prot_S-dermatodea_contig94331.17463.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig94331.17463.1
Unique Nameprot_S-dermatodea_contig94331.17463.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length45
Homology
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BLAST of mRNA_S-dermatodea_contig94331.17463.1 vs. uniprot
Match: D7FRZ6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRZ6_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 2.380e-9
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0 
Query:    1 MALMSFVGWILFVFFGGLGLVGIPIDSIR 29
            MALMSFVGWILFVFFGGLGLVGIPIDSIR
Sbjct:  138 MALMSFVGWILFVFFGGLGLVGIPIDSIR 166
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig94331.17463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRZ6_ECTSI2.380e-9100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..44
NoneNo IPR availableTMHMMTMhelixcoord: 6..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig94331contigS-dermatodea_contig94331:268..402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig94331.17463.1mRNA_S-dermatodea_contig94331.17463.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig94331 238..402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig94331.17463.1 ID=prot_S-dermatodea_contig94331.17463.1|Name=mRNA_S-dermatodea_contig94331.17463.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=45bp
MALMSFVGWILFVFFGGLGLVGIPIDSIRVRRMARRRNRCCVCG*
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