mRNA_S-dermatodea_contig9521.17544.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: D8LLB1_ECTSI (Tryptophan synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB1_ECTSI) HSP 1 Score: 191 bits (484), Expect = 1.360e-54 Identity = 100/128 (78.12%), Postives = 108/128 (84.38%), Query Frame = 1
Query: 1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 366
NSATLT G+PGV HG RTYLLQD DGQI ETHSISAGL+Y GVGPE SWLKDSGRA+YAAVTDVQALEAL LLA+TEGLISALEPSHA MAK + D+IVLVNLCGRG+KDM+ VAK L EDV
Sbjct: 614 NSATLTQGSPGVLHGTRTYLLQDEDGQIPETHSISAGLDYPGVGPEHSWLKDSGRAEYAAVTDVQALEALQLLARTEGLISALEPSHAVYHAMQMAKGMSPDQIVLVNLCGRGDKDMHTVAKYLGEDV 741
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A835YTN0_9STRA (Tryptophan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTN0_9STRA) HSP 1 Score: 181 bits (459), Expect = 5.660e-51 Identity = 93/128 (72.66%), Postives = 103/128 (80.47%), Query Frame = 1
Query: 1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 366
NSATLT+G PGV HG RTYLLQD DGQI ETHSISAGL+Y GVGPE +WLKDSGRADY AVTD QALE L LA+TEGLISALEPSHA +AK LP D+IVL+N+CGRG+KDM+ VAK L V
Sbjct: 632 NSATLTMGKPGVLHGTRTYLLQDKDGQIPETHSISAGLDYPGVGPEHAWLKDSGRADYVAVTDKQALEGLQTLARTEGLISALEPSHAIYHGMQLAKTLPKDKIVLINMCGRGDKDMHTVAKYLGVQV 759
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: H6WB94_VAULI (Tryptophan synthase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB94_VAULI) HSP 1 Score: 178 bits (452), Expect = 1.900e-50 Identity = 91/128 (71.09%), Postives = 102/128 (79.69%), Query Frame = 1
Query: 1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 366
NSATLT+GTPGV HG RTYLLQD +GQI ETHSISAGL+Y GVGPE +WLKDSGRA+Y A TD QALE L LAQ EGLISALEPSHA +AK LP D+IVL+N+CGRG+KDM+ VAK L V
Sbjct: 523 NSATLTMGTPGVLHGTRTYLLQDKEGQIPETHSISAGLDYPGVGPEHAWLKDSGRAEYVAATDAQALEGLQTLAQLEGLISALEPSHAIYHGMQLAKTLPKDKIVLINMCGRGDKDMHTVAKYLGVTV 650
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A7S0MD62_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MD62_9CRYP) HSP 1 Score: 162 bits (410), Expect = 4.490e-49 Identity = 83/128 (64.84%), Postives = 95/128 (74.22%), Query Frame = 1
Query: 1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 366
+SATLT GTPGV HG RTYLLQD DGQI ETHSISAGL+Y GVGPE +WLKD+GRA Y VTD QALE + L +TEG+I ALEPSHA +AK + D+ VLVN CGRG+KDM VAK L +
Sbjct: 1 HSATLTAGTPGVLHGTRTYLLQDKDGQIEETHSISAGLDYPGVGPEHAWLKDTGRATYVCVTDSQALEGMQALCKTEGIIPALEPSHAIYYGMQLAKSMKPDQHVLVNCCGRGDKDMITVAKALGHSI 128
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A7R9Y8B0_9STRA (Tryptophan synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8B0_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.720e-47 Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 1
Query: 1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHAM------AKDLPSDEIVLVNLCGRGEKDMNMVAKDL 354
NSATL++G PGV HG RTYLLQD+DGQI ETHSISAGL+Y GVGPE ++LKDSGRA+Y AVTD QALEA L++TEG+I ALEPSHAM A LP D+ VL+NLCGRG+KDMN VAK L
Sbjct: 469 NSATLSMGKPGVLHGTRTYLLQDADGQIPETHSISAGLDYPGVGPEHAYLKDSGRAEYVAVTDKQALEAFQTLSRTEGIIPALEPSHAMYHAMQLAASLPKDKDVLINLCGRGDKDMNTVAKTL 592
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A6U1N338_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N338_9STRA) HSP 1 Score: 159 bits (402), Expect = 7.850e-47 Identity = 80/128 (62.50%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 366
+SATL+ GTPGV HG RTYL+QD +GQI ETHSISAGL+Y GVGPE S+LKD GRA+Y +VTD Q LE L+++EG+I ALEPSHA +AK++ D+IVLVNLCGRG+KDM+ VAK D+
Sbjct: 78 HSATLSKGTPGVLHGTRTYLIQDEEGQIPETHSISAGLDYPGVGPEHSFLKDMGRAEYVSVTDAQVLEGFQTLSRSEGIIPALEPSHAVYHAMQLAKEMSPDQIVLVNLCGRGDKDMHTVAKAYGVDL 205
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A7S2IXB1_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2IXB1_9DINO) HSP 1 Score: 157 bits (396), Expect = 8.780e-47 Identity = 82/124 (66.13%), Postives = 98/124 (79.03%), Query Frame = 1
Query: 1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDL 354
+SATL+ GTPGV HG+RTYLLQ ++GQI ETHSISAGL+Y GVGP+ + LKDSGR Y +VTD QALEA+ +++TEG+I ALEPSHA M K+ PSD IVLVNLCGRG+KDM VAK L
Sbjct: 29 HSATLSAGTPGVLHGSRTYLLQTAEGQITETHSISAGLDYPGVGPQHAALKDSGRVKYVSVTDGQALEAMQEVSRTEGIIPALEPSHALWYSMQMCKNKPSDHIVLVNLCGRGDKDMLSVAKAL 152
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A7S1JTC6_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JTC6_9ALVE) HSP 1 Score: 155 bits (392), Expect = 4.420e-46 Identity = 82/128 (64.06%), Postives = 97/128 (75.78%), Query Frame = 1
Query: 1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHA------MAKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 366
+SATL+ G PGV HG RTYLLQD GQI+ETHSISAGL+Y VGP+ + LKDSGRA+Y VTD +AL A+ ++TEG+I ALEP+HA MAKDLP D IVL+NLCGRG+KDM VAK L DV
Sbjct: 38 HSATLSGGKPGVLHGNRTYLLQDVHGQIIETHSISAGLDYPAVGPQHAALKDSGRAEYVWVTDKEALNAIQTCSRTEGIIPALEPAHAIAYVIKMAKDLPKDHIVLLNLCGRGDKDMVTVAKALGYDV 165
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A7S1U774_9STRA (Tryptophan synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U774_9STRA) HSP 1 Score: 166 bits (419), Expect = 1.880e-45 Identity = 85/128 (66.41%), Postives = 99/128 (77.34%), Query Frame = 1
Query: 1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHAM------AKDLPSDEIVLVNLCGRGEKDMNMVAKDLAEDV 366
NSATL++G PGV HG RTYLLQD DGQI ETHSISAGL+Y GVGPE ++LKDSGRA+Y AVTD QALEA L++TEG+I ALEPSHAM A LP D+ VL+NLCGRG+KDM VA+ L +
Sbjct: 600 NSATLSMGKPGVLHGTRTYLLQDEDGQIPETHSISAGLDYPGVGPEHAFLKDSGRAEYVAVTDKQALEAFQTLSRTEGIIPALEPSHAMYHTMQLAASLPKDKDVLINLCGRGDKDMPQVARILGAQI 727
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Match: A0A3S0KGR6_9RHOO (Pyridoxal-phosphate dependent enzyme (Fragment) n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A3S0KGR6_9RHOO) HSP 1 Score: 154 bits (388), Expect = 2.280e-45 Identity = 76/122 (62.30%), Postives = 94/122 (77.05%), Query Frame = 1
Query: 1 NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLKDSGRADYAAVTDVQALEALHLLAQTEGLISALEPSHAMA------KDLPSDEIVLVNLCGRGEKDMNMVAK 348
+SA+LT G PGV HG RTYLLQD DGQI+ETHS+SAGL+Y GVGPE +WLKD+ RA+Y +TD +ALEA H L + EG+I ALE SHA+A LP D+I+LVNL GRG+KDM+ VA+
Sbjct: 46 HSASLTAGRPGVLHGNRTYLLQDEDGQIIETHSVSAGLDYPGVGPEHAWLKDTARAEYVGITDAEALEAFHKLCRLEGIIPALESSHALAYAAKLAPTLPKDKILLVNLSGRGDKDMHTVAE 167 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9521.17544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9521.17544.1 >prot_S-dermatodea_contig9521.17544.1 ID=prot_S-dermatodea_contig9521.17544.1|Name=mRNA_S-dermatodea_contig9521.17544.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=123bp NSATLTLGTPGVFHGARTYLLQDSDGQIVETHSISAGLNYAGVGPELSWLback to top mRNA from alignment at S-dermatodea_contig9521:4842..6381- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9521.17544.1 ID=mRNA_S-dermatodea_contig9521.17544.1|Name=mRNA_S-dermatodea_contig9521.17544.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=1540bp|location=Sequence derived from alignment at S-dermatodea_contig9521:4842..6381- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9521:4842..6381- >mRNA_S-dermatodea_contig9521.17544.1 ID=mRNA_S-dermatodea_contig9521.17544.1|Name=mRNA_S-dermatodea_contig9521.17544.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=738bp|location=Sequence derived from alignment at S-dermatodea_contig9521:4842..6381- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |