prot_S-dermatodea_contig1286.1748.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1286.1748.1
Unique Nameprot_S-dermatodea_contig1286.1748.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length202
Homology
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BLAST of mRNA_S-dermatodea_contig1286.1748.1 vs. uniprot
Match: A0A6H5K262_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K262_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 9.150e-27
Identity = 80/186 (43.01%), Postives = 97/186 (52.15%), Query Frame = 0 
Query:    5 GAFPGAVTQEFALEPAIDQLLKYEGYDFAHPILAAPLRPMVAHEVSLEAMRQAEASNQS-QDEADTAANAAEDSLAAPSSGARSPGDATRXXXXXXXXXXXXDKRTLFPLEKGTRKPSTDGAGASTGGEKVGDGKPNLATVATADDRKRGAASASKEEFPDRPPHVVPFWNRTNWIAGREDGTGAR 189
            GA  GA  QEFALEPAIDQLLKYEGY+FAHP LA PLRPMVAHEV+LE MR+AEA+  S +++A  A N A D  AA SS  R  G                  ++    ++  R                                   A +  ++   DRP H VPFWNRTNWI+GR+DGTG+R
Sbjct:  784 GAATGA--QEFALEPAIDQLLKYEGYEFAHPRLAPPLRPMVAHEVALEGMRKAEAAKLSHREDAAFAKNEASDPFAAASSATRGTGHPFTTKAGKSSGAQAASGKSTSEADENGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTKFRDSENDRPAHPVPFWNRTNWISGRKDGTGSR 967
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1286.1748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K262_9PHAE9.150e-2743.01AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1286contigS-dermatodea_contig1286:12180..14995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1286.1748.1mRNA_S-dermatodea_contig1286.1748.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1286 12180..14997 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1286.1748.1 ID=prot_S-dermatodea_contig1286.1748.1|Name=mRNA_S-dermatodea_contig1286.1748.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=202bp
YGSGGAFPGAVTQEFALEPAIDQLLKYEGYDFAHPILAAPLRPMVAHEVS
LEAMRQAEASNQSQDEADTAANAAEDSLAAPSSGARSPGDATRRSPATGG
KERPADKRTLFPLEKGTRKPSTDGAGASTGGEKVGDGKPNLATVATADDR
KRGAASASKEEFPDRPPHVVPFWNRTNWIAGREDGTGARGAGRTKDATAT
AK
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