mRNA_S-dermatodea_contig93435.17390.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig93435.17390.1 vs. uniprot
Match: D8LFA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFA3_ECTSI) HSP 1 Score: 166 bits (419), Expect = 7.950e-46 Identity = 69/80 (86.25%), Postives = 75/80 (93.75%), Query Frame = 1
Query: 16 MQVEYANDLDISEFWSGFPLPPKNFMDGSSFDRTKPCRFQDPEYYRTCGWNLNNIPFWPGSVLRFFRTHVNGLTAPWCVL 255
++VEYANDL+IS FWSGFP+PPKNFMDGSSFDRTKPC F DPEYYRTCGWNLNN+PFWPGSVLRFFRTH+NGLTAPW L
Sbjct: 525 LEVEYANDLNISTFWSGFPMPPKNFMDGSSFDRTKPCDFDDPEYYRTCGWNLNNLPFWPGSVLRFFRTHINGLTAPWLYL 604
BLAST of mRNA_S-dermatodea_contig93435.17390.1 vs. uniprot
Match: A0A835Z4N8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N8_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 4.250e-18 Identity = 37/76 (48.68%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 22 VEYANDLDISEFWSGFPLPPKNFMDGSSFDRT-KPCRFQDPEYYRTCGWNLNNIPFWPGSVLRFFRTHVNGLTAPW 246
VEY ND+D++EFWSGFP PP M ++ + + F +YY GWNL N+PFW GSVLR+FR + G+ PW
Sbjct: 363 VEYGNDIDVNEFWSGFPAPPPQHMVAAAGEWAGRALDFAHKDYYAKSGWNLCNLPFWRGSVLRWFRHKITGVNVPW 438
BLAST of mRNA_S-dermatodea_contig93435.17390.1 vs. uniprot
Match: A0A7S3ZPX7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPX7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 5.480e-18 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 22 VEYANDLDISEFWSGFPL-PPKNFMDGSSFDRTKPCRFQDPEYYRTCGWNLNNIPFWPGSVLRFFRTHVNGLTAPWCVL 255
V+Y ND+D +E+WSGFP PP+ + + DR +P + EYY GWNLNNI WPGSVLR++ V+G+T+PW L
Sbjct: 148 VDYGNDVDAAEYWSGFPRGPPQPELCAENLDRCEPFSY---EYYARSGWNLNNIARWPGSVLRYYEEPVSGVTSPWLYL 223
BLAST of mRNA_S-dermatodea_contig93435.17390.1 vs. uniprot
Match: F0XYW6_AURAN (JmjC domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYW6_AURAN) HSP 1 Score: 85.9 bits (211), Expect = 8.700e-18 Identity = 40/81 (49.38%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 13 AMQVEYANDLDISEFWSGFPLPPKNFMDGSSFDRTKPCRFQDPEYYRTCGWNLNNIPFWPGSVLRFFRTHVNGLTAPWCVL 255
A++VEY ND+D+ EFWSGFP P + D S + + + YY GWNLNNI WPGSVLR F V G+T+PW L
Sbjct: 52 AVEVEYGNDVDVHEFWSGFPKPDGDRAD-LSVAKLEGVPYASDAYYAATGWNLNNIASWPGSVLRHFTVSVPGVTSPWLYL 131
BLAST of mRNA_S-dermatodea_contig93435.17390.1 vs. uniprot
Match: A0A329SG71_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SG71_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.870e-15 Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 1
Query: 16 MQVEYANDLDISEFWSGFPLPPKNFMDGSSFDRTKPCRFQDPEYYRTCGWNLNNIPFWPGSVLRFFRTHVNGLTAPW 246
++VEYANDLDIS+ SGF K F + +P F DPEYYR GWNLNN+P GS+LR +NG+ PW
Sbjct: 160 VEVEYANDLDISQVGSGFLRSKKRFA-SRTMKGKQPIDFADPEYYRNTGWNLNNLPDAYGSLLRHLGAAINGINVPW 235
BLAST of mRNA_S-dermatodea_contig93435.17390.1 vs. uniprot
Match: T0QVD8_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QVD8_SAPDV) HSP 1 Score: 78.2 bits (191), Expect = 5.380e-15 Identity = 35/82 (42.68%), Postives = 46/82 (56.10%), Query Frame = 1
Query: 1 ASLHAMQVEYANDLDISEFWSGFPLPPKNFMDGSSFDRTKPCRFQDPEYYRTCGWNLNNIPFWPGSVLRFFRTHVNGLTAPW 246
A A +VEYAN++ I + SGFP PP + ++ F DP YY T WNLNN+PF GS+LR+ + GL PW
Sbjct: 206 APSEATEVEYANNVSIKDLGSGFPTPPTHAKASLQAKASEDVDFADPTYYATTAWNLNNLPFAAGSLLRYVDASIEGLNVPW 287
BLAST of mRNA_S-dermatodea_contig93435.17390.1 vs. uniprot
Match: W2QF68_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QF68_PHYPN) HSP 1 Score: 77.8 bits (190), Expect = 7.390e-15 Identity = 38/77 (49.35%), Postives = 46/77 (59.74%), Query Frame = 1
Query: 16 MQVEYANDLDISEFWSGFPLPPKNFMDGSSFDRTKPCRFQDPEYYRTCGWNLNNIPFWPGSVLRFFRTHVNGLTAPW 246
++VEYANDLDIS+ SGF K F S + F DPEYYR GWNLNN+P GS+LR +NG+ PW
Sbjct: 232 VEVEYANDLDISQVGSGFLRSKKRFA-SQSMKGKESIDFSDPEYYRNTGWNLNNLPDAYGSLLRHLGAAINGINVPW 307
BLAST of mRNA_S-dermatodea_contig93435.17390.1 vs. uniprot
Match: W7UAB4_9STRA (Lysine-specific demethylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UAB4_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 7.450e-15 Identity = 40/99 (40.40%), Postives = 51/99 (51.52%), Query Frame = 1
Query: 1 ASLHAMQVEYANDLDISEFWSGFPLPPKNFM---DGSSFDRT-----------KPCRFQDPEYYRTCGWNLNNIPFWPGSVLRFFRTHVNGLTAPWCVL 255
A+ + VEY NDLD + SGFP M +GS+ DR + PEYY CGWN+NN+P WPGSVLR+ R + G+ PW L
Sbjct: 313 AAEEVVDVEYGNDLDTLTYGSGFPRATDLMMPRSEGSTEDRFAIETIGKDREGRGRLLGTPEYYERCGWNMNNLPLWPGSVLRYIRAPLKGVNVPWLYL 411
BLAST of mRNA_S-dermatodea_contig93435.17390.1 vs. uniprot
Match: D0MS65_PHYIT (Histone demethylase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MS65_PHYIT) HSP 1 Score: 75.5 bits (184), Expect = 4.790e-14 Identity = 37/78 (47.44%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 13 AMQVEYANDLDISEFWSGFPLPPKNFMDGSSFDRTKPCRFQDPEYYRTCGWNLNNIPFWPGSVLRFFRTHVNGLTAPW 246
++QVEYANDLDIS+ SGF K + ++ + F DPEYYR GWNLNN+P GS+LR +NG+ PW
Sbjct: 226 SVQVEYANDLDISQVGSGFLRSKKRYASQATKGE-EAIDFADPEYYRNTGWNLNNLPDAYGSLLRHLGAAINGVNVPW 302
BLAST of mRNA_S-dermatodea_contig93435.17390.1 vs. uniprot
Match: A0A8K1CC57_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CC57_PYTOL) HSP 1 Score: 74.3 bits (181), Expect = 1.230e-13 Identity = 36/78 (46.15%), Postives = 46/78 (58.97%), Query Frame = 1
Query: 13 AMQVEYANDLDISEFWSGFPLPPKNFMDGSSFDRTKPCRFQDPEYYRTCGWNLNNIPFWPGSVLRFFRTHVNGLTAPW 246
A+QVEYANDLD ++ SGFP F + + F DP+YY WNLNN+PF GS+LR T +NG+ PW
Sbjct: 244 AVQVEYANDLDTTQVGSGFPRATNPFAAVAKGKES--VDFFDPKYYEHTAWNLNNLPFAHGSLLRHMHTAINGINVPW 319 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig93435.17390.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig93435.17390.1 >prot_S-dermatodea_contig93435.17390.1 ID=prot_S-dermatodea_contig93435.17390.1|Name=mRNA_S-dermatodea_contig93435.17390.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=80bp MQVEYANDLDISEFWSGFPLPPKNFMDGSSFDRTKPCRFQDPEYYRTCGWback to top mRNA from alignment at S-dermatodea_contig93435:119..373- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig93435.17390.1 ID=mRNA_S-dermatodea_contig93435.17390.1|Name=mRNA_S-dermatodea_contig93435.17390.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=255bp|location=Sequence derived from alignment at S-dermatodea_contig93435:119..373- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig93435:119..373- >mRNA_S-dermatodea_contig93435.17390.1 ID=mRNA_S-dermatodea_contig93435.17390.1|Name=mRNA_S-dermatodea_contig93435.17390.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at S-dermatodea_contig93435:119..373- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |