prot_S-dermatodea_contig94487.17477.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig94487.17477.1
Unique Nameprot_S-dermatodea_contig94487.17477.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length67
Homology
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 5.300e-37
Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
Query:    1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISDLCWAPDGRSLISASFD 67
            GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEG YPYSQVACLEGHRQLISDLCWAPDGRSL+SASFD
Sbjct:  137 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFD 203          
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A835YSR1_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR1_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 5.280e-18
Identity = 38/51 (74.51%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISD 51
            GHTAAVY   FSP  +LVAS GFDRT+RLWEG YP+SQVACL  HRQL+SD
Sbjct:   79 GHTAAVYAVAFSPCGNLVASGGFDRTVRLWEGGYPHSQVACLAEHRQLVSD 129          
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A1V9Z1V2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1V2_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 5.000e-10
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 0
Query:    1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQ--VACLEGHRQLISDLCWAPDGRSLISASFD 67
            GH  AVY  KFSP   L+AS   D  + LW+ T  ++Q  +A L  H QL+ D+ W+ D RSL+SAS+D
Sbjct:  117 GHGGAVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLASHNQLVIDMSWSNDSRSLLSASYD 185          
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV)

HSP 1 Score: 58.5 bits (140), Expect = 2.130e-8
Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    5 AVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQ--VACLEGHRQLISDLCWAPDGRSLISASFD 67
            AVY  KFSP   L+AS   D  + LW+ T  ++Q  +A L  H QLI D+ W+ D RSL+SAS+D
Sbjct:  134 AVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLTQHNQLIIDISWSNDSRSLLSASYD 198          
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A1V2LDD2_CYBFA (Protein HIR n=2 Tax=Cyberlindnera fabianii TaxID=36022 RepID=A0A1V2LDD2_CYBFA)

HSP 1 Score: 53.5 bits (127), Expect = 1.270e-6
Identity = 31/82 (37.80%), Postives = 39/82 (47.56%), Query Frame = 0
Query:    1 GHTAAVYVAKFSPR---------------DSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISDLCWAPDGRSLISASFD 67
            GH     VA FSP                 S+VA+AG D++L +W   YP   V   E   + I+DLCW PDG SL  +S D
Sbjct:  237 GHDNPCEVASFSPVLYEVESPGASKEKKISSVVATAGHDKSLAIWNNMYPRPVVVFEEFSMKTITDLCWTPDGSSLFVSSLD 318          
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A4V0HZD1_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A4V0HZD1_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 1.750e-6
Identity = 31/77 (40.26%), Postives = 42/77 (54.55%), Query Frame = 0
Query:    1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQL----------ISDLCWAPDGRSLISASFD 67
            GHT  +Y    SP   L+ASAGFD+T+RLW  T    + + L GH +           ++ + +APD RSLIS  FD
Sbjct:  889 GHTREIYALAMSPDGDLLASAGFDQTVRLWS-TEDGQERSTLWGHARRSSSGEVQPVGVTSVAFAPDRRSLISVGFD 964          
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A6A4VB37_AMPAM (WD repeat, SAM and U-box domain-containing protein 1 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VB37_AMPAM)

HSP 1 Score: 52.8 bits (125), Expect = 2.330e-6
Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 0
Query:    2 HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISDLCWAPDGRSLISASFD 67
            HT  V    FSP    +ASAG D+T+RLW+ T  ++ +  L GH + ++  C++ DGR LIS S D
Sbjct:  249 HTGVVMDVHFSPSGRQLASAGGDKTVRLWD-TESWTLLRTLHGHSRYVTCCCFSGDGRLLISGSND 313          
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: UPI0019FD8BEB (AAA-like domain-containing protein n=1 Tax=filamentous cyanobacterium LEGE 07170 TaxID=1828880 RepID=UPI0019FD8BEB)

HSP 1 Score: 52.4 bits (124), Expect = 3.260e-6
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0
Query:    1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISDLCWAPDGRSLISASFD 67
            GH   +Y    SP    +A+AG D+T+RLW+G     +   LE H   +S L ++ DG++LI+AS+D
Sbjct:  558 GHAGGIYDVAVSPSADCIATAGDDKTVRLWDGQGQLLET--LESHTSPVSALAFSQDGQALITASWD 622          
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A7S1NRB8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NRB8_9EUGL)

HSP 1 Score: 50.4 bits (119), Expect = 4.490e-6
Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 0
Query:    6 VYVAKFSPRDSLVASAGFDRTLRLWEGTY-PYSQVACLEGHRQLISDLCWAPDGRSLISASFD 67
            +Y A FSP  SL+A  G+D  + LW G       +  L GH   +S L +APDGR+L+SAS D
Sbjct:    2 IYGADFSPDGSLLALGGWDGRVSLWGGANGALCLLRTLTGHTGFVSALAFAPDGRTLLSASGD 64          
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A6G0XBW5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBW5_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 8.140e-6
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 0
Query:    1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYS--QVACLEGHRQLISDLCWAPDGRS 60
            GH  AVY  KFSP   L+AS   D  + LW+ T  ++  Q+A L  H QL+ D+ W+ D RS
Sbjct:  119 GHGGAVYTTKFSPCGRLLASGSLDCRVLLWDVTTKFNPQQLASLGQHTQLVIDVSWSNDSRS 180          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNQ7_9PHAE5.300e-3797.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSR1_9STRA5.280e-1874.51WD40-repeat-containing domain protein (Fragment) n... [more]
A0A1V9Z1V2_9STRA5.000e-1046.38Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0QW05_SAPDV2.130e-847.69Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V2LDD2_CYBFA1.270e-637.80Protein HIR n=2 Tax=Cyberlindnera fabianii TaxID=3... [more]
A0A4V0HZD1_9BACT1.750e-640.26Non-specific serine/threonine protein kinase n=1 T... [more]
A0A6A4VB37_AMPAM2.330e-642.42WD repeat, SAM and U-box domain-containing protein... [more]
UPI0019FD8BEB3.260e-638.81AAA-like domain-containing protein n=1 Tax=filamen... [more]
A0A7S1NRB8_9EUGL4.490e-644.44Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A6G0XBW5_9STRA8.140e-643.55Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 35..67
e-value: 6.7
score: 11.8
coord: 1..31
e-value: 1.3
score: 16.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 1..30
e-value: 8.7E-4
score: 20.1
coord: 39..67
e-value: 0.0082
score: 17.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 42..67
score: 10.007
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..31
score: 13.616
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..67
e-value: 1.5E-18
score: 68.9
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 1..67
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 18..32
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..67
score: 17.877
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig94487contigS-dermatodea_contig94487:94..294 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig94487.17477.1mRNA_S-dermatodea_contig94487.17477.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig94487 94..294 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig94487.17477.1 ID=prot_S-dermatodea_contig94487.17477.1|Name=mRNA_S-dermatodea_contig94487.17477.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=67bp
GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLIS
DLCWAPDGRSLISASFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf