (62.28%), Query Frame = 2
Query: 665 NDSFLIWQQGPFATINGFRVGRLNGQLVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSGDGRVLYSLHTDESFSLFPRRSFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGNSLEDWTRALKYMLTDLKWIAAWAAK 1165
ND F IW G F TING R+GRL + V+W E+NA +GQA ++L T+A G EFS+ + P GSF+++ +LYS +F RR FN A+ FL C+ + G + +P L+ PY ++ G +GGLP++LGN E WTRALKYMLT LKW+ AW +K
Sbjct: 12 NDVFHIWHDGLFGTINGLRLGRLPSKPVEWVEINAAMGQAVLLLATIADRAGFEFSRNRLVPRGSFSRVVN-----ILYS-----DGGMFRRRGFNQAMILFLECVEDAGRRAMKEEPLLKFPYKVER--GKIGGLPISLGND-EQWTRALKYMLTHLKWLLAWISK 165
BLAST of mRNA_S-dermatodea_contig9534.17556.1 vs. uniprot
Match: A0A1V9ZC45_9STRA (Beclin-1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC45_9STRA) HSP 1 Score: 160 bits (405), Expect = 9.900e-38 Identity = 103/287 (35.89%), Postives = 154/287 (53.66%), Query Frame = 2
Query: 320 SKGAHMHIWGLIEDTVGRIGAEAAGWMAQTGANRECHSLVEEMDRVRKKRAVVWREREQVAQSKAELARCRGELLSRGIVLDARRSDLAEARQNCRTRKALYSEQLVQAMNMGALNDSFLIWQQGPFATINGFRVGRLNGQLVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSG--DGRVLYSLHTDESFSLFPRRSFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGNSLEDWTRALKYMLTDLKWIAAWAAKYLP 1174
SK +HM W ED G I E+ ++ + +L E + + ++ V+ R RE + ELA + + G ++ + E R + T S+ L +ND+F IW +G F TING R+GRL + V+W E+NA +GQA ++L TVA ++F+++ GS++K+ S + R Y L++D SF F R+ FN AL FL C+ E G +PTLR PY I + G +G L +++G + E WTRALKY+LT LKW+ AW AK P
Sbjct: 336 SKPSHMS-WQDDEDN-GDIDLES---LSMEELESKSAALSEILRLINEESQVILRNRELIWSCATELASLQHQTFDEGAIVQLASTFTKEERTSVGTFAVHASDMLRCLQRYNVMNDTFHIWHEGSFGTINGLRLGRLPSKPVEWTEINAALGQATLLLATVASRANLQFARHTPVARGSYSKMLTSHGKERRREYPLYSDGSF--FQRQKFNQALVFFLECVDEAGQRAMREEPTLRFPYKIFK--GKIGELAISVGGNDEQWTRALKYLLTHLKWLLAWVAKRYP 613
BLAST of mRNA_S-dermatodea_contig9534.17556.1 vs. uniprot
Match: T0RCX9_SAPDV (APG6 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RCX9_SAPDV) HSP 1 Score: 160 bits (406), Expect = 1.210e-37 Identity = 94/237 (39.66%), Postives = 133/237 (56.12%), Query Frame = 2
Query: 470 AVVWREREQVAQSKAELARCRGELLSRGIVLDARRSDLAEARQNCRTRKALYSEQLVQAMNMGALNDSFLIWQQGPFATINGFRVGRLNGQLVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKI--ARSGDGRVLYSLHTDESFSLFPRRSFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGNSLEDWTRALKYMLTDLKWIAAWAAKYLP 1174
A+V R RE + ELA + + G V+ + E R + T S+ L ND+F IW +G F TING R+GRL + V+W E+NA +GQA ++L TVA + F+++ GS++K+ A+S D R Y L++D SF F R+ FN AL FL C+ E G +P+LR PY I + G +G L +++G + E WTRALKY+LT LKW+ AW AK P
Sbjct: 429 AMVLRNRELIWSCATELATLQRDSFDHGAVVQLLHASTKEERSSVSTFAVHASDVLRCLQRYNVFNDTFHIWHEGSFGTINGLRLGRLPSKPVEWAEINAALGQATLLLATVAGRANLTFARHTPVARGSYSKMLTAQSKDKRKEYPLYSDGSF--FQRQKFNQALVFFLECVDEAGVRAMREEPSLRFPYKIYK--GKIGELAISVGGNDEQWTRALKYLLTHLKWLLAWIAKRYP 661
BLAST of mRNA_S-dermatodea_contig9534.17556.1 vs. uniprot
Match: A0A4D9D4J3_9STRA (APG6 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4J3_9STRA) HSP 1 Score: 150 bits (380), Expect = 4.170e-37 Identity = 85/218 (38.99%), Postives = 126/218 (57.80%), Query Frame = 2
Query: 578 DLAEARQNCRTRKALYSEQLVQAMNMGALNDSFLIWQQGPFATINGFRVGRLNG-QLVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSG------DGRVL-----------YSLHTDES-FSLFPRRSFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGNSLED-WTRALKYMLTDLKWIAAWAAKYL 1171
DL+E Q + +L + ND F +W GPFAT+NG +GRL V+W ++NAG+GQA ++L T+ G F + + P GSF+KI RS + +V+ S + DE+ + FPRR+ N AL AFL C+ E G HV+ DPT+RLP+ +++ + +GGLP+ ED W RALKY+LTDLKW++AW+A+++
Sbjct: 63 DLSENHQATHGSELSAGARLEALTQLNVANDCFHVWHSGPFATMNGCSIGRLPAFAAVEWIDINAGLGQAILLLDTLVKQTGFRFRRLELVPFGSFSKILRSPCDLSDVETKVMPNSPRFTASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQDNK--IGGLPIVFTPGEEDTWNRALKYLLTDLKWLSAWSARHV 278
BLAST of mRNA_S-dermatodea_contig9534.17556.1 vs. uniprot
Match: A0A067BKQ5_SAPPC (APG6 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BKQ5_SAPPC) HSP 1 Score: 150 bits (379), Expect = 4.370e-37 Identity = 78/169 (46.15%), Postives = 108/169 (63.91%), Query Frame = 2
Query: 665 NDSFLIWQQGPFATINGFRVGRLNGQLVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKI--ARSGDGRVLYSLHTDESFSLFPRRSFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGNSLEDWTRALKYMLTDLKWIAAWAAK 1165
ND+F IW +G F TING R+GRL + V+W E+NA +GQA ++L TVA + F+++ GS++K+ A S D R Y L++D SF F R+ FN AL FL C+ E G +P+LR PY I + G +G L +++G + E WTRALKY+LT LKW+ AW AK
Sbjct: 97 NDTFHIWHEGSFGTINGLRLGRLPSKPVEWAEINAALGQATLLLATVASRANLNFARHTPVARGSYSKMLTAPSKDKRKEYPLYSDGSF--FQRQKFNQALVFFLECVDEAGVRAMREEPSLRFPYKIYK--GKIGELAISVGGNDEQWTRALKYLLTHLKWLLAWIAK 261
BLAST of mRNA_S-dermatodea_contig9534.17556.1 vs. uniprot
Match: A0A7S2C4Q6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C4Q6_9STRA) HSP 1 Score: 147 bits (372), Expect = 6.130e-37 Identity = 79/189 (41.80%), Postives = 114/189 (60.32%), Query Frame = 2
Query: 632 QLVQAMNMGALNDSFLIWQQGPFATINGFRVGRLNGQLVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIA-RSGDGRV-----LYSLHTDES--FSLFPRRSFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGNSLED--WTRALKYMLTDLKWIAAWAAKY 1168
QL M A ND F IW GPF TINGFR+GRL + V+W E+NA +GQ A++L T+ ++ S L+ P GS++++A + G+V ++L+ + S + SF+ AL+ L +GE G+++ E DP RLPY + E + +P+ G S D WTRALK+MLTD+KWI AWAAK+
Sbjct: 15 QLEATSQMNAANDCFYIWHAGPFGTINGFRLGRLPVETVEWHEINAALGQVALLLETIENETPLQLSLTLL-PLGSYSQVAIPNSQGKVDEKSKRFNLYASDGGVLSFGQKGSFHKALEYLLQIIGEAGNYISEQDPAFRLPYAVSEGGRYINNIPITYGGSNSDELWTRALKFMLTDVKWIVAWAAKH 202
BLAST of mRNA_S-dermatodea_contig9534.17556.1 vs. uniprot
Match: A0A2R5GQB8_9STRA (Beclin-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQB8_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.520e-36 Identity = 81/194 (41.75%), Postives = 117/194 (60.31%), Query Frame = 2
Query: 584 AEARQNCRTRKALYSEQLVQAMNMGALNDSFLIWQQGPFATINGFRVGRLNGQLVDWQEVNAGVGQAAIVLVTVAMAMGVEFSKYLIAPCGSFTKIARSGDGRVLYSLHTDESFSLFPRRSFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGNSLEDWTRALKYMLTDLKWIAAWAAK 1165
AE+ ++ +TR + + M LND+F IW F ING R+GRL V+W E+NA GQAA++L T+A + FSKY + P GS +K+A+ G+ R Y L +++ F + SF A+ L+C+ E+G+H ++ D T+ LPY I + VGGL V +G S E WTRALK L DLKW+ AW++K
Sbjct: 156 AESLESLQTRIDTAHGRRLALMQTHVLNDAFCIWYDDDFGVINGLRLGRLPSVPVEWSEINAAWGQAALLLATLATEVNFSFSKYRVVPMGSASKLAKVGNERTSYELFHTSNYTFF-KSSFENAMICILYCVRELGEHAEKTDRTMCLPYAIDGDK--VGGLSVRIGGSDEVWTRALKNFLADLKWLLAWSSK 346 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9534.17556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9534.17556.1 >prot_S-dermatodea_contig9534.17556.1 ID=prot_S-dermatodea_contig9534.17556.1|Name=mRNA_S-dermatodea_contig9534.17556.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=391bp MYREAMEHLMAAPTQTDPLQADESANPVETPDTGGKRASRFEDGACFMEDback to top mRNA from alignment at S-dermatodea_contig9534:529..7618- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9534.17556.1 ID=mRNA_S-dermatodea_contig9534.17556.1|Name=mRNA_S-dermatodea_contig9534.17556.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7090bp|location=Sequence derived from alignment at S-dermatodea_contig9534:529..7618- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9534:529..7618- >mRNA_S-dermatodea_contig9534.17556.1 ID=mRNA_S-dermatodea_contig9534.17556.1|Name=mRNA_S-dermatodea_contig9534.17556.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2346bp|location=Sequence derived from alignment at S-dermatodea_contig9534:529..7618- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |