prot_S-dermatodea_contig12853.1742.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12853.1742.1
Unique Nameprot_S-dermatodea_contig12853.1742.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length948
Homology
BLAST of mRNA_S-dermatodea_contig12853.1742.1 vs. uniprot
Match: D7G0X0_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X0_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 1.730e-42
Identity = 184/429 (42.89%), Postives = 211/429 (49.18%), Query Frame = 0
Query:  541 SAPVSGVLGGRAILRPPQ----SRIPVAQPRARRPMPLSPGR---GVPGMSG-GVMEGS----LEGGRQAGTLSPFVGHHPSS---HLRLPLPPAIPGSFAPPFQQLTDWDVGHEAHGEAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWVRDSGVPLGHVEYSHQDXXXXXXXXXXXXXXXXXXXXETGGPSSLVMEGGGGAXGG----FGSRLPGVDLGQGMMPPFDRIHGIGDGRDSSPGPFHGMGAEVNGGA-----------------------------GAPRGAGGAGMPSPPGSVNDVGGGARPPLSPMMAALG-ESGESPPGLPRLRTLNN----------------------ERHTDHSHGGYAPLHLQGATSSSSPLASNSLAGLHHHQMPSSS-DQPTRSSPSFDALSGTVEEG 897
            S PVSGVL GRAIL PP     SR PVAQP ARRP+P SPGR   G+PGM G G+++G     ++ GRQ G+LSPF+GH  SS   HLRLPLPPA+ G F P FQ L DWD           G XXXXXXXXXXXXXX     XXXXXXXX W  ++ VPL HV+Y HQ+                           L +EGGGG X      FG+RLPGVDLGQGMMP FDR+HGIG GR SSPGPFH MGA+V G +                              +  GAGG        ++N      R  +SP+M+ LG ESGE+PPGL RLRT                                                    S  L     H +PS     P RSSPSFDALSGT   G
Sbjct:  421 SIPVSGVLSGRAILPPPSQQSSSRGPVAQPHARRPLPPSPGRSGGGIPGMPGSGMLDGXXXXXMDVGRQGGSLSPFIGHQSSSASSHLRLPLPPAMNGPFQPSFQAL-DWDDPS--------GSXXXXXXXXXXXXXXVGVQGXXXXXXXXXWPSEAAVPLSHVDYPHQEAGDMGMGRDDGRRGGDPAD------GGLDVEGGGGPXXXXXXXFGTRLPGVDLGQGMMPHFDRMHGIGGGRGSSPGPFHSMGADVGGASXXXXXXXXXXXXXXXXXXXXXXXXXXAMHSSSSGAGGE-----IDALNXXXXXGRS-MSPLMSTLGGESGETPPGLARLRTTGGMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGLGNALQHDVPSPPRHNPERSSPSFDALSGTPAAG 828          
BLAST of mRNA_S-dermatodea_contig12853.1742.1 vs. uniprot
Match: A0A6H5KHX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX5_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 3.890e-33
Identity = 148/427 (34.66%), Postives = 173/427 (40.52%), Query Frame = 0
Query:  566 PRARRPMPLSPGR---GVPGMSGGVM------EGSLEGGRQAGTLSPFVGHHPS---SHLRLPLPPAIPGSFAPPFQQLTDWD---------------------------------VGHEAHGEAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWVRDSGVPLGHVEYSHQDXXXXXXXXXXXXXXXXXXXXETGGPSS--LVMEGGGGAXGG----FGSRLPGVDLGQGMMPPFDRIHGIGDGRDSSPGPFHGMGAEVNGGAGAPRGAGGA-------------GMPSPPGSVNDVGGGARPPLSPMMAALG-ESGESPPGLPRLRTLNNERHTDHSHGG-----------------------------YAPLHLQGATSSSSPLASNSLAGLHHHQMPSSSDQ-PTRSSPSFDALSGTVEEG 897
            P ARRP P SPGR   G+PGM GG M         ++ GRQ G+LSPF+GH  S   SHLRLPLPPA+ G F   FQ L DWD                                 +G +  G A                               GW  ++ VPL HV+Y HQ+                      GGP+   L MEG GG X      FG+RLPGVDLGQGM+P FDR+HGIG GRDSSPGPFH +GAEV   +                      G      ++N      RP +SP+M+ LG ESGE+PPGL RLRT         S GG                                              S  L     H +PS S   P RSSPSFDALSGT   G
Sbjct:  728 PHARRPFPPSPGRSGGGIPGMPGGXMMDXXXXXXXMDVGRQGGSLSPFIGHQSSASSSHLRLPLPPAMNGPFQSSFQAL-DWDDPSGSGXXXXXXXXXXXXXXXXXXXWWPSLPLEIGDDPWGAAS------------TERRGVGMQGGGSAGGDGGWPSEAAVPLSHVDYPHQEAGDMGMGRDDGRRG--------GGPAEGGLDMEGSGGPXXXXXXXFGTRLPGVDLGQGMIPHFDRMHGIGGGRDSSPGPFHSIGAEVGAASXXXXXXXXXXXXXXXXXXXXXXGAXGETDALNXXXAAGRP-MSPLMSTLGGESGETPPGLARLRTGGMS-----SEGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGLGNALQHDVPSPSQHNPERSSPSFDALSGTPAAG 1127          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12853.1742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0X0_ECTSI1.730e-4242.89EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KHX5_9PHAE3.890e-3334.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 399..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12853contigS-dermatodea_contig12853:290..5892 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12853.1742.1mRNA_S-dermatodea_contig12853.1742.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12853 290..5892 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12853.1742.1 ID=prot_S-dermatodea_contig12853.1742.1|Name=mRNA_S-dermatodea_contig12853.1742.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=948bp
QCVISNCTKLSTYGFEGFLARFCFSHKSSGMVYLKNRKRCEYYECTRQPT
YGMDGQRAKFCSSHKEDGMIDVKNCRCKHPGCTRQPNYGHEGGRAKYCSS
HKLAKMVNVVSRRCEFPACKRQPIYGFEGEKATFCPTHRLEAMSDVVNRH
CEFSGCTKTPSYGYVGERAQFCSHHHLPDMEDVKNRRCEWHECRRYPIFG
HEGERARFCSAHKTDDMVNVRNRRCEEGSCTKLPTHGFPGEKAKACQAHV
KPGMVNLKGRKSASSAHPPKREGDVSIRLGPIPMGGGGGGGARAGRSPEH
DFDAAGPLGSIPDANRSDRMGNYWGVGHGGAGGREGRGPADDGDDMYGGH
GGPMMGWGMRGGAGDGGGAGNHSPAGVLGDRKYTAPDDQAARLRRLTTEV
DLREQRQRHEQEQQEINAQQIRAMQSNLPPRSRQALNAAPLEQHLYGPDD
YHPHSQLGMPPRSQQQHFMHSGGMPSGMMTRRPPSRTSLDMRSSPHGYRD
QQHPSQSRGYSPSPNSYGLLPHMSNSHGYGPGPAGEADVASAPVSGVLGG
RAILRPPQSRIPVAQPRARRPMPLSPGRGVPGMSGGVMEGSLEGGRQAGT
LSPFVGHHPSSHLRLPLPPAIPGSFAPPFQQLTDWDVGHEAHGEAGGGGS
AGGGGGPGRGGDGGGGSGGGGGGSSGGWVRDSGVPLGHVEYSHQDGGDLG
VGGGGMGGGDNRGGVETGGPSSLVMEGGGGAGGGFGSRLPGVDLGQGMMP
PFDRIHGIGDGRDSSPGPFHGMGAEVNGGAGAPRGAGGAGMPSPPGSVND
VGGGARPPLSPMMAALGESGESPPGLPRLRTLNNERHTDHSHGGYAPLHL
QGATSSSSPLASNSLAGLHHHQMPSSSDQPTRSSPSFDALSGTVEEGAGA
VGGGRSGGSGSGGHAEDGGGVGPQSSSQEGLDPRGSGRNHHEGGVGGG
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