prot_S-dermatodea_contig9461.17493.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9461.17493.1
Unique Nameprot_S-dermatodea_contig9461.17493.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length184
Homology
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BLAST of mRNA_S-dermatodea_contig9461.17493.1 vs. uniprot
Match: A0A6H5LR46_9PHAE (Sec15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR46_9PHAE)

HSP 1 Score: 323 bits (828), Expect = 1.590e-102
Identity = 161/184 (87.50%), Postives = 173/184 (94.02%), Query Frame = 0 
Query:    1 MSQWLVDIRDVSYKMGGAAMRRYTKIQGASTESGAGLEGDGGGTRSQALVTHSVRFLLRLGELLGCGLSLDEDELEECVPELLRGRAKDKEEEEKALDRLSDHLHPVHRALHIFARLDMLSDFKAWYLECRRPMAEMRSMITRDIDNLDTEAFLTYLPTLANGVGGFFIVEQTLVQQVCPRSSL 184
            MSQWLVDIR+VSYKMGGAAMRRYTKIQGASTESG GLEGDGGG RSQA++THSVRFLLRLG+L+GCGL L  DELEECVPELL GR++DKE+EEKALDRLSDHLHPVHRALHIFARL ML+DFKAWYLECRRPMAEMRSMITRDIDNLDT+AFLTYLPTLANG+GGFFIVEQTL+QQV  R  L
Sbjct:  219 MSQWLVDIREVSYKMGGAAMRRYTKIQGASTESGTGLEGDGGGMRSQAMMTHSVRFLLRLGDLMGCGLRLSNDELEECVPELLLGRSEDKEKEEKALDRLSDHLHPVHRALHIFARLGMLADFKAWYLECRRPMAEMRSMITRDIDNLDTDAFLTYLPTLANGIGGFFIVEQTLLQQVDHREGL 402
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BLAST of mRNA_S-dermatodea_contig9461.17493.1 vs. uniprot
Match: A0A835YRQ1_9STRA (Exocyst complex component 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRQ1_9STRA)

HSP 1 Score: 205 bits (522), Expect = 6.230e-59
Identity = 108/190 (56.84%), Postives = 138/190 (72.63%), Query Frame = 0 
Query:    1 MSQWLVDIRDVSYKMGGAAMRRYTKIQGASTESGAGLEGDGGGT-----RSQALVTHSVRFLLRLGELLGCGLSLDEDELEECVPE-LLRGRAKDKEEEEKALDRLSDHLHPVHRALHIFARLDMLSDFKAWYLECRRPMAEMRSMITRDIDNLDTEAFLTYLPTLANGVGGFFIVEQTLVQQVCPRSSL 184
            MSQWL+DIR+ SYK+GGAAMRRY K+QG             GG      +  A +T+SVR L++L +L+GC L L++ ELEE VP+ ++ G    +  E++ LD LS+HLHPVHRALHIFARL ML DFKAWY+E RRPMAE+RSM+TRD+D+LDTE FLTYLPTL NG+ GFFIVE  L+++V  +  L
Sbjct:  117 MSQWLLDIREASYKIGGAAMRRYAKLQGEPVGGFGARSSQRGGAADVLQQRAAHLTYSVRCLVQLEDLMGCTLRLEDSELEEFVPDFMVMGDRAAEAAEDRVLDHLSEHLHPVHRALHIFARLGMLDDFKAWYVERRRPMAELRSMVTRDLDHLDTEGFLTYLPTLVNGIMGFFIVEDALLRKVDHKEGL 306
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9461.17493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LR46_9PHAE1.590e-10287.50Sec15 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835YRQ1_9STRA6.230e-5956.84Exocyst complex component 6 n=1 Tax=Tribonema minu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007225Exocyst complex component EXOC6/Sec15PANTHERPTHR12702SEC15coord: 2..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9461contigS-dermatodea_contig9461:70..7963 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9461.17493.1mRNA_S-dermatodea_contig9461.17493.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9461 67..7963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9461.17493.1 ID=prot_S-dermatodea_contig9461.17493.1|Name=mRNA_S-dermatodea_contig9461.17493.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=184bp
MSQWLVDIRDVSYKMGGAAMRRYTKIQGASTESGAGLEGDGGGTRSQALV
THSVRFLLRLGELLGCGLSLDEDELEECVPELLRGRAKDKEEEEKALDRL
SDHLHPVHRALHIFARLDMLSDFKAWYLECRRPMAEMRSMITRDIDNLDT
EAFLTYLPTLANGVGGFFIVEQTLVQQVCPRSSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007225EXOC6/Sec15