mRNA_S-dermatodea_contig94487.17477.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE) HSP 1 Score: 139 bits (349), Expect = 5.300e-37 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1
Query: 1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISDLCWAPDGRSLISASFD 201
GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEG YPYSQVACLEGHRQLISDLCWAPDGRSL+SASFD
Sbjct: 137 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGAYPYSQVACLEGHRQLISDLCWAPDGRSLLSASFD 203
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A835YSR1_9STRA (WD40-repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR1_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 5.280e-18 Identity = 38/51 (74.51%), Postives = 42/51 (82.35%), Query Frame = 1
Query: 1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISD 153
GHTAAVY FSP +LVAS GFDRT+RLWEG YP+SQVACL HRQL+SD
Sbjct: 79 GHTAAVYAVAFSPCGNLVASGGFDRTVRLWEGGYPHSQVACLAEHRQLVSD 129
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A1V9Z1V2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1V2_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 5.000e-10 Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQ--VACLEGHRQLISDLCWAPDGRSLISASFD 201
GH AVY KFSP L+AS D + LW+ T ++Q +A L H QL+ D+ W+ D RSL+SAS+D
Sbjct: 117 GHGGAVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLASHNQLVIDMSWSNDSRSLLSASYD 185
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: T0QW05_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QW05_SAPDV) HSP 1 Score: 58.5 bits (140), Expect = 2.130e-8 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 1
Query: 13 AVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQ--VACLEGHRQLISDLCWAPDGRSLISASFD 201
AVY KFSP L+AS D + LW+ T ++Q +A L H QLI D+ W+ D RSL+SAS+D
Sbjct: 134 AVYTTKFSPCGRLLASGSLDCRVLLWDITTKFNQQQLASLTQHNQLIIDISWSNDSRSLLSASYD 198
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A1V2LDD2_CYBFA (Protein HIR n=2 Tax=Cyberlindnera fabianii TaxID=36022 RepID=A0A1V2LDD2_CYBFA) HSP 1 Score: 53.5 bits (127), Expect = 1.270e-6 Identity = 31/82 (37.80%), Postives = 39/82 (47.56%), Query Frame = 1
Query: 1 GHTAAVYVAKFSPR---------------DSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISDLCWAPDGRSLISASFD 201
GH VA FSP S+VA+AG D++L +W YP V E + I+DLCW PDG SL +S D
Sbjct: 237 GHDNPCEVASFSPVLYEVESPGASKEKKISSVVATAGHDKSLAIWNNMYPRPVVVFEEFSMKTITDLCWTPDGSSLFVSSLD 318
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A4V0HZD1_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A4V0HZD1_9BACT) HSP 1 Score: 53.1 bits (126), Expect = 1.750e-6 Identity = 31/77 (40.26%), Postives = 42/77 (54.55%), Query Frame = 1
Query: 1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQL----------ISDLCWAPDGRSLISASFD 201
GHT +Y SP L+ASAGFD+T+RLW T + + L GH + ++ + +APD RSLIS FD
Sbjct: 889 GHTREIYALAMSPDGDLLASAGFDQTVRLWS-TEDGQERSTLWGHARRSSSGEVQPVGVTSVAFAPDRRSLISVGFD 964
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A6A4VB37_AMPAM (WD repeat, SAM and U-box domain-containing protein 1 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VB37_AMPAM) HSP 1 Score: 52.8 bits (125), Expect = 2.330e-6 Identity = 28/66 (42.42%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 4 HTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISDLCWAPDGRSLISASFD 201
HT V FSP +ASAG D+T+RLW+ T ++ + L GH + ++ C++ DGR LIS S D
Sbjct: 249 HTGVVMDVHFSPSGRQLASAGGDKTVRLWD-TESWTLLRTLHGHSRYVTCCCFSGDGRLLISGSND 313
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: UPI0019FD8BEB (AAA-like domain-containing protein n=1 Tax=filamentous cyanobacterium LEGE 07170 TaxID=1828880 RepID=UPI0019FD8BEB) HSP 1 Score: 52.4 bits (124), Expect = 3.260e-6 Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISDLCWAPDGRSLISASFD 201
GH +Y SP +A+AG D+T+RLW+G + LE H +S L ++ DG++LI+AS+D
Sbjct: 558 GHAGGIYDVAVSPSADCIATAGDDKTVRLWDGQGQLLET--LESHTSPVSALAFSQDGQALITASWD 622
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A7S1NRB8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NRB8_9EUGL) HSP 1 Score: 50.4 bits (119), Expect = 4.490e-6 Identity = 28/63 (44.44%), Postives = 37/63 (58.73%), Query Frame = 1
Query: 16 VYVAKFSPRDSLVASAGFDRTLRLWEGTY-PYSQVACLEGHRQLISDLCWAPDGRSLISASFD 201
+Y A FSP SL+A G+D + LW G + L GH +S L +APDGR+L+SAS D
Sbjct: 2 IYGADFSPDGSLLALGGWDGRVSLWGGANGALCLLRTLTGHTGFVSALAFAPDGRTLLSASGD 64
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Match: A0A200Q5I6_9MAGN (WD40 repeat n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200Q5I6_9MAGN) HSP 1 Score: 51.2 bits (121), Expect = 8.160e-6 Identity = 27/67 (40.30%), Postives = 35/67 (52.24%), Query Frame = 1
Query: 1 GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISDLCWAPDGRSLISASFD 201
GH V FSP +ASA FD++++LW GT VA GH + CW+ D R L+S S D
Sbjct: 395 GHQQVVNHVSFSPDGQWIASASFDKSVKLWNGTTG-KFVATFRGHVGPVYQTCWSADSRLLLSGSKD 460 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig94487.17477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig94487.17477.1 >prot_S-dermatodea_contig94487.17477.1 ID=prot_S-dermatodea_contig94487.17477.1|Name=mRNA_S-dermatodea_contig94487.17477.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=67bp GHTAAVYVAKFSPRDSLVASAGFDRTLRLWEGTYPYSQVACLEGHRQLISback to top mRNA from alignment at S-dermatodea_contig94487:94..294+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig94487.17477.1 ID=mRNA_S-dermatodea_contig94487.17477.1|Name=mRNA_S-dermatodea_contig94487.17477.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=201bp|location=Sequence derived from alignment at S-dermatodea_contig94487:94..294+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig94487:94..294+ >mRNA_S-dermatodea_contig94487.17477.1 ID=mRNA_S-dermatodea_contig94487.17477.1|Name=mRNA_S-dermatodea_contig94487.17477.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=402bp|location=Sequence derived from alignment at S-dermatodea_contig94487:94..294+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |