prot_S-dermatodea_contig9521.17544.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9521.17544.1
Unique Nameprot_S-dermatodea_contig9521.17544.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length123
Homology
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: D8LLB1_ECTSI (Tryptophan synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB1_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 1.360e-54
Identity = 100/128 (78.12%), Postives = 108/128 (84.38%), Query Frame = 0
Query:    1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 122
            NSATLT G+PGV HG RTYLLQD DGQI ETHSISAGL+Y GVGPE SWLKDSGRA+YAAVTDVQALEAL LLA+TEGLISALEPSHA      MAK +  D+IVLVNLCGRG+KDM+ VAK L EDV
Sbjct:  614 NSATLTQGSPGVLHGTRTYLLQDEDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYAAVTDVQALEALQLLARTEGLISALEPSHAVYHAMQMAKGMSPDQIVLVNLCGRGDKDMHTVAKYLGEDV 741          
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A835YTN0_9STRA (Tryptophan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN0_9STRA)

HSP 1 Score: 181 bits (459), Expect = 5.660e-51
Identity = 93/128 (72.66%), Postives = 103/128 (80.47%), Query Frame = 0
Query:    1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 122
            NSATLT+G PGV HG RTYLLQD DGQI ETHSISAGL+Y GVGPE +WLKDSGRADY AVTD QALE L  LA+TEGLISALEPSHA      +AK LP D+IVL+N+CGRG+KDM+ VAK L   V
Sbjct:  632 NSATLTMGKPGVLHGTRTYLLQDKDGQIPETHSISAGLDYPGVGPEHAWLKDSGRADYVAVTDKQALEGLQTLARTEGLISALEPSHAIYHGMQLAKTLPKDKIVLINMCGRGDKDMHTVAKYLGVQV 759          
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: H6WB94_VAULI (Tryptophan synthase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB94_VAULI)

HSP 1 Score: 178 bits (452), Expect = 1.900e-50
Identity = 91/128 (71.09%), Postives = 102/128 (79.69%), Query Frame = 0
Query:    1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 122
            NSATLT+GTPGV HG RTYLLQD +GQI ETHSISAGL+Y GVGPE +WLKDSGRA+Y A TD QALE L  LAQ EGLISALEPSHA      +AK LP D+IVL+N+CGRG+KDM+ VAK L   V
Sbjct:  523 NSATLTMGTPGVLHGTRTYLLQDKEGQIPETHSISAGLDYPGVGPEHAWLKDSGRAEYVAATDAQALEGLQTLAQLEGLISALEPSHAIYHGMQLAKTLPKDKIVLINMCGRGDKDMHTVAKYLGVTV 650          
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A7S0MD62_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MD62_9CRYP)

HSP 1 Score: 162 bits (410), Expect = 4.490e-49
Identity = 83/128 (64.84%), Postives = 95/128 (74.22%), Query Frame = 0
Query:    1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 122
            +SATLT GTPGV HG RTYLLQD DGQI ETHSISAGL+Y GVGPE +WLKD+GRA Y  VTD QALE +  L +TEG+I ALEPSHA      +AK +  D+ VLVN CGRG+KDM  VAK L   +
Sbjct:    1 HSATLTAGTPGVLHGTRTYLLQDKDGQIEETHSISAGLDYPGVGPEHAWLKDTGRATYVCVTDSQALEGMQALCKTEGIIPALEPSHAIYYGMQLAKSMKPDQHVLVNCCGRGDKDMITVAKALGHSI 128          
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A7R9Y8B0_9STRA (Tryptophan synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8B0_9STRA)

HSP 1 Score: 170 bits (430), Expect = 1.720e-47
Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 0
Query:    1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHAM------AKDLPSDEIVLVNLCGRGEKDMNMVAKDL 118
            NSATL++G PGV HG RTYLLQD+DGQI ETHSISAGL+Y GVGPE ++LKDSGRA+Y AVTD QALEA   L++TEG+I ALEPSHAM      A  LP D+ VL+NLCGRG+KDMN VAK L
Sbjct:  469 NSATLSMGKPGVLHGTRTYLLQDADGQIPETHSISAGLDYPGVGPEHAYLKDSGRAEYVAVTDKQALEAFQTLSRTEGIIPALEPSHAMYHAMQLAASLPKDKDVLINLCGRGDKDMNTVAKTL 592          
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A6U1N338_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N338_9STRA)

HSP 1 Score: 159 bits (402), Expect = 7.850e-47
Identity = 80/128 (62.50%), Postives = 99/128 (77.34%), Query Frame = 0
Query:    1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 122
            +SATL+ GTPGV HG RTYL+QD +GQI ETHSISAGL+Y GVGPE S+LKD GRA+Y +VTD Q LE    L+++EG+I ALEPSHA      +AK++  D+IVLVNLCGRG+KDM+ VAK    D+
Sbjct:   78 HSATLSKGTPGVLHGTRTYLIQDEEGQIPETHSISAGLDYPGVGPEHSFLKDMGRAEYVSVTDAQVLEGFQTLSRSEGIIPALEPSHAVYHAMQLAKEMSPDQIVLVNLCGRGDKDMHTVAKAYGVDL 205          
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A7S2IXB1_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2IXB1_9DINO)

HSP 1 Score: 157 bits (396), Expect = 8.780e-47
Identity = 82/124 (66.13%), Postives = 98/124 (79.03%), Query Frame = 0
Query:    1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDL 118
            +SATL+ GTPGV HG+RTYLLQ ++GQI ETHSISAGL+Y GVGP+ + LKDSGR  Y +VTD QALEA+  +++TEG+I ALEPSHA      M K+ PSD IVLVNLCGRG+KDM  VAK L
Sbjct:   29 HSATLSAGTPGVLHGSRTYLLQTAEGQITETHSISAGLDYPGVGPQHAALKDSGRVKYVSVTDGQALEAMQEVSRTEGIIPALEPSHALWYSMQMCKNKPSDHIVLVNLCGRGDKDMLSVAKAL 152          
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A7S1JTC6_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JTC6_9ALVE)

HSP 1 Score: 155 bits (392), Expect = 4.420e-46
Identity = 82/128 (64.06%), Postives = 97/128 (75.78%), Query Frame = 0
Query:    1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 122
            +SATL+ G PGV HG RTYLLQD  GQI+ETHSISAGL+Y  VGP+ + LKDSGRA+Y  VTD +AL A+   ++TEG+I ALEP+HA      MAKDLP D IVL+NLCGRG+KDM  VAK L  DV
Sbjct:   38 HSATLSGGKPGVLHGNRTYLLQDVHGQIIETHSISAGLDYPAVGPQHAALKDSGRAEYVWVTDKEALNAIQTCSRTEGIIPALEPAHAIAYVIKMAKDLPKDHIVLLNLCGRGDKDMVTVAKALGYDV 165          
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A7S1U774_9STRA (Tryptophan synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U774_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.880e-45
Identity = 85/128 (66.41%), Postives = 99/128 (77.34%), Query Frame = 0
Query:    1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHAM------AKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 122
            NSATL++G PGV HG RTYLLQD DGQI ETHSISAGL+Y GVGPE ++LKDSGRA+Y AVTD QALEA   L++TEG+I ALEPSHAM      A  LP D+ VL+NLCGRG+KDM  VA+ L   +
Sbjct:  600 NSATLSMGKPGVLHGTRTYLLQDEDGQIPETHSISAGLDYPGVGPEHAFLKDSGRAEYVAVTDKQALEAFQTLSRTEGIIPALEPSHAMYHTMQLAASLPKDKDVLINLCGRGDKDMPQVARILGAQI 727          
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A3S0KGR6_9RHOO (Pyridoxal-phosphate dependent enzyme (Fragment) n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A3S0KGR6_9RHOO)

HSP 1 Score: 154 bits (388), Expect = 2.280e-45
Identity = 76/122 (62.30%), Postives = 94/122 (77.05%), Query Frame = 0
Query:    1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHAMA------KDLPSDEIVLVNLCGRGEKDMNMVAK 116
            +SA+LT G PGV HG RTYLLQD DGQI+ETHS+SAGL+Y GVGPE +WLKD+ RA+Y  +TD +ALEA H L + EG+I ALE SHA+A        LP D+I+LVNL GRG+KDM+ VA+
Sbjct:   46 HSASLTAGRPGVLHGNRTYLLQDEDGQIIETHSVSAGLDYPGVGPEHAWLKDTARAEYVGITDAEALEAFHKLCRLEGIIPALESSHALAYAAKLAPTLPKDKILLVNLSGRGDKDMHTVAE 167          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLB1_ECTSI1.360e-5478.13Tryptophan synthase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835YTN0_9STRA5.660e-5172.66Tryptophan synthase n=1 Tax=Tribonema minus TaxID=... [more]
H6WB94_VAULI1.900e-5071.09Tryptophan synthase n=1 Tax=Vaucheria litorea TaxI... [more]
A0A7S0MD62_9CRYP4.490e-4964.84Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7R9Y8B0_9STRA1.720e-4770.16Tryptophan synthase n=1 Tax=Pinguiococcus pyrenoid... [more]
A0A6U1N338_9STRA7.850e-4762.50Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2IXB1_9DINO8.780e-4766.13Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A7S1JTC6_9ALVE4.420e-4664.06Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A7S1U774_9STRA1.880e-4566.41Tryptophan synthase n=1 Tax=Phaeomonas parva TaxID... [more]
A0A3S0KGR6_9RHOO2.280e-4562.30Pyridoxal-phosphate dependent enzyme (Fragment) n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1100coord: 1..122
e-value: 7.6E-44
score: 151.9
IPR006654Tryptophan synthase, beta chainPANTHERPTHR42882FAMILY NOT NAMEDcoord: 2..118
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 3..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9521contigS-dermatodea_contig9521:4842..6381 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9521.17544.1mRNA_S-dermatodea_contig9521.17544.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9521 4842..6381 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9521.17544.1 ID=prot_S-dermatodea_contig9521.17544.1|Name=mRNA_S-dermatodea_contig9521.17544.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=123bp
NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWL
KDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHAMAKDLPSDEIVL
VNLCGRGEKDMNMVAKDLAEDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006654Trp_synth_beta
IPR036052Trypto_synt_PLP_dependent