prot_S-dermatodea_contig9282.17348.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9282.17348.1
Unique Nameprot_S-dermatodea_contig9282.17348.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length158
Homology
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BLAST of mRNA_S-dermatodea_contig9282.17348.1 vs. uniprot
Match: D8LLQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLQ7_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 7.840e-14
Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = 0 
Query:    1 MMDAFDRETAELLGWKHPFWSFSVMSALLLVAYHDLVRYAIPLALLSNVAYIFATK-RASMDNHRSALRRGFSR 73
            + D  ++ T +LL WK+P  S SVM+ LLLVAYHDLVRYAIPLALL+NVAYI+A + +     H SA+  G+SR
Sbjct:   37 VFDGLEKTTEDLLQWKNPVQSLSVMTGLLLVAYHDLVRYAIPLALLANVAYIYAQEEKKGTAVHASAV--GWSR 108
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BLAST of mRNA_S-dermatodea_contig9282.17348.1 vs. uniprot
Match: A0A6H5L705_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L705_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 3.190e-13
Identity = 63/141 (44.68%), Postives = 75/141 (53.19%), Query Frame = 0 
Query:    1 MMDAFDRETAELLGWKHPFWSFSVMSALLLVAYHDLVRYAIPLALLSNVAYIFATKRASMDNHRSALRRG--FSRSPTGRAT--GDGGQ---HVRRSSSSGLTLQR----HRSRSTSPDP----RRPAASSSTATQGGAMA 126
            + D  ++ T +LL WK+P  S SVM+ LLLVAYHDLVRYAIPLALL+NVAYI+     + D       +   F  +P  R    GDG Q   H RR SS G          RSR  SP P    +RPA S S A   G  A
Sbjct:  162 VFDGLEKATKDLLQWKNPMQSLSVMTGLLLVAYHDLVRYAIPLALLANVAYIYGVGCITTDGXXXXXXQADLFGNAPRKRPAVEGDGQQLQQHTRRRSSGGRLGAEGDGSRRSRPPSPVPGSRLQRPAPSPSAAVTAGGTA 302
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9282.17348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLQ7_ECTSI7.840e-1456.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L705_9PHAE3.190e-1344.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..158
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..35
NoneNo IPR availableTMHMMTMhelixcoord: 36..55
NoneNo IPR availableTMHMMTMhelixcoord: 13..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9282contigS-dermatodea_contig9282:4861..7610 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9282.17348.1mRNA_S-dermatodea_contig9282.17348.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9282 4861..7630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9282.17348.1 ID=prot_S-dermatodea_contig9282.17348.1|Name=mRNA_S-dermatodea_contig9282.17348.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=158bp
MMDAFDRETAELLGWKHPFWSFSVMSALLLVAYHDLVRYAIPLALLSNVA
YIFATKRASMDNHRSALRRGFSRSPTGRATGDGGQHVRRSSSSGLTLQRH
RSRSTSPDPRRPAASSSTATQGGAMASKAPVTAPAERSFLARRSTAKQPK
GSSTMGKR
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