mRNA_S-dermatodea_contig9462.17495.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9462.17495.1 vs. uniprot
Match: D7G7Z3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Z3_ECTSI) HSP 1 Score: 524 bits (1350), Expect = 1.600e-181 Identity = 268/444 (60.36%), Postives = 320/444 (72.07%), Query Frame = 1
Query: 94 MPRLALLVSGCSAFLVTGWLLVGNHEAGFAQRKPEPPKGL-----------------AQVIPTGARAIDRHDVQREALVVKGGAKKKQGMRGVQVDRTNILDKVTLEDLKAPPGRLWIPAALTGPIDNNRPE-PLSNVLVAYCQLDMDAYHEKPWTFAMGTFHQRQSGCLDDKGLVRTYRLSALMEVMEEHPEAFMDPTGFIYHETRCGSTLTANMMAAVPTNIVHSETPPPIAVLNLCGGEGKCPQEMRLKLVRTVFRLMGPVQDGHTHLFFKFQSSKFLPAVEEAWPDVKWVYLFRDPLEVIASNLKGAWRKVGLNGNRNATLPA-YNMGGPCVRGVRGPTKIPGGKQQPPSPETLLNACAKQLESLNEVALKQIVDGSPNGLAVEYRQLPEVISEFVYPEHFGMAEKNTVVEGQDFRGWMEPVTHVYSKGMATPLEGAVSK 1368
MPRLA+L+SGCS FLV W +V +A Q P L A + T + D D+ L G KK+ G RG+ VDR NI++ V ++DL+APPGRLWIPAAL+GPI+++ P+ L NVLVAYCQLDM AYHE PW FAMG FHQR SGC+DD L RTYRLS+L V+EE+P+ FMDPTGFIYHETRCGSTL+ANM+AAVP+NIVH +CP +R +LVRTVFRLMGPVQDGHT LFFKFQSSKFLPA+E+AWP+ KW+YLFRDPLEV++SNLKGAWRK + RN T PA YN+GGPCVRG +G GG ++ PSPE+L+ CAK LE+LNE+AL QIV+GSPNGLAVEYRQLPEV++E+VYP+H GMAE T E +F+ WMEPVTHVYSKGMATP EGAVSK
Sbjct: 1 MPRLAVLISGCSVFLVLSWAMVAIRQASRPQFHSSSPTVLPAAKAQKEGGVGVHKEDAAKLKTRFKTPDGKDLGDRELDRNGKPKKRMGSRGISVDRKNIVETVEMDDLRAPPGRLWIPAALSGPINHDSPDNALFNVLVAYCQLDMVAYHESPWLFAMGAFHQRTSGCMDDPSLTRTYRLSSLKRVLEENPDEFMDPTGFIYHETRCGSTLSANMIAAVPSNIVH-----------------RCPDGLREELVRTVFRLMGPVQDGHTDLFFKFQSSKFLPAIEQAWPETKWIYLFRDPLEVMSSNLKGAWRKQVASAERNMTSPAVYNLGGPCVRGAKG-----GGSRKAPSPESLVTTCAKHLETLNEIALTQIVEGSPNGLAVEYRQLPEVMTEYVYPKHLGMAE--TEEERSEFKRWMEPVTHVYSKGMATPAEGAVSK 420
BLAST of mRNA_S-dermatodea_contig9462.17495.1 vs. uniprot
Match: A0A6H5KRY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRY1_9PHAE) HSP 1 Score: 172 bits (435), Expect = 3.660e-44 Identity = 126/349 (36.10%), Postives = 179/349 (51.29%), Query Frame = 1
Query: 292 AKKKQGMRGVQVDRTNI-LDKVTLEDLKAPPGRLWIPAALTGPIDNNRPEPLSNVLVAYCQLDMDAYHEKPWTFAMGTFHQRQSGCLDDK-GLVRTYRLSALMEVMEEHPEAFMDPTGFIYHETRCGSTLTANMMAAVPTNIVHSETPPPIAVLNLCGGEGKCPQEMRLKLVRTVFRLMGPVQDGHTHLFFKFQSSKFLPAVEEAWPDVKWVYLFRDPLEVIASNLKGAWRKVGLNGNRNATLPAYNMGGPCVRGVRGPTKIPGGKQQPPSPETLLNACAKQLESLNEVALKQIVDGSPNGLAVEYRQLPEVISEFVYPEHFGMAEKNTVVEGQDFRGWMEPVTHVYSK 1332
AK + G G+ D T LD + L+D+K G LWIP ++ DN +PL V CQ++ D+Y PW MG SGC D K V+ +S L ++EE PTGFI+HETRCGSTL ANM+A+V TN++ SE+ P V++ C KC +E + +R + M H H +FKFQSS+ + AV A+PD W+++FR+P+EV+ S L GA R +G+ G RG++ + K P ET + A+ L L + A+ + G+ VEY LP I V P+H+G+ TV E + R M T +YSK
Sbjct: 166 AKPQVGEHGMLHDFTKTPLDTLDLDDVKD--GHLWIPVSVNK-FDNLETDPL----VKMCQVNYDSYSAAPWLLPMGGLLSIASGCADLKRDTVQIVHMSTLKRLLEESTVPIPPPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTCP---KCHKEQIVPWLRVIMDAMTR-SARHKHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRL-GAQR-IGMEGMEKEVAARVE------RGMKPSKILSKPKLGKPPKET---SAAQLLAGLCKKAIHAFEENPGKGMMVEYPHLPHGIVSTVLPDHYGV----TVSEAERER--MMTSTQMYSK 486
BLAST of mRNA_S-dermatodea_contig9462.17495.1 vs. uniprot
Match: A0A6H5K3E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E4_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.120e-43 Identity = 97/237 (40.93%), Postives = 134/237 (56.54%), Query Frame = 1
Query: 286 GGAKKKQGMRGVQVDRTNILDKVTLEDLKAP-PGRLWIPAALTGPIDNNRPEPLS----NVLVAYCQLDMDAYHEKPWTFAMGTFHQRQSGCLDDKGLVRTYRLSALMEVMEEHPEAFMDPTGFIYHETRCGSTLTANMMAAVPTNIVHSETPPPIAVLNLCGGEGKCPQEMRLKLVRTVFRLMGPVQDGHTHLFFKFQSSKFLPAVEEAWPDVKWVYLFRDPLEVIASNLKGAWRK 981
GG K M + N+ T+ DL+ P G LW P ++ P+ S + +C + M Y E PW + M Q++S C + L R++RLS L M EHPE F+ P GF+YHETR GSTL ANM+A VP+N+V SE + C C + ++ L+R + L+G ++GH HLFFKFQ S LP + +A+P+V WVYLFRDP+EV+ SNLKGA+ K
Sbjct: 117 GGLKAHPRMHPIGAKLPNVPISETV-DLEVPREGLLWQPTTMS-PLKCGEAADASADECEATITFCLMRMAEYQETPWKYPMAVMLQKKSECSKAENL-RSFRLSDLRTYMREHPEEFLQPNGFVYHETRTGSTLVANMLAHVPSNLVVSENNMAEDPVRRCSD---CTEMQKVALLREIMTLLGNGRNGHEHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLKGAYGK 347
BLAST of mRNA_S-dermatodea_contig9462.17495.1 vs. uniprot
Match: D7G7C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C8_ECTSI) HSP 1 Score: 163 bits (412), Expect = 4.470e-41 Identity = 89/206 (43.20%), Postives = 122/206 (59.22%), Query Frame = 1
Query: 364 DLKAP-PGRLWIPAALTGPIDNNRPEPLS----NVLVAYCQLDMDAYHEKPWTFAMGTFHQRQSGCLDDKGLVRTYRLSALMEVMEEHPEAFMDPTGFIYHETRCGSTLTANMMAAVPTNIVHSETPPPIAVLNLCGGEGKCPQEMRLKLVRTVFRLMGPVQDGHTHLFFKFQSSKFLPAVEEAWPDVKWVYLFRDPLEVIASNLK 966
DL+ P G LW P L P+ L+ + +C + M Y E PW + M Q++SGC + L R++ LS L M EHPE F+ P GF+YHETR GSTL ANM+A VP+N+V SE+ + C C + ++ L+R + L+G ++GH HLFFKFQ S LP + +A+P+V WVYLFRDP+EV+ SNLK
Sbjct: 18 DLEVPREGLLWQPT-LMSPLKCGEAADLAADECEATITFCLMRMAEYQETPWKYPMAVMLQKKSGCSKAENL-RSFHLSDLRTYMREHPEEFLQPNGFVYHETRTGSTLVANMLAHVPSNLVVSESNMAEDPVRRCS---HCTEMQKVTLLREIMTLLGNGRNGHKHLFFKFQDSTTLPLMMKAYPEVGWVYLFRDPVEVMVSNLK 218
BLAST of mRNA_S-dermatodea_contig9462.17495.1 vs. uniprot
Match: A0A836CJX0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX0_9STRA) HSP 1 Score: 156 bits (395), Expect = 2.640e-39 Identity = 97/297 (32.66%), Postives = 147/297 (49.49%), Query Frame = 1
Query: 457 VAYCQLDMDAYHEKPWTFAMGTFHQRQSGCLDDKGLVRTYRLSALMEVMEEHPEAFMDPTGFIYHETRCGSTLTANMMAAVPTNIVHSETPPPIAVLNLCGGEGKCPQEMRLKLVRTVFRLMGPVQDGHTHLFFKFQSSKFLPAVEEAWPDVKWVYLFRDPLEVIASNLKGAWRKVGLNGNRNATLPAYNMGG-----PCVRGVRGPTKIPGGKQQPPSPETLLNACAKQLESLNEVALKQIVDGSPNGLAVEYRQLPEVISEFVYPEHFGMAEKNTVVEGQDFRGWMEPVTHVYSK 1332
V++C +++ Y +PW M S C + R Y L+ LM + +PE ++ P+GFI+HETRCGSTL ANM+A +PT ++ SE+ P L L K E+R+ VR +FR + Q H FFK L +E +PD WV+LFR+PL+V+ SN++GAW K L + A+ PC+R +P G + +PE CA L+ + A+ L ++Y+ LPE ++E+++P HF T + +ME YSK
Sbjct: 73 VSFCNMNIADYQSEPWKTPMDQMLAVASNCRS-RTHTRKYSLADLMAHQQRNPERYLSPSGFIHHETRCGSTLVANMIAHIPTALMVSESLVPYKALQL-----KASGELRVSEVRALFRALCFTQHHHDRCFFKLPGGTMLSQFQEVFPDTPWVFLFREPLDVVVSNMRGAWGKKELLYSEAASGQLIEKASKKAIAPCLR-----MPLPDGVTRDDAPEM---RCAGGLDKICRDAMAAARARPDLALVLDYKNLPEAVTEYLWPVHFRQGPARTERD----LPYMEEAGRAYSK 351
BLAST of mRNA_S-dermatodea_contig9462.17495.1 vs. uniprot
Match: A0A7S3ZKE9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZKE9_9STRA) HSP 1 Score: 147 bits (372), Expect = 6.290e-36 Identity = 106/306 (34.64%), Postives = 155/306 (50.65%), Query Frame = 1
Query: 379 PGRLWIPAALTGPIDNNRPEPLSNVLVAYCQLDMDAYHEKPWTFAMGTFHQRQSGCLDDKGLVRTYRLSALMEVMEEHPEAFMDPTGFIYHETRCGSTLTANMMAAVPTNIVHSETPPPIAVLNLCGGEGKCPQEMRLKLVRTVFRLMGPVQDG-HTHLFFKFQSSKF--LPAVEEAWPDVKWVYLFRDPLEVIASNLKGAWRKVGLNGNRNATLPAYNMGGPCVRGVRGPTKIP--------GGKQQPPSPETLLNACAKQLESLNEVALKQIVDGSPN-GLAVEYRQLPEVISEFVYPEHFGMA 1260
P R W P ++ G +++ P V+ C+L D Y P M S C G R L+ L E M + + P+GF++HE+R GSTL ANM+AAVPTNIV+SE+ PP AVLN C C ++ + +++ + LMG HTHLFFKFQS+ + ++ +A+P+ W++++RDP++ + S+ K NG N GPC+R R P K SPE N CA L L AL DGS + GL V+Y +P + +V+P+HFG++
Sbjct: 105 PPRFWAPVSIAG-VEHGDPR------VSLCKLAFDTYWRDPSKTPMFRDLASASRC----GRGRAGTLNTLYEDMRKKNIKPVKPSGFVFHESRVGSTLVANMLAAVPTNIVYSESAPPPAVLNHCRS---CSKQRKTDILQKLIALMGASPTNYHTHLFFKFQSATVPNIRSLLDAFPETPWLFVYRDPVQTMMSHFK--------NGVGN---------GPCLRQRRSPPPATIKILKAESAAKASRTSPE---NYCAAHLAMLTSSALD--ADGSSDRGLLVDYASMPGALEAYVFPKHFGLS 374
BLAST of mRNA_S-dermatodea_contig9462.17495.1 vs. uniprot
Match: A0A6H5JFB5_9PHAE (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFB5_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.150e-35 Identity = 95/266 (35.71%), Postives = 141/266 (53.01%), Query Frame = 1
Query: 457 VAYCQLDMDAYHEKPWTFAMGTFHQRQSGCLDDKGLVRTYRLSALMEVMEEHPEAFMDPTGFIYHETRCGSTLTANMMAAVPTNIVHSETPPPIAVLNLCGGEGKCPQEMRLKLVRTVFRLMGPVQDGHTHLFFKFQSS--KFLPAVEEAWPDVKWVYLFRDPLEVIASNLKGAWRKVGLNGNRNATLPAYNMGGPCVRGVRGP----TKIPGGKQQPPSPETLLNACAKQLESLNEVALKQIVD----GSPNGLAVEYRQLPEVI 1224
V C LD D Y +P+ + M + SG T +S L + ++ +PE +++PTGF++H +RCGSTLTAN+M + P NIV+SE+ PP+AV++LC G C +E R+ +RTV MG H H+FFKFQSS +F+ +A+P+ WV+++RDP+ V+ S L K G+ + + P C+R + P K+ G CA L +L E AL+ + D G G AV+Y LP I
Sbjct: 96 VFMCSLDRDTYFHQPYKYPMFKDLVKLSGGCQGAQSTAT-SISKLQDEIDANPEGYLEPTGFVFHMSRCGSTLTANLMGSSPHNIVYSESKPPVAVMSLCDQVG-CTEEQRVAALRTVILAMGKTS-FHKHMFFKFQSSQTRFIHYYRKAFPNTPWVFVYRDPVPVMMSLLGF---KAGMTQRPSRSTP-------CLRSMGSPPDETAKLLGMSTSEAKKAPFERYCAAHLATLVESALESVDDAAASGGAEGHAVDYETLPNAI 348
BLAST of mRNA_S-dermatodea_contig9462.17495.1 vs. uniprot
Match: F2UI36_SALR5 (JmjC domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI36_SALR5) HSP 1 Score: 143 bits (361), Expect = 3.180e-33 Identity = 106/299 (35.45%), Postives = 153/299 (51.17%), Query Frame = 1
Query: 457 VAYCQLDMDAYHEKPWTFAMGTFHQRQSGCLDDKGLVRTYRLSALMEVMEEHPEAFMDPTGFIYHETRCGSTLTANMMAAVPTNIVHSETPPPIAVLNLCGGEGKCPQEMRLKLVRTVFRLMGPVQDGHTHLFFKFQS--SKFLPAVEEAWPDVKWVYLFRDPLEVIASNLKGAWRKVGLNGNRNATLPAYNMGGPCVRGVRGPTKIPGG--KQQPPSPETLLNACAKQLESLNEVALKQIVDGSPNGLAVEYRQLPEVISEFVYPEHFGMAEKNTVVEGQDFRGWMEPVTHVYSKGMA 1341
V C+L+++AY +P+ + M R S C KG T L+ L + E +DP GF++HE+R GSTL AN++AA P N+V SE+ PP A+ C P + +++R + R M H LFFKFQS + +P EA+P+V W++++RDP+EV+AS+ K +KV PC+R PT + + + PS E CA L +L + AL + D SPNG+AV Y LP+V+ V+P HFG +V M V YSKG A
Sbjct: 84 VELCRLNIEAYTAEPYKYPMFKDLLRVSNC---KGNTMTVTLNDLRFGIPET----LDPAGFVFHESRVGSTLIANILAADPDNLVFSESAPPPAIALHC----PAPLPEKAEMMRVLLRAMSN-SVRHKRLFFKFQSVNANAIPLYTEAFPEVPWMFVYRDPVEVMASHFK---QKVPAGAKV-----------PCLRAKNSPTPLHRRYIRSKNPSDEEF---CAAHLATLCDSALHAL-DSSPNGIAVNYHDLPDVLYTRVFPVHFGYTPTPSVKRN------MVNVAQEYSKGRA 346
BLAST of mRNA_S-dermatodea_contig9462.17495.1 vs. uniprot
Match: D7FT31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT31_ECTSI) HSP 1 Score: 134 bits (338), Expect = 1.690e-31 Identity = 101/280 (36.07%), Postives = 141/280 (50.36%), Query Frame = 1
Query: 496 KPWTFAMGTFHQRQSGCLDDKGLVRTYRLSALMEVMEEHPEAFMDPTGFIYHETRCGSTLTANMMAAVPTNIVHSETPPPIAVLNLCGGEGKCPQEMRLKLVRTVFRLMGPVQDGHTHLFFKFQSSKFLPAVEEAWPDVKWVYLFRDPLEVIASNLKGAWRKVGLNGNRNATLPAYNMGGPCVRGVRGPTKIPGG-KQQPPSPETLLNACAKQLESLNEVALKQIVDGSPNGLAVEYRQLPEVISEFVYPEHFGMAEKNTVVEGQDFRGWMEPVTHVYSK 1332
KP G H LD T L + ++EE PTGFI+HETRCGSTL ANM+A+V TN++ SE+ P V++ C KC +E + +R + M H H +FKFQSS+ + AV A+PD W+++FR+P+EV+ S L GA R +G+ G RG++ P+KIP K P ET + A+ L L + A+ G+ VEY LP I V P+H+G+ TV E + R M T +YSK
Sbjct: 102 KPQVGEHGMLHDFTKTPLD------TLDLDDVKRLLEESTVPIPPPTGFIFHETRCGSTLVANMLASVETNVMWSESTGPWKVMHTCP---KCHKEQIVPWLRVIMDAMAR-SARHDHFYFKFQSSEDIDAVTSAYPDTPWIFIFREPIEVMMSRL-GAQR-IGMEGMEKEVAARVE------RGMK-PSKIPSKPKLGKPPKET---SAAQVLAGLCKKAIHAFEANPGKGMMVEYPHLPHGILSTVLPDHYGV----TVSEAERER--MMSTTQMYSK 353
BLAST of mRNA_S-dermatodea_contig9462.17495.1 vs. uniprot
Match: A0A4D9CT70_9STRA (JmjC domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT70_9STRA) HSP 1 Score: 133 bits (335), Expect = 8.130e-30 Identity = 91/274 (33.21%), Postives = 137/274 (50.00%), Query Frame = 1
Query: 457 VAYCQLDMDAYHEKPWTFAMGTFHQRQSGCLDDKGLVRTYRLSALMEVMEEHPEAFMDPTGFIYHETRCGSTLTANMMAAVPTNIVHSETPPPIAVLNLCGGEGKCPQEMRLKLVRTVFRLMGPVQDGHTHLFFKFQSSKF--LPAVEEAWPDVKWVYLFRDPLEVIASNLKGAWRKVGLNGNRNATLPAYNMGGPCVRGVRGPTK----IPGGKQQPPSPETLLNACAKQLESLNEVALKQIVDGSPNGLAVEYRQLPEVISEFVYPEHFGMA 1260
+A CQ D+ YH P F M + G K ++ ++L+++ V +E + PTGFI+HE+R GSTL ANM+A+VPTN+V+SE P V++LC G C +E ++L+R MG H H F KF SS + + +A+P+ W Y++RDP+E+I SN + GGPC+R + K I ++ S + CA L L + AL+Q+ G AV Y L E + + P HFG++
Sbjct: 160 MALCQFDISPYHRNPEQFPMS---RDLVGAFCSKNRLK-HKLASVHAV-DERAGKQLQPTGFIFHESRVGSTLVANMLASVPTNLVYSEPSVPAHVIHLCKSAG-CSEETTVRLLRMAILAMGR-SHHHDHFFIKFSSSTVVDMDLILKAFPETPWAYIYRDPVEIIVSNFQ------------------RGRGGPCIRAKKNAPKAVQDILKTDRRGASRVSDEEYCAAHLTMLCQAALEQMELPGSKGHAVAYETLVEDVLRVLVPGHFGVS 408 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9462.17495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9462.17495.1 >prot_S-dermatodea_contig9462.17495.1 ID=prot_S-dermatodea_contig9462.17495.1|Name=mRNA_S-dermatodea_contig9462.17495.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=456bp EGSSLRARGNLSPSHQQLQACVTTTGPEGATMPRLALLVSGCSAFLVTGWback to top mRNA from alignment at S-dermatodea_contig9462:1339..6990- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9462.17495.1 ID=mRNA_S-dermatodea_contig9462.17495.1|Name=mRNA_S-dermatodea_contig9462.17495.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5652bp|location=Sequence derived from alignment at S-dermatodea_contig9462:1339..6990- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9462:1339..6990- >mRNA_S-dermatodea_contig9462.17495.1 ID=mRNA_S-dermatodea_contig9462.17495.1|Name=mRNA_S-dermatodea_contig9462.17495.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2736bp|location=Sequence derived from alignment at S-dermatodea_contig9462:1339..6990- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |