prot_S-dermatodea_contig945.17482.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig945.17482.1
Unique Nameprot_S-dermatodea_contig945.17482.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length277
Homology
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BLAST of mRNA_S-dermatodea_contig945.17482.1 vs. uniprot
Match: A0A6H5JYT6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT6_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 7.050e-12
Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 0 
Query:   10 RSYQFCQTVGTNALESYNGNIAALCPKRSDFAGSAFARSHIGVLKRVMPGGLQQVSSEMRTLLILEPLS---EESEAVVRDKGTHNRIGR---SSAVHVTMSVEKRTRKYERSVRQT 120
            R++ FC  +GTNALES+NG++AA+  KRSDF  S   R+ + +LKR  PGG ++V   +R    L PL+   EE   V + K  H + G    SSA     S  K  RK+ RS+ QT
Sbjct:  375 RAFSFCLVIGTNALESFNGSVAAMVSKRSDFYISHVGRAQLALLKRCFPGGYREVVRRIRKACGLPPLTNRAEEETLVHQRKARHLKAGHEVWSSAAVRAGSDSKLKRKHRRSLVQT 491
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BLAST of mRNA_S-dermatodea_contig945.17482.1 vs. uniprot
Match: A0A6H5KX32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX32_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 1.550e-11
Identity = 49/117 (41.88%), Postives = 66/117 (56.41%), Query Frame = 0 
Query:   10 RSYQFCQTVGTNALESYNGNIAALCPKRSDFAGSAFARSHIGVLKRVMPGGLQQVSSEMRTLLILEPLS---EESEAVVRDKGTHNRIGR---SSAVHVTMSVEKRTRKYERSVRQT 120
            R++ FC  +GTNALES+NG++AA+  KRSDF  S   R+ + +LKR  PGG ++V   +R    L PL+   EE   V + K  H   G    SSA     S  K  RK+ RS+ QT
Sbjct:  517 RAFSFCLVIGTNALESFNGSVAAMVSKRSDFYISHVGRAQLALLKRCFPGGYREVVRRIRKACGLPPLTNRAEEETLVHQRKARHLEAGHEVWSSAAVRVGSDSKLKRKHRRSLVQT 633
[Close]
BLAST of mRNA_S-dermatodea_contig945.17482.1 vs. uniprot
Match: A0A6H5KGM5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGM5_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 3.200e-11
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 0 
Query:   10 RSYQFCQTVGTNALESYNGNIAALCPKRSDFAGSAFARSHIGVLKRVMPGGLQQVSSEMRTLLILEPLSEESE 82
            R++ FC  +GTNALES+NG++AA+  KRSDF  S   R+ + +LKR  PGG ++V   +R    L PL+  +E
Sbjct:   67 RAFSFCLVIGTNALESFNGSVAAMVSKRSDFYISHVGRAQLALLKRCFPGGYREVVRRIRKACGLPPLTNRAE 139
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig945.17482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JYT6_9PHAE7.050e-1241.88Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KX32_9PHAE1.550e-1141.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGM5_9PHAE3.200e-1145.21Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig945contigS-dermatodea_contig945:4854..5684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig945.17482.1mRNA_S-dermatodea_contig945.17482.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig945 2987..5684 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig945.17482.1 ID=prot_S-dermatodea_contig945.17482.1|Name=mRNA_S-dermatodea_contig945.17482.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=277bp
MMLGLCCISRSYQFCQTVGTNALESYNGNIAALCPKRSDFAGSAFARSHI
GVLKRVMPGGLQQVSSEMRTLLILEPLSEESEAVVRDKGTHNRIGRSSAV
HVTMSVEKRTRKYERSVRQTEMVRSAKEAVSKETHLSEGAALVAEAAAKS
KEASKNHGKAAGRKAGVYTAAGGSHQAQEADADAARMSRPKPISAARKRK
TGTAAEGGPAKKRKSGVCKACSVAGVSTEFRSSKTHQRKGGLCTEVQLAW
KAHTESVAEQEVGRRSAEGVASPRAPE
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