prot_S-dermatodea_contig9527.17550.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9527.17550.1
Unique Nameprot_S-dermatodea_contig9527.17550.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length96
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9527.17550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 4..56
e-value: 0.0011
score: 28.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 4..56
score: 10.276
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..80
e-value: 3.9E-11
score: 44.3
IPR027370RING-type zinc-finger, LisH dimerisation motifPFAMPF13445zf-RING_UBOXcoord: 4..54
e-value: 2.8E-8
score: 33.6
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 3..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9527contigS-dermatodea_contig9527:1693..3885 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9527.17550.1mRNA_S-dermatodea_contig9527.17550.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9527 1692..3885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9527.17550.1 ID=prot_S-dermatodea_contig9527.17550.1|Name=mRNA_S-dermatodea_contig9527.17550.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=96bp
MDSCPVCYATFSCGNSEPETVARQLPCEHVACTQCLEDCWEEEVAKEESG
VRCPECFELFAFESVQSVPQLQAAGEGGQDAGQNGLRSEALQETG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR027370Znf-RING_LisH