prot_S-dermatodea_contig9474.17507.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9474.17507.1
Unique Nameprot_S-dermatodea_contig9474.17507.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length117
Homology
BLAST of mRNA_S-dermatodea_contig9474.17507.1 vs. uniprot
Match: D8LC26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC26_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 5.650e-69
Identity = 104/118 (88.14%), Postives = 111/118 (94.07%), Query Frame = 0
Query:    1 MKTLLATRFVDIPEGVEVGVKSRVVTVKGPRGELVQSFKHVNLDMQKA-EGKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITARTVEIRNFLGEKR 117
            MKTLLATR+V IPEGV + VKSRVVTV GPRGELVQSFKH+NLD+QK+ + KLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSIT +TVEIRNFLGEKR
Sbjct:    1 MKTLLATRYVTIPEGVTIDVKSRVVTVTGPRGELVQSFKHLNLDLQKSGKNKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITGKTVEIRNFLGEKR 118          
BLAST of mRNA_S-dermatodea_contig9474.17507.1 vs. uniprot
Match: A0A836CAK5_9STRA (Ribosomal protein L6, alpha-beta domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAK5_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.190e-66
Identity = 96/119 (80.67%), Postives = 113/119 (94.96%), Query Frame = 0
Query:    1 MKTLLATRFVDIPEGVEVGVKSRVVTVKGPRGELVQSFKHVNLDMQKAEG--KLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITARTVEIRNFLGEKR 117
            MKT+LATR++DIPEGV+V VKSRVV+V+GPRG L ++FKH+NLD+QKA+G  KLRVDLWFGNRKQLACIRT+CSH+EN+ITGVTKG+LYKMRFCYAHFPINV++T RTVEIRNFLGEKR
Sbjct:    1 MKTVLATRYIDIPEGVKVDVKSRVVSVEGPRGSLTRNFKHLNLDIQKADGGKKLRVDLWFGNRKQLACIRTVCSHIENLITGVTKGFLYKMRFCYAHFPINVTLTDRTVEIRNFLGEKR 119          
BLAST of mRNA_S-dermatodea_contig9474.17507.1 vs. uniprot
Match: A0A7S2XV97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV97_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.990e-59
Identity = 89/118 (75.42%), Postives = 107/118 (90.68%), Query Frame = 0
Query:    1 MKTLLATRFVDIPEGVEVGVKSRVVTVKGPRGELVQSFKHVNLDMQKA-EGKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITARTVEIRNFLGEKR 117
            MKT+LATRFV+IP+GV++ VK+R V+V+GPRG+L ++FKH +LDM+   + KLRVDLWFGNRKQLACIRTICSH+ENMITGVTKG+LYKMRF YAHFPINV++  RTVEIRNFLGEKR
Sbjct:    8 MKTILATRFVEIPDGVQLNVKARTVSVEGPRGKLERAFKHQSLDMRLVGKNKLRVDLWFGNRKQLACIRTICSHIENMITGVTKGFLYKMRFVYAHFPINVTLVDRTVEIRNFLGEKR 125          
BLAST of mRNA_S-dermatodea_contig9474.17507.1 vs. uniprot
Match: A0A8J2WY53_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY53_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.220e-53
Identity = 84/118 (71.19%), Postives = 99/118 (83.90%), Query Frame = 0
Query:    1 MKTLLATRFVDIPEGVEVGVKSRVVTVKGPRGELVQSFKHVNLDMQKAEG-KLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITARTVEIRNFLGEKR 117
            MKT+L TRF+DIP+GV V  K+R VTV GPRG+L +SFKHV LDM+     KLRVDLWFG RKQ+A IRTICSHVENM+ GVT+G+LYKMRF Y+HFPINVS+  RTVEIRNFLG+K+
Sbjct:    1 MKTILGTRFLDIPDGVTVTCKARHVTVTGPRGKLERSFKHVQLDMRMVSPQKLRVDLWFGTRKQVATIRTICSHVENMVIGVTRGFLYKMRFVYSHFPINVSLAGRTVEIRNFLGDKK 118          
BLAST of mRNA_S-dermatodea_contig9474.17507.1 vs. uniprot
Match: A0A7S2GU27_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GU27_9STRA)

HSP 1 Score: 174 bits (440), Expect = 3.390e-53
Identity = 76/118 (64.41%), Postives = 103/118 (87.29%), Query Frame = 0
Query:    1 MKTLLATRFVDIPEGVEVGVKSRVVTVKGPRGELVQSFKHVNLDMQKAEGK-LRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITARTVEIRNFLGEKR 117
            MKT+LA+R ++IPEG++V +K+R VTVKGPRGEL ++FKH+++D++K   K +RVD+WF  R+QLAC+RTICSH++NM  GVT+G+LYKMRF Y+HFPINV+++  TVEIRNFLGEKR
Sbjct:    1 MKTVLASRSIEIPEGIDVTIKARNVTVKGPRGELTRNFKHIDMDLKKVGSKFIRVDVWFATRQQLACVRTICSHIDNMFVGVTQGFLYKMRFVYSHFPINVALSGNTVEIRNFLGEKR 118          
BLAST of mRNA_S-dermatodea_contig9474.17507.1 vs. uniprot
Match: A0A7S1U0E8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U0E8_9STRA)

HSP 1 Score: 173 bits (439), Expect = 7.640e-53
Identity = 84/118 (71.19%), Postives = 96/118 (81.36%), Query Frame = 0
Query:    1 MKTLLATRFVDIPEGVEVGVKSRVVTVKGPRGELVQSFKHVNLDMQK-AEGKLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITARTVEIRNFLGEKR 117
            M+ +LATR V IPEGV V  K R VTV GPRG L + F H+N+DMQK ++ +L+VDLWFG  KQ ACIRT+CSHVENMITGVTKG+LYKMRFCYAHFPI V+I  R VEIRNFLGEKR
Sbjct:   14 MRQILATRSVAIPEGVTVEAKCRTVTVTGPRGSLTRKFGHLNVDMQKISDSELKVDLWFGTLKQRACIRTVCSHVENMITGVTKGFLYKMRFCYAHFPIIVAIEQRNVEIRNFLGEKR 131          
BLAST of mRNA_S-dermatodea_contig9474.17507.1 vs. uniprot
Match: W7TGP7_9STRA (60s ribosomal protein l9 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGP7_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.240e-52
Identity = 82/126 (65.08%), Postives = 102/126 (80.95%), Query Frame = 0
Query:    1 MKTLLATRFVDIPEGVEVGVKSRVVTVKGPRGELVQSFKHVNLDMQKAEG---------KLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITARTVEIRNFLGEKR 117
            MK +LAT+ V+IPEGV + +KSR VTVKGPRGEL ++FKH+N+  +   G         KL+VDLWF NRKQLA IRT+CSH+EN++TGVTKG+LY+MRF YAHFPINVS+T +TVE+RNFLGEKR
Sbjct:    1 MKLILATKIVNIPEGVTLHIKSRHVTVKGPRGELSRAFKHLNIAFELVGGNKDKGTNPKKLKVDLWFANRKQLATIRTVCSHIENLMTGVTKGFLYRMRFVYAHFPINVSLTDKTVEVRNFLGEKR 126          
BLAST of mRNA_S-dermatodea_contig9474.17507.1 vs. uniprot
Match: A0A7S1BA91_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BA91_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.070e-52
Identity = 79/118 (66.95%), Postives = 100/118 (84.75%), Query Frame = 0
Query:    1 MKTLLATRFVDIPEGVEVGVKSRVVTVKGPRGELVQSFKHVNLDMQKAEGK-LRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITARTVEIRNFLGEKR 117
            MKT L+++ + IP+GVEV V  RVVTVKGPRG L Q+FKHVN+D++K   K LRV+LW+  RKQLAC+RTICSH+ENM+TGVT+G++YKMRF Y+HFPINV+++   VEIRNFLGEKR
Sbjct:    2 MKTKLSSQSLAIPDGVEVDVSCRVVTVKGPRGSLTQAFKHVNMDIRKLNAKYLRVELWWATRKQLACVRTICSHIENMMTGVTRGFIYKMRFVYSHFPINVNLSGENVEIRNFLGEKR 119          
BLAST of mRNA_S-dermatodea_contig9474.17507.1 vs. uniprot
Match: A0A7R9W890_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W890_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.030e-52
Identity = 77/118 (65.25%), Postives = 99/118 (83.90%), Query Frame = 0
Query:    1 MKTLLATRFVDIPEGVEVGVKSRVVTVKGPRGELVQSFKHVNLDMQKAEGK-LRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITARTVEIRNFLGEKR 117
            MKT+LA+R ++IP+GVE  V +R VT+KGPRG L + FKH+++D++K   K +RVD+WF NRKQLAC+RTICSH+ENM  GVT+G+ YKMRF Y+HFPINVS+  +TVEIRNFLGEKR
Sbjct:    3 MKTVLASRTIEIPDGVEFEVTARKVTIKGPRGTLTREFKHIDMDLRKVGKKFVRVDIWFANRKQLACVRTICSHIENMFVGVTQGFCYKMRFVYSHFPINVSLNGKTVEIRNFLGEKR 120          
BLAST of mRNA_S-dermatodea_contig9474.17507.1 vs. uniprot
Match: B8BVQ0_THAPS (RL9, ribosomal protein 9 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVQ0_THAPS)

HSP 1 Score: 169 bits (428), Expect = 2.190e-51
Identity = 75/118 (63.56%), Postives = 97/118 (82.20%), Query Frame = 0
Query:    1 MKTLLATRFVDIPEGVEVGVKSRVVTVKGPRGELVQSFKHVNLDMQKAEGK-LRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINVSITARTVEIRNFLGEKR 117
            MKT+LA+R +DIPEGV V + +R+V V GPRG L + FKH+N+D++K   K +RVDLWF  RKQLAC+RT+CSH++NMI GVT+G++YKMRF Y+HFPINV++    VEIRNFLGEKR
Sbjct:    1 MKTVLASRTIDIPEGVTVEIAARIVKVTGPRGSLTRDFKHINMDLRKVGDKSVRVDLWFATRKQLACVRTVCSHIDNMIVGVTQGFIYKMRFVYSHFPINVTLNGNDVEIRNFLGEKR 118          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9474.17507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC26_ECTSI5.650e-6988.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAK5_9STRA2.190e-6680.67Ribosomal protein L6, alpha-beta domain-containing... [more]
A0A7S2XV97_9STRA2.990e-5975.42Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A8J2WY53_9STRA1.220e-5371.19Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2GU27_9STRA3.390e-5364.41Hypothetical protein (Fragment) n=1 Tax=Helicothec... [more]
A0A7S1U0E8_9STRA7.640e-5371.19Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
W7TGP7_9STRA1.240e-5265.0860s ribosomal protein l9 n=2 Tax=Monodopsidaceae T... [more]
A0A7S1BA91_9STRA2.070e-5266.95Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7R9W890_9STRA3.030e-5265.25Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
B8BVQ0_THAPS2.190e-5163.56RL9, ribosomal protein 9 n=1 Tax=Thalassiosira pse... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020040Ribosomal protein L6, alpha-beta domainPFAMPF00347Ribosomal_L6coord: 12..84
e-value: 2.1E-21
score: 76.3
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 85..117
e-value: 5.5E-11
score: 44.4
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 1..84
e-value: 9.1E-36
score: 123.9
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 85..116
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 1..84
NoneNo IPR availablePANTHERPTHR11655:SF1660S RIBOSOMAL PROTEIN L9-RELATEDcoord: 1..117
IPR000702Ribosomal protein L6PANTHERPTHR1165560S/50S RIBOSOMAL PROTEIN L6/L9coord: 1..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9474contigS-dermatodea_contig9474:2892..5805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9474.17507.1mRNA_S-dermatodea_contig9474.17507.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9474 2892..5805 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9474.17507.1 ID=prot_S-dermatodea_contig9474.17507.1|Name=mRNA_S-dermatodea_contig9474.17507.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=117bp
MKTLLATRFVDIPEGVEVGVKSRVVTVKGPRGELVQSFKHVNLDMQKAEG
KLRVDLWFGNRKQLACIRTICSHVENMITGVTKGYLYKMRFCYAHFPINV
SITARTVEIRNFLGEKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020040Ribosomal_L6_a/b-dom
IPR036789Ribosomal_L6_a/b-dom_sf
IPR000702Ribosomal_L6