prot_S-dermatodea_contig9400.17439.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig9400.17439.1
Unique Name	prot_S-dermatodea_contig9400.17439.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	144

Homology

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BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot
Match: D7G4Z4_ECTSI (Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z4_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 5.700e-89
Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 0

Query:    1 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVETAIKQGVDAVWPGWGHASENPNLPTRLTAEGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTE 144
            MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIV+TAIKQGVDAVWPGWGHASENP LPTRLT  GIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLT+
Sbjct:   84 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTDNGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTD 227

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BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot
Match: A0A6H5L0S0_9PHAE (Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S0_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 4.840e-86
Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 0

Query:    1 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVETAIKQGVDAVWPGWGHASENPNLPTRLTAEGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTE 144
            MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIV+TAIKQGVDAVWPGWGHASENP LPTRLT  GIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLT+
Sbjct:   84 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVDTAIKQGVDAVWPGWGHASENPQLPTRLTDNGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTD 227

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BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot
Match: A0A1Z9KPD5_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A1Z9KPD5_9BACT)

HSP 1 Score: 238 bits (607), Expect = 2.900e-75
Identity = 114/144 (79.17%), Postives = 124/144 (86.11%), Query Frame = 0

Query:    1 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVETAIKQGVDAVWPGWGHASENPNLPTRLTAEGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTE 144
            MA TKAI+SMR+W Y E+GDE A+EF+ MATPEDL ANAEFIR AD  VEVPGG N NNYANV LIV+ A ++G+DAVWPGWGHASENP LPT L   GI+FIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEA LTE
Sbjct:    1 MAATKAIISMRRWAYNEIGDENAIEFLVMATPEDLKANAEFIRYADDFVEVPGGSNKNNYANVSLIVDIAEREGIDAVWPGWGHASENPKLPTALKERGIQFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAILTE 144

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BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot
Match: A0A836CCC4_9STRA (Acetyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC4_9STRA)

HSP 1 Score: 249 bits (636), Expect = 6.260e-74
Identity = 119/144 (82.64%), Postives = 129/144 (89.58%), Query Frame = 0

Query:    1 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVETAIKQGVDAVWPGWGHASENPNLPTRLTAEGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTE 144
            MA TKAILSMRQWCYLELGDEKA+EFV MATP+DL ANAEFIRL+D I EVPGG N NNYANVDLIVE A ++ VDAVWPGWGHASENP LP RL+ +GIKFIGPT+PVM+VLGDKIAANILAQTAKVPSIPWSGDGL A LT+
Sbjct:   39 MAATKAILSMRQWCYLELGDEKAIEFVVMATPDDLAANAEFIRLSDGIAEVPGGSNRNNYANVDLIVELAKRENVDAVWPGWGHASENPALPRRLSDDGIKFIGPTSPVMAVLGDKIAANILAQTAKVPSIPWSGDGLTADLTD 182

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BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot
Match: A0A813EQ02_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EQ02_POLGL)

HSP 1 Score: 232 bits (592), Expect = 7.730e-74
Identity = 115/144 (79.86%), Postives = 121/144 (84.03%), Query Frame = 0

Query:    1 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVETAIKQGVDAVWPGWGHASENPNLPTRLTAEGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTE 144
            MA TKAILSMRQW YLELG +   EFVAMAT EDL ANAEFIRLAD  +EVP GKN NNYANVDLI E A  QGVDAVWPGWGHASENP LPT+L + GI FIGPTAPVMSVLGDK+AANILAQTA VPSIPWSGDGL A+L E
Sbjct:  155 MAATKAILSMRQWAYLELGLDNVFEFVAMATREDLEANAEFIRLADTFIEVPAGKNVNNYANVDLICEIAKSQGVDAVWPGWGHASENPKLPTKLKSMGITFIGPTAPVMSVLGDKVAANILAQTAGVPSIPWSGDGLVAELNE 298

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BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot
Match: A0A7S2B655_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B655_9STRA)

HSP 1 Score: 231 bits (588), Expect = 3.720e-73
Identity = 112/135 (82.96%), Postives = 119/135 (88.15%), Query Frame = 0

Query:    1 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVETAIKQGVDAVWPGWGHASENPNLPTRLTAEGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSG 135
            MA TK+ILSMR+W Y ELGDE AV+FVAMATPEDL ANAEFI+LADA VEVP GKNSNNYANVD+IV+ A +  VDAVWPGWGHASENP LPT LT  GIKFIGPTAPVMSVLGDKIAANILAQTA VPSIPWSG
Sbjct:  121 MAATKSILSMRKWAYFELGDENAVQFVAMATPEDLKANAEFIKLADAYVEVPAGKNSNNYANVDIIVDVAKEYNVDAVWPGWGHASENPKLPTALTELGIKFIGPTAPVMSVLGDKIAANILAQTANVPSIPWSG 255

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BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot
Match: A0A7S2F2I2_9STRA (Acetyl-CoA carboxylase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2I2_9STRA)

HSP 1 Score: 244 bits (624), Expect = 2.580e-72
Identity = 118/144 (81.94%), Postives = 130/144 (90.28%), Query Frame = 0

Query:    1 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVETAIKQGVDAVWPGWGHASENPNLPTRLTAEGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTE 144
            MA TK+ILSMRQW Y+ELGDEKA+EFVAMATPEDL ANAEFI+LAD+ VEVP GKNSNNYA+VD+IV+ A+ +GVDAVWPGWGHASENP LP  L A GIKFIGPT+ VMSVLGDKIAANILAQTAKVPSIPWSGDGLEA LT+
Sbjct:   91 MAATKSILSMRQWAYMELGDEKAIEFVAMATPEDLKANAEFIKLADSFVEVPAGKNSNNYASVDVIVKIAVDKGVDAVWPGWGHASENPLLPETLLANGIKFIGPTSSVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAVLTD 234

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BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot
Match: A0A830I095_9CHLO (Acetyl-CoA carboxylase n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830I095_9CHLO)

HSP 1 Score: 244 bits (624), Expect = 2.590e-72
Identity = 118/144 (81.94%), Postives = 127/144 (88.19%), Query Frame = 0

Query:    1 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVETAIKQGVDAVWPGWGHASENPNLPTRLTAEGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTE 144
            MA TK+ILSMR+WCYL+LGD+KAVEFVAMA+PEDL ANAE+IRLAD  VEVP G N NNYANVDLIV+ A K+G DAVWPGWGHASENP LP  L A GI+FIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGL A LTE
Sbjct:   91 MAATKSILSMRRWCYLQLGDDKAVEFVAMASPEDLKANAEYIRLADDFVEVPSGSNKNNYANVDLIVDIAEKEGCDAVWPGWGHASENPKLPATLKARGIQFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLTADLTE 234

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BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot
Match: I2CQP5_NANGC (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQP5_NANGC)

HSP 1 Score: 242 bits (617), Expect = 2.260e-71
Identity = 116/143 (81.12%), Postives = 125/143 (87.41%), Query Frame = 0

Query:    1 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVETAIKQGVDAVWPGWGHASENPNLPTRLTAEGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLT 143
            MA TK+ILS+RQW Y+ELGD+KA+EFV MATPEDL ANAEFIRLAD  VEVPGG N NNYANVDLIV+ A ++GVDAVWPGWGHASENP LP  L   GIKFIGPT PVMSVLGDKIAANILAQTAKVPSIPWSGDGL A+LT
Sbjct:  132 MAATKSILSIRQWAYMELGDDKAIEFVVMATPEDLNANAEFIRLADRFVEVPGGSNKNNYANVDLIVQVAEREGVDAVWPGWGHASENPRLPNTLKEMGIKFIGPTGPVMSVLGDKIAANILAQTAKVPSIPWSGDGLTAELT 274

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BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot
Match: A0A0B4L7Y6_9STRA (Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7Y6_9STRA)

HSP 1 Score: 241 bits (616), Expect = 3.090e-71
Identity = 116/143 (81.12%), Postives = 125/143 (87.41%), Query Frame = 0

Query:    1 MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVEVPGGKNSNNYANVDLIVETAIKQGVDAVWPGWGHASENPNLPTRLTAEGIKFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLT 143
            MA TK+ILSMRQW Y+ELGD++A+EFV MATPEDL ANAEFIRLAD  VEVPGG N NNYANVDLIV+ A ++GVDAVWPGWGHASENP LP  L   GIKFIGPT PVMSVLGDKIAANILAQTAKVPSIPWSGDGL A+LT
Sbjct:  129 MAATKSILSMRQWAYMELGDDRAIEFVVMATPEDLNANAEFIRLADRFVEVPGGSNKNNYANVDLIVQMAQREGVDAVWPGWGHASENPRLPNTLKQLGIKFIGPTGPVMSVLGDKIAANILAQTAKVPSIPWSGDGLTAELT 271

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9400.17439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G4Z4_ECTSI	5.700e-89	96.53	Acetyl-CoA carboxylase, partial n=1 Tax=Ectocarpus...	[more]
A0A6H5L0S0_9PHAE	4.840e-86	96.53	Acetyl-CoA carboxylase n=1 Tax=Ectocarpus sp. CCAP...	[more]
A0A1Z9KPD5_9BACT	2.900e-75	79.17	Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R...	[more]
A0A836CCC4_9STRA	6.260e-74	82.64	Acetyl-CoA carboxylase n=1 Tax=Tribonema minus Tax...	[more]
A0A813EQ02_POLGL	7.730e-74	79.86	Hypothetical protein n=1 Tax=Polarella glacialis T...	[more]
A0A7S2B655_9STRA	3.720e-73	82.96	Hypothetical protein (Fragment) n=1 Tax=Florenciel...	[more]
A0A7S2F2I2_9STRA	2.580e-72	81.94	Acetyl-CoA carboxylase n=1 Tax=Dictyocha speculum ...	[more]
A0A830I095_9CHLO	2.590e-72	81.94	Acetyl-CoA carboxylase n=2 Tax=Pycnococcus provaso...	[more]
I2CQP5_NANGC	2.260e-71	81.12	Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis gad...	[more]
A0A0B4L7Y6_9STRA	3.090e-71	81.12	Acetyl-CoA carboxylase n=1 Tax=Nannochloropsis ocu...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005481	Biotin carboxylase-like, N-terminal domain	PFAM	PF00289	Biotin_carb_N	coord: 4..110 e-value: 8.2E-26 score: 90.7
None	No IPR available	GENE3D	3.40.50.12210		coord: 1..115 e-value: 1.1E-46 score: 160.4
None	No IPR available	GENE3D	3.90.1770.10		coord: 116..144 e-value: 1.9E-9 score: 39.0
None	No IPR available	PANTHER	PTHR45728:SF6		coord: 1..143
None	No IPR available	PANTHER	PTHR45728	FAMILY NOT NAMED	coord: 1..143
IPR011764	Biotin carboxylation domain	PROSITE	PS50979	BC	coord: 1..144 score: 23.175
IPR016185	Pre-ATP-grasp domain superfamily	SUPERFAMILY	52440	PreATP-grasp domain	coord: 2..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9400	contig	S-dermatodea_contig9400:4517..7660 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9400.17439.1	mRNA_S-dermatodea_contig9400.17439.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig9400 4516..7660 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig9400.17439.1 ID=prot_S-dermatodea_contig9400.17439.1|Name=mRNA_S-dermatodea_contig9400.17439.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=144bp
MAGTKAILSMRQWCYLELGDEKAVEFVAMATPEDLLANAEFIRLADAIVE
VPGGKNSNNYANVDLIVETAIKQGVDAVWPGWGHASENPNLPTRLTAEGI
KFIGPTAPVMSVLGDKIAANILAQTAKVPSIPWSGDGLEAKLTE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005481	BC-like_N
IPR011764	Biotin_carboxylation_dom
IPR016185	PreATP-grasp_dom_sf