prot_S-dermatodea_contig9523.17545.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9523.17545.1
Unique Nameprot_S-dermatodea_contig9523.17545.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length540
Homology
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BLAST of mRNA_S-dermatodea_contig9523.17545.1 vs. uniprot
Match: D8LKY8_ECTSI (Pleckstrin homology (PH) domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKY8_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 8.730e-52
Identity = 211/598 (35.28%), Postives = 254/598 (42.47%), Query Frame = 0 
Query:    7 WSMGSTHGPLVASAPRSVWVPGKDGQ---KSLRLVDFSLPMWAGDRTSCGCLSHTELKWGKEGLAVSGGASMAGALAAALGNEAAWSPFLTSRGSFRWGLLAYALDSAFRDGGLDEKKNASL---RVSCMVTMKPSERMGLRLRDLHPGCGGGVVVVGFESKAAGKRAGIKQGDRIVRVEDVAVGRTSD----IIWAMSQAPAESS-DGAGRSVLLTL-LRGFPKSDR---------------------------PWLPPLDPSPAPTILSPPSSAVESRSDEDFSPLAVLSAPGSKTFSGNFSSVHRP------GFGGESSGAKDNGVRGSLPDATGLGEGSPMLGGMGLLGAAPPSPAAKVSLSXXXXXXEDKAELEVPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPAPPQANVNAGGDPAKPFSAHN----RKLSHQGRLLPG-------SLGAGVGIALEACWACHPDDRSPMSDDENSRPMVY---KPEEVSAAVADTDRPTSESIEKLRGAVVGTCIGVAAADEGGGEEEEFQDTR-----SNDSGSSDASSLFLTAVSPSRIPPPLVSIASSMPAPPVSMTSS 540
            WS+ S H P+ ASAPRSVWVPGK+G     SLRLV+F LP WAG RTSCGCLSHTEL WGK+ LA  G     G +A  + +   WSP      S   G+ A       + GG  + ++ +    +V+ +++M+PSE MGLRLRD+HP CGGGVVV+GFE  AAGKRAG+ QGDRI  V +       D    +   +  AP   +  G G S   TL   GF                                P +P  D     T ++P             SP AVLSAPG KTFSG   +  R       GFG   SGA D                                        XXXXXX     L V                                    PAP QANVNAGGDPA PF+          S +G+           SL  GVG AL ACW     +     +DENSRP  +     EEV        R     +  +      T             +E F D       S+ SGSS  SSL LTAVSPSR+PPPLVS+AS    PPVS  SS
Sbjct:  460 WSVAS-HSPMAASAPRSVWVPGKNGSHKTSSLRLVEFCLPPWAGVRTSCGCLSHTELTWGKDSLAAGGQDQGLGGVAGGM-SGVGWSP--NGGDSRNVGVGAAPYSDLRQSGGTPQPRSGTTSPRKVALVISMRPSEPMGLRLRDVHPECGGGVVVIGFERSAAGKRAGVLQGDRITEVNESPASGEDDEDASVPSPVLSAPGRKTFSGRGTSGNNTLGFAGFYSGXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPRVP--DNITVNTPVAP-------------SPEAVLSAPGRKTFSGGGGAARRSSKSGSLGFG--FSGADDXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXHALTLAVDNPPSPDETKGDEDSGEWGDSNGSADSTGGGRPLKVPAPTQANVNAGGDPAVPFATFRGGGRATPSREGQXXXXXXXXXMPSLRLGVGSALAACWGVQETN----DNDENSRPTEFDLGNSEEVEVEERIVVRKPPPVLVAMSRGTSATXXXXXXXXXXXXXDEVFGDDARSAAGSSGSGSSRDSSLLLTAVSPSRVPPPLVSVASWGTLPPVSRASS 1027
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9523.17545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKY8_ECTSI8.730e-5235.28Pleckstrin homology (PH) domain-containing protein... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.42.10coord: 120..221
e-value: 1.0E-6
score: 30.4
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 137..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9523contigS-dermatodea_contig9523:4741..8409 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9523.17545.1mRNA_S-dermatodea_contig9523.17545.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9523 4741..8421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9523.17545.1 ID=prot_S-dermatodea_contig9523.17545.1|Name=mRNA_S-dermatodea_contig9523.17545.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=540bp
MSRLSRWSMGSTHGPLVASAPRSVWVPGKDGQKSLRLVDFSLPMWAGDRT
SCGCLSHTELKWGKEGLAVSGGASMAGALAAALGNEAAWSPFLTSRGSFR
WGLLAYALDSAFRDGGLDEKKNASLRVSCMVTMKPSERMGLRLRDLHPGC
GGGVVVVGFESKAAGKRAGIKQGDRIVRVEDVAVGRTSDIIWAMSQAPAE
SSDGAGRSVLLTLLRGFPKSDRPWLPPLDPSPAPTILSPPSSAVESRSDE
DFSPLAVLSAPGSKTFSGNFSSVHRPGFGGESSGAKDNGVRGSLPDATGL
GEGSPMLGGMGLLGAAPPSPAAKVSLSVAPPSPEDKAELEVPLDVPLDVP
VDLSGDLSGSGHGTGDSADSSAGRAKGPAPPQANVNAGGDPAKPFSAHNR
KLSHQGRLLPGSLGAGVGIALEACWACHPDDRSPMSDDENSRPMVYKPEE
VSAAVADTDRPTSESIEKLRGAVVGTCIGVAAADEGGGEEEEFQDTRSND
SGSSDASSLFLTAVSPSRIPPPLVSIASSMPAPPVSMTSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf