prot_S-dermatodea_contig94669.17498.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig94669.17498.1
Unique Nameprot_S-dermatodea_contig94669.17498.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length147
Homology
BLAST of mRNA_S-dermatodea_contig94669.17498.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 1.540e-35
Identity = 62/144 (43.06%), Postives = 94/144 (65.28%), Query Frame = 0
Query:    1 LIGLDFANAFNSVRRKPMLEELQRRAPGLAPFVAKCYGGQPADVIFTMETGERRVIPSKTGVQQGDALGPALFCMPLGTVLEKTRAVYESKGVELFAYMDDVGMALRELTAQTVQAVPFLREESSGIGVILNGAKCVALPPPGH 144
            ++  D +NAFN+ +R  ++ +  +  P L  ++A+CY   PA  I+TM++GERR I  K+GVQQGD +GP LFC  L  ++ K RA Y+  GV L AY+DD+ +  + +TA+ +Q +P L +E   +G+I+N  K  ALPPPGH
Sbjct:  146 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGH 289          
BLAST of mRNA_S-dermatodea_contig94669.17498.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 4.870e-35
Identity = 63/144 (43.75%), Postives = 94/144 (65.28%), Query Frame = 0
Query:    1 LIGLDFANAFNSVRRKPMLEELQRRAPGLAPFVAKCYGGQPADVIFTMETGERRVIPSKTGVQQGDALGPALFCMPLGTVLEKTRAVYESKGVELFAYMDDVGMALRELTAQTVQAVPFLREESSGIGVILNGAKCVALPPPGH 144
            ++  D +NAFN+ +R  ++ +  +  P L  ++A+CY   PA  I+TM++GERR I  K+GVQQGD +GP LFC  L  ++ K RA Y+  GV L AYMDD+ +  +++TA+ +Q  P L +E   +G+I+N  K  ALPPPGH
Sbjct:  506 VVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGH 649          
BLAST of mRNA_S-dermatodea_contig94669.17498.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 4.960e-35
Identity = 63/144 (43.75%), Postives = 93/144 (64.58%), Query Frame = 0
Query:    1 LIGLDFANAFNSVRRKPMLEELQRRAPGLAPFVAKCYGGQPADVIFTMETGERRVIPSKTGVQQGDALGPALFCMPLGTVLEKTRAVYESKGVELFAYMDDVGMALRELTAQTVQAVPFLREESSGIGVILNGAKCVALPPPGH 144
            ++  D +NAFN+ +R  ++ +  +  P L  ++A+CY   PA  I+TM++GERR I  K+GVQQGD +GP LFC  L  ++ K RA Y+  GV L AYMDD+ +  + +TA+ +Q +P L  E   +G+I+N  K  ALPPPGH
Sbjct:  533 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGH 676          
BLAST of mRNA_S-dermatodea_contig94669.17498.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 5.450e-35
Identity = 62/144 (43.06%), Postives = 92/144 (63.89%), Query Frame = 0
Query:    1 LIGLDFANAFNSVRRKPMLEELQRRAPGLAPFVAKCYGGQPADVIFTMETGERRVIPSKTGVQQGDALGPALFCMPLGTVLEKTRAVYESKGVELFAYMDDVGMALRELTAQTVQAVPFLREESSGIGVILNGAKCVALPPPGH 144
            ++  D +NAFN+ +R  ++ +  +  P L  ++A+CY   PA  I+TM++G RR I  K GVQQGD +GP LFC  L  ++ K RA Y+  GV L AYMDD+ +  + +TA+ +Q +P L +E   +G+I+N  K  ALPPPGH
Sbjct:  229 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGH 372          
BLAST of mRNA_S-dermatodea_contig94669.17498.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.080e-34
Identity = 62/144 (43.06%), Postives = 94/144 (65.28%), Query Frame = 0
Query:    1 LIGLDFANAFNSVRRKPMLEELQRRAPGLAPFVAKCYGGQPADVIFTMETGERRVIPSKTGVQQGDALGPALFCMPLGTVLEKTRAVYESKGVELFAYMDDVGMALRELTAQTVQAVPFLREESSGIGVILNGAKCVALPPPGH 144
            ++  D +NAFN+ +R  ++ +  +  P L  ++A+CY   PA  I+TM++GERR I  K+GVQQGD +GP LFC  L  ++ K RA Y+  GV L AYMDD+ +  + +TA+ +Q +P + +E   +G+I+N  K  ALPPPGH
Sbjct:   54 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGH 197          
BLAST of mRNA_S-dermatodea_contig94669.17498.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 1.280e-34
Identity = 63/145 (43.45%), Postives = 95/145 (65.52%), Query Frame = 0
Query:    1 LIGLDFANAFNSVRRKPMLEELQRRAPGLAPFVAKCYGGQPADVIFTMETGERRVIPSKTGVQQGDALGPALFCMPLGTVLEKTRAVYESKGVELFAYMDDV-GMALRELTAQTVQAVPFLREESSGIGVILNGAKCVALPPPGH 144
            ++  D +NAFN+ +R  ++ +  +  P L  ++A+CY   PA  I+TM++GERR I  K+GVQQGD +GP LFC  L  ++ K RA Y++ GV L AYMDD+  +  + +TA+ +Q +P L +E   +G+I+N  K  ALPPPGH
Sbjct:  138 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGH 282          
BLAST of mRNA_S-dermatodea_contig94669.17498.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 2.510e-34
Identity = 61/144 (42.36%), Postives = 94/144 (65.28%), Query Frame = 0
Query:    1 LIGLDFANAFNSVRRKPMLEELQRRAPGLAPFVAKCYGGQPADVIFTMETGERRVIPSKTGVQQGDALGPALFCMPLGTVLEKTRAVYESKGVELFAYMDDVGMALRELTAQTVQAVPFLREESSGIGVILNGAKCVALPPPGH 144
            ++  D ++AFN+ +R  ++ +  +  P +  ++A+CY   PA  I+TM++GERR I  K+GVQQGD +GP LFC  L  ++ K RA+Y+  GV L AYMDD+ +    +TA+ +Q +P L +E   +G+I+N  K  ALPPPGH
Sbjct:  131 VVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLIPDLVDELEAVGIIVNRGKSSALPPPGH 274          
BLAST of mRNA_S-dermatodea_contig94669.17498.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.600e-34
Identity = 62/144 (43.06%), Postives = 93/144 (64.58%), Query Frame = 0
Query:    1 LIGLDFANAFNSVRRKPMLEELQRRAPGLAPFVAKCYGGQPADVIFTMETGERRVIPSKTGVQQGDALGPALFCMPLGTVLEKTRAVYESKGVELFAYMDDVGMALRELTAQTVQAVPFLREESSGIGVILNGAKCVALPPPGH 144
            ++  D +NAFN+ +R  ++ +  +  P L  ++A+CY   PA  I+ M++GERR I  K+GVQQGD +GP LFC  L  ++ K RA Y+  GV L AYMDD+ +  + +TA+ +Q +P L +E   +G+I+N  K  ALPPPGH
Sbjct:  507 VVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGH 650          
BLAST of mRNA_S-dermatodea_contig94669.17498.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 2.770e-33
Identity = 60/144 (41.67%), Postives = 91/144 (63.19%), Query Frame = 0
Query:    1 LIGLDFANAFNSVRRKPMLEELQRRAPGLAPFVAKCYGGQPADVIFTMETGERRVIPSKTGVQQGDALGPALFCMPLGTVLEKTRAVYESKGVELFAYMDDVGMALRELTAQTVQAVPFLREESSGIGVILNGAKCVALPPPGH 144
            ++  D +N  N+ +R  ++ +  +  P L   +A+CY   PA  I+ M++GERR I  K+GVQQGD +GP LFC  L  ++ K RA Y+  GV L AYMDD+ +  + +TA+++Q +P L +E   +G+I+N  K  ALPPPGH
Sbjct:  184 VVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCYE-LPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEAVGIIVNRGKSSALPPPGH 326          
BLAST of mRNA_S-dermatodea_contig94669.17498.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 8.490e-33
Identity = 60/144 (41.67%), Postives = 91/144 (63.19%), Query Frame = 0
Query:    1 LIGLDFANAFNSVRRKPMLEELQRRAPGLAPFVAKCYGGQPADVIFTMETGERRVIPSKTGVQQGDALGPALFCMPLGTVLEKTRAVYESKGVELFAYMDDVGMALRELTAQTVQAVPFLREESSGIGVILNGAKCVALPPPGH 144
            ++  D +NAFN+ +R  ++ +  +  P L  ++A+CY    A  I+ M++GERR I  K+GVQQGD +GP LF   L  ++ K RA Y+  GV L AYMDD+ +  + +TA+ +Q +P L +E   +G+I+N  K  ALPPPGH
Sbjct:   95 VVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGH 238          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig94669.17498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLG6_9PHAE1.540e-3543.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE4.870e-3543.75Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE4.960e-3543.75Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KR59_9PHAE5.450e-3543.06Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KYJ9_9PHAE1.080e-3443.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE1.280e-3443.45Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K0V7_9PHAE2.510e-3442.36Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE2.600e-3443.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KT19_9PHAE2.770e-3341.67Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDD0_9PHAE8.490e-3341.67Reverse transcriptase domain-containing protein n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 3..139
e-value: 5.2E-13
score: 49.0
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..147
score: 14.328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig94669contigS-dermatodea_contig94669:84..524 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig94669.17498.1mRNA_S-dermatodea_contig94669.17498.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig94669 84..524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig94669.17498.1 ID=prot_S-dermatodea_contig94669.17498.1|Name=mRNA_S-dermatodea_contig94669.17498.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=147bp
LIGLDFANAFNSVRRKPMLEELQRRAPGLAPFVAKCYGGQPADVIFTMET
GERRVIPSKTGVQQGDALGPALFCMPLGTVLEKTRAVYESKGVELFAYMD
DVGMALRELTAQTVQAVPFLREESSGIGVILNGAKCVALPPPGHVPT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom