mRNA_S-dermatodea_contig94744.17508.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig94744.17508.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE) HSP 1 Score: 108 bits (271), Expect = 2.360e-26 Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 1
Query: 1 TPLYISARQGRLEDVRILVGAKANPLLPAYDGESLPLDAAAENGHLEVVRELVQR 165
TPLYISARQGRLEDVRILVGAK NPLLPAYDGESLPLDAAAENGHLEVVRELVQR
Sbjct: 139 TPLYISARQGRLEDVRILVGAKVNPLLPAYDGESLPLDAAAENGHLEVVRELVQR 193
BLAST of mRNA_S-dermatodea_contig94744.17508.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 5.650e-23 Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 1
Query: 1 TPLYISARQGRLEDVRILVGAKANPLLPAYDGESLPLDAAAENGHLEVVRELVQR 165
TPLY SARQGRLEDV++LVG KANPL+PAYDGESLPLDAAAENG+L VVRELVQR
Sbjct: 117 TPLYTSARQGRLEDVKVLVGTKANPLVPAYDGESLPLDAAAENGYLGVVRELVQR 171
BLAST of mRNA_S-dermatodea_contig94744.17508.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 1.280e-11 Identity = 37/63 (58.73%), Postives = 45/63 (71.43%), Query Frame = 1
Query: 1 TPLYISARQGRLEDVRIL--------VGAKANPLLPAYDGESLPLDAAAENGHLEVVRELVQR 165
TPL+++A +G + + +L VGAKANP+L AYDGESLPLD AAENG L VVREL QR
Sbjct: 105 TPLHVAAAKGFHKGMVMLIHAGVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVRELEQR 167
BLAST of mRNA_S-dermatodea_contig94744.17508.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 4.500e-8 Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 1
Query: 1 TPLYISARQGRLEDVRILVGAKANPLLPAYDGES----LPLDAAAENGHLEVVRELVQR 165
TPLY +A +G ++ R+L+ AKA+PLL S LPLDAAAENGH EVV EL+++
Sbjct: 150 TPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQ 208
BLAST of mRNA_S-dermatodea_contig94744.17508.1 vs. uniprot
Match: D7FWJ9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ9_ECTSI) HSP 1 Score: 51.6 bits (122), Expect = 2.250e-6 Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 10 YISARQGRLEDVRILVGAKANPLL-----PAYDG-ESLPLDAAAENGHLEVVRELVQR 165
YI+AR G L+ +R L+ KANPLL P+ G S PLD AA+NGH ++VRELV++
Sbjct: 79 YIAARSGPLDTLRELLRLKANPLLEFEPPPSSVGCGSAPLDIAAQNGHSDIVRELVEQ 136
BLAST of mRNA_S-dermatodea_contig94744.17508.1 vs. uniprot
Match: A0A6H5KEI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE) HSP 1 Score: 50.8 bits (120), Expect = 6.660e-6 Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 1 TPLYISARQGRLEDVRILVGAKANPLLPAYD---GES-LPLDAAAENGHLEVVRELVQ 162
TPLYI+A QG L V++L+ AKANPLL G S +PL+ AA+ G VVREL++
Sbjct: 14 TPLYIAAMQGHLGAVKVLLHAKANPLLTRSSECSGRSFVPLEVAAQTGRSAVVRELLR 71
BLAST of mRNA_S-dermatodea_contig94744.17508.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 50.4 bits (119), Expect = 9.230e-6 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 1
Query: 1 TPLYISARQGRLEDVRILVGAKANPLLPAYDGESL-PLDAAAENGHLEVVRELVQR 165
TPL+ + +G+LE R L+ A ANPL+ +L PLD+AA NG+L V+REL+QR
Sbjct: 136 TPLFRAMTEGQLEATRELLRANANPLITRAPLPTLLPLDSAARNGNLLVMRELIQR 191
BLAST of mRNA_S-dermatodea_contig94744.17508.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 50.1 bits (118), Expect = 1.270e-5 Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 1
Query: 1 TPLYISARQGRLEDVRILVGAKANPLLPAYDGES----LPLDAAAENGHLEVVRELVQR 165
TPLY +A G + V +L+ AKA+PLL LPLD AA+NGH EVV EL+++
Sbjct: 150 TPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQ 208 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig94744.17508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig94744.17508.1 >prot_S-dermatodea_contig94744.17508.1 ID=prot_S-dermatodea_contig94744.17508.1|Name=mRNA_S-dermatodea_contig94744.17508.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=55bp TPLYISARQGRLEDVRILVGAKANPLLPAYDGESLPLDAAAENGHLEVVRback to top mRNA from alignment at S-dermatodea_contig94744:376..540- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig94744.17508.1 ID=mRNA_S-dermatodea_contig94744.17508.1|Name=mRNA_S-dermatodea_contig94744.17508.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=165bp|location=Sequence derived from alignment at S-dermatodea_contig94744:376..540- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig94744:376..540- >mRNA_S-dermatodea_contig94744.17508.1 ID=mRNA_S-dermatodea_contig94744.17508.1|Name=mRNA_S-dermatodea_contig94744.17508.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=330bp|location=Sequence derived from alignment at S-dermatodea_contig94744:376..540- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |