mRNA_S-dermatodea_contig928.17343.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig928.17343.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 548 bits (1411), Expect = 1.990e-180 Identity = 301/513 (58.67%), Postives = 353/513 (68.81%), Query Frame = 1
Query: 202 FRMVGYKSEKILALACLLALASQAAAE-----NDPISEPECDDGKTVSIRYSATSARLYLEAAIDGE-RGGCVTLSQIFTARGGKAPLYAIDPDTDERSTTETGTWLLTESLYVEDGITLNVHGGDEG-NADELRLQSSDDGFINLRGHGGSLSFHSTKVFAWDEDTKEVHDPSDYEEGRSYISVISEILQD-GQTCDGKAKSEMGEARMDIVSSDMGYLGYKGSEAYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMRENIQYGFDPHDDSDYLNIHDNEVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MLESFGAVVSENTFTGNKYGVRMSVGCANNEITDNKITDSTKYNAYTYKGSDAPDVVDSGYSNTNTYSSNTITGGLETIKLKESVGMVFTDNTF----VDATTIRFDDSTEVLMAGNTGLDS--VTLKVANDACFASGSDAEFVPTC 1692
FR S LAL LLA + AAA NDPIS+P+CD VSIRY+ T+ RLYLE+A DGE RGGC TL QI+ +R GKAPLYA+DPD+ + S TETGTWLLTE LYVEDGITL V+G DEG +ADELRL S+ + +INLR HGGSL F TKVF+WD T + D +GRSYIS +SEI+ D +TC+G AK+ MGEARMDI +S++GYLG++ SE+YGLTWKVRGFCKDKSNPEIFDDVNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKM +N YGFDPHDDSD+L IHDNEVY NG HGIIASKRCN VS MLESF A VSENTF NKYGVRMSVGCA+N ++N I++++KYNAYTY GSD PDVV SG S N +S N+ +G ETIK+KE+ G F DN F D +RFDD+ +M GNTGLD LKV ND+CF SD+ + P C
Sbjct: 3 FRRKSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESA-DGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDE--DETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512
BLAST of mRNA_S-dermatodea_contig928.17343.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE) HSP 1 Score: 528 bits (1359), Expect = 6.910e-173 Identity = 299/494 (60.53%), Postives = 352/494 (71.26%), Query Frame = 1
Query: 220 KSEKILALACLLALASQAAAENDPISEPECDDGKTVSIRYSATSARLYLEAAIDGERGGCVTLSQIFTARGGKAPLYAIDPDTDERSTTETGTWLLTESLYVEDGITLNVHGGDEG-NADELRLQSSDDGFINLRGHGGSLSFHSTKVFAWDEDTKEVHDPS-DYEEGRSYISVISEIL-QDGQTCDGKAKSEMGEARMDIVSSDMGYLGYKGSEAYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMRENIQYGFDPHDDSDYLNIHDNEVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MLESFGAVVSENTFTGNKYGVRMSVGCANNEITDNKITDSTKYNAYTYKGSDAPDVVDSGYSNTNTYSSNTITGGLETIKLKESVGMVFTDNTFVDATTIRFDDSTEVLMAGNTGLDSVTLKVANDACFASGSDAEFVP 1686
KS + LA LA + N+PI +PECD+ VSIRYS+ RLYLE+A RGGCVTL QI+ + G+APLYA+D + + S + TGTWLLTE L+VEDGITL VHG G +ADELRL S+ D FINLR HGGSL F STKVFAWD ++ P D E+GRSY+S +SE++ D QTC+G+AK+ MGEARMDI S+MGYLGY GSE+YGLTWKVRGFC DKSN ++F+DVNVYGNIYDSDIHHN FGVYTYGHQQGDWRRNKM +N YGFDPHDDSD+L IHDNEVY NG HGIIASKRCN VS XXXXXXXXXXXXXXXX M+ESF A VS+N F NKYG+R SVG N +N I+ ST+Y+ Y+Y GSDAPDVVDSG S N + N I GG+E+IKL ++ G F DNTF DATTIRF+D+ + LM+GN GL+ LKV N A F + SD F P
Sbjct: 7 KSALVGILALKLAAGKDTKSPNEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTS---INGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSKLKVVNGASFDASSDYGFEP 497
BLAST of mRNA_S-dermatodea_contig928.17343.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 521 bits (1342), Expect = 3.160e-170 Identity = 278/467 (59.53%), Postives = 329/467 (70.45%), Query Frame = 1
Query: 325 VSIRYSATSARLYLEAAIDGE-RGGCVTLSQIFTARGGKAPLYAIDPDTDERSTTETGTWLLTESLYVEDGITLNVHGGDEG-NADELRLQSSDDGFINLRGHGGSLSFHSTKVFAWDEDTKEVHDPSDYEEGRSYISVISEILQD-GQTCDGKAKSEMGEARMDIVSSDMGYLGYKGSEAYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMRENIQYGFDPHDDSDYLNIHDNEVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MLESFGAVVSENTFTGNKYGVRMSVGCANNEITDNKITDSTKYNAYTYKGSDAPDVVDSGYSNTNTYSSNTITGGLETIKLKESVGMVFTDNTF----VDATTIRFDDSTEVLMAGNTGLDS--VTLKVANDACFASGSDAEFVPTC 1692
VSIRY+ T+ARLYLE+A +G RGGCVTL QI+ +R GK PLYA+DPD+ ST+ TGTWLLTE LYVEDGITL V+G + G +ADELRL S+++ FINLR HGGSL F STKVF+WD T + D +GRSYIS ISEI+ D +TC+G AK+ MGEARMDI SS++GYLGY SE+YGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKM +N YGFDPHDDSD+L IHDNEVY NG HGIIASKRCN VS MLESF A VSENTF NKYGVR SVGCA+N ++N I+++ +YNAY+Y G+D PDVV SG S N +S N+ +G ETIK+KE+ G F DN F D +RFD++TE LM GNTGLD LKV NDACF +D+ + P C
Sbjct: 44 VSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDE--DETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508
BLAST of mRNA_S-dermatodea_contig928.17343.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA) HSP 1 Score: 512 bits (1318), Expect = 8.470e-167 Identity = 284/488 (58.20%), Postives = 328/488 (67.21%), Query Frame = 1
Query: 241 LACLLALASQAAAENDPISEPECDDGKTVSIRYSATSARLYLEAAIDGERGGCVTLSQIFTARGGKAPLYAIDPDTDERSTTETGTWLLTESLYVEDGITLNVHGGDEGN-ADELRLQSSDDGFINLRGHGGSLSFHSTKVFAWDEDTKEVHDPSDYEEGRSYISVISEILQDG-QTCDGKAKSEMGEARMDIVSSDMGYLGYKGSEAYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMRENIQYGFDPHDDSDYLNIHDNEVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM--LESFGAVVSENTFTGNKYGVRMSVGCANNEITDNKITDSTKYNAYTYKGSDAPDVVDSGYSNTNTYSSNTITGGLETIKLKESVGMVFTDNTFVDATTIRFDDSTEVLMAGNTGLDSVTLKVANDACFASGSDAEFVPTC 1692
LA A A+ A+ N I++P C VSIRYS TS RLYLE+A RGGCVTL I+ G APLYA+ P + + S++ TGTWLLTESLYVEDGITL VHG G ADELRL S+ FINLR HGGSL F STKVFAWD +V +D +GRSYIS +SE++ D Q CDG+AK MGEARMDI S+M YLGY GSE+YGLTWKVRG C+D SN E+FD VNVYGNIYDSDIHHNYFGVYTYGH+QGDWRRNKM N +YGFDPHDDSD+L IHDNEVY NGNHGIIASKRCN XXXXXXXX M +E+F A VS N F NKYG+RMSVGCA+N + N IT S+KYN YTY+GSDAP VVDSG S +GG ET+KL + G F DNTF A TIRF+D LM+GN+GL +LKV + +CF SD+ + P C
Sbjct: 14 LAARGADAANTASRNKAIAKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVR--TDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSDSAYKPVC 499
BLAST of mRNA_S-dermatodea_contig928.17343.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE) HSP 1 Score: 509 bits (1310), Expect = 5.320e-166 Identity = 270/467 (57.82%), Postives = 319/467 (68.31%), Query Frame = 1
Query: 298 EPECDDGKTVSIRYSATSARLYLEAAIDGERGGCVTLSQIFTARGGKAPLYAIDPDTDERSTTETGTWLLTESLYVEDGITLNVHG-GDEGNADELRLQSSDDGFINLRGHGGSLSFHSTKVFAWDEDTKEVHDPSDYEEGRSYISVISEILQDG-QTCDGKAKSEMGEARMDIVSSDMGYLGYKGSEAYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMRENIQYGFDPHDDSDYLNIHDNEVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MLESFGAVVSENTFTGNKYGVRMSVGCANNEITDNKITDSTKYNAYTYKGSDAPDVVDSGYSNTNTYSSNTITGGLETIKLKESVGMVFTDNTFVDATTIRFDDSTEVLMAGNTGLDSVTLKVANDACFASGSDAEFVP 1686
+P+CD VS+RY+A SARLY+E+A RGGCVTL QI+ + +PLYA+DP + + S + TGTWLLTE +YVEDGITL VHG G+ADELRL S+ D FI+LR +GGSL F STKVFAWD T + D +GRSYIS +SE++ D QTC+G+AK+ MGEARMDI +S+M YLGY G+E YGLTWKVRGFC DK NPE+FDDVNVYGNIYDSDIHHN FGVYTYGHQQGDWRRNKM +N YGFDPHDDSD+L IHDNEV+ NG HGIIASKRCN VS MLESF A VS+NTF NKYGVR+SVGC N + N IT S ++N ++Y G+D P+VVDSG S N + N I GG+E+I LKE+ G F DNTF DA IRF D+T+ LM+GNTGL TLKV A F SD F P
Sbjct: 7 KPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWD--TSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLADSTLKVDRGATFDESSDHGFEP 471
BLAST of mRNA_S-dermatodea_contig928.17343.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 498 bits (1281), Expect = 2.870e-161 Identity = 283/488 (57.99%), Postives = 332/488 (68.03%), Query Frame = 1
Query: 241 LACLLALASQAAAENDPISEPECDDGKTVSIRYSATSARLYLEAAIDGERGGCVTLSQIFTARGGKAPLYAIDPDTDERSTTETGTWLLTESLYVEDGITLNVHGGDEG-NADELRLQSSDDGFINLRGHGGSLSFHSTKVFAWDEDTKEVHDPSDYEEGRSYISVISEILQDG-QTCDGKAKSEMGEARMDIVSSDMGYLGYKGSEAYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMRENIQYGFDPHDDSDYLNIHDNEVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM--LESFGAVVSENTFTGNKYGVRMSVGCANNEITDNKITDSTKYNAYTYKGSDAPDVVDSGYSNTNTYSSNTITGGLETIKLKESVGMVFTDNTFVDATTIRFDDSTEVLMAGNTGLDSVTLKVANDACFASGSDAEFVPTC 1692
LA A A+ +++N IS+P C VSIRYSA+S RLYLE+A RGGCVTL +I+ G APLYA+ P + + S++ TGTWLLTE LYVEDGITL VHG G NA+ELRL S+ FINLR HGGSL F STKVFAWD +V +D + RSYIS +SEI+ D + CDGKAK MGEARMDI S+M YLGY+GSE+YGLTWKVRGFCKD SNPE+FD+VNVYGNIYDSDIHHN+FGVYTYGH+QGDWRRNKM N +YGFDPHDDSD+L IHDN+V XXXXXXXX XXXX M +ESF A VS N F NKYGVR+SVGCA+N + N I+DS+KYN YTY+GSD P VVDSG S N +S NTITGG E+IKL + G F DNTF A T RF+D+ LM+GNTGL S TLKV+ ACF SD+++ P C
Sbjct: 17 LAARGADAANTSSKNKAISKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVR--TDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 502
BLAST of mRNA_S-dermatodea_contig928.17343.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI) HSP 1 Score: 481 bits (1237), Expect = 1.870e-153 Identity = 262/484 (54.13%), Postives = 323/484 (66.74%), Query Frame = 1
Query: 283 NDPISEPECDDGKTVSIRYSATSARLYLEAAIDGERGGCVTLSQIFTARGG------KAPLYAIDPDTDERSTTETGTWLLTESLYVEDGITLNVHG-GDEGNADELRLQSS---DDG----FINLRGHGGSLSFHSTKVFAWDEDTKEVHDPSDYEEGRSYISVISEILQDG-QTCDGKAKSEMGEARMDIVSSDMGYLGYKGSEAYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMRENIQYGFDPHDDSDYLNIHDNEVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM--LESFGAVVSENTFTGNKYGVRMSVGCANNEITDNKITDSTKYNAYTYKGSDAPDVVDSGYSNTNTYSSNTITGGLETIKLKESVGMVFTDNTFVDATTIRFDDSTEVLMAGNTGLDSVT-LKVANDACFASGSDAEF 1680
N PI +PEC+ + VSIRYSAT+ RLYLEA ++GERGGCVT+ QI+ ARGG KAPLYA+DP + E S TGTWLL E LYVEDGITL V G G G ADELRL+S+ +DG +INLR HGGSL F TKVF WD T +D D +GRSYIS +SEI+ D QTC+G AK+ MGEARMDIV+S+MGY+G+ SE+YGLTWKVRGFCKDKSNPE+FD VNVYGNIYDS++HH F VYTYGHQQGDWRRN + N YG+DPHDDSD+L IHDN VY N HGIIASKRCN+VS M LES A +S N F GNKYG+RMSVGC +N +++N +T++++Y YTY+GSD +V +G S N + SNT+ GG + IKLKES G T+N F + + F ++TE ++ GN GL+ T +++ ACFA +A
Sbjct: 107 NTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDT-TNNSYD-MDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACFAETDEASL 588
BLAST of mRNA_S-dermatodea_contig928.17343.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 1.350e-135 Identity = 223/362 (61.60%), Postives = 262/362 (72.38%), Query Frame = 1
Query: 325 VSIRYSATSARLYLEAAIDGE-RGGCVTLSQIFTARGGKAPLYAIDPDTDERSTTETGTWLLTESLYVEDGITLNVHGGDEG-NADELRLQSSDDGFINLRGHGGSLSFHSTKVFAWDEDTKEVHDPSDYEEGRSYISVISEILQD-GQTCDGKAKSEMGEARMDIVSSDMGYLGYKGSEAYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMRENIQYGFDPHDDSDYLNIHDNEVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MLESFGAVVSENTFTGNKYGVRMSVGCANNEITDNKITDSTK 1395
VSIRY+ ++ARLYLE+A +G RGGCVTL QI+ +R GK PLYA+DPD+ ST+ TGTWLLTE LYVEDGITL V+G + G +ADELRL S+++ FINLR HGGSL F STKVF+WD T + D +GRSYIS ISEI+ D +TC+G AK+ MGEARMDI SS++GYLGY SE+YGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKM +N YGFDPHDDSD+L IHDNEVY NG HGIIASKRCN VS MLESF A VSENTF NKYGVR SVGCA+N ++N I+++ +
Sbjct: 44 VSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDE--DETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403
BLAST of mRNA_S-dermatodea_contig928.17343.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE) HSP 1 Score: 400 bits (1027), Expect = 2.970e-126 Identity = 200/298 (67.11%), Postives = 237/298 (79.53%), Query Frame = 1
Query: 235 LALACLLALASQAAAENDPISEPECDDGKTVSIRYSATSARLYLEAAIDGE-RGGCVTLSQIFTARGGKAPLYAIDPDTDERSTTETGTWLLTESLYVEDGITLNVHG-GDEGNADELRLQSSDDGFINLRGHGGSLSFHSTKVFAWDEDTKEVHDPSDYEEGRSYISVISEILQD-GQTCDGKAKSEMGEARMDIVSSDMGYLGYKGSEAYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMRENIQYGFDPHDDSDYLNIHDNEVYGNGNHG 1119
L A + A A+ A+ NDPIS+P+CD VSIRY++++ RLYLE+A DGE RGGCVTL QI+ R GKAPLYA+DP++ S ETGTWLLTE LYVEDGITL V+G G+ G+ADELRL S+ D +INLR HGGSL F TKVF+WD T + D +GRSYIS ISEI+ D +TC+G AK+ MGEARMDI +S++GYLG++ SE+YGLTWKVRGFCKDKSNP IFD+VNVYGN+YDSDIHH FG+YTYGHQQGDWRRNKM +N YGFDPHDDSD+L IHDNEVY NGNHG
Sbjct: 18 LLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESA-DGETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDE--DETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312
BLAST of mRNA_S-dermatodea_contig928.17343.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE) HSP 1 Score: 369 bits (948), Expect = 5.340e-115 Identity = 200/320 (62.50%), Postives = 232/320 (72.50%), Query Frame = 1
Query: 742 EILQDG-QTCDGKAKSEMGEARMDIVSSDMGYLGYKGSEAYGLTWKVRGFCKDKSNPEIFDDVNVYGNIYDSDIHHNYFGVYTYGHQQGDWRRNKMRENIQYGFDPHDDSDYLNIHDNEVYGNGNHGIIASKRCNDVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM--LESFGAVVSENTFTGNKYGVRMSVGCANNEITDNKITDSTKYNAYTYKGSDAPDVVDSGYSNTNTYSSNTITGGLETIKLKESVGMVFTDNTFVDATTIRFDDSTEVLMAGNTGLDSVTLKVANDACFASGSDAEFVPTC 1692
EI+ D + C+GKAK MGEARMDI S+M YLGY+GSE+YGLTWKVRGFCKD SNPE+FD+VNVYGNIYDSDIHHN+FGVYTYGH+QGDWRRNKM N +YGFDPHDDSD+L IHDNEVY NGNHGIIASKRCN XXXXXXXX XX M +ESF A VS N F NKYGVRMSVGCA+N + N I+DS++YN YTY+GSD P VVDSG S N +S NTITGG E+IKL + G F DNTF A T+RF+D+ + +M+GNTGL S TLKV+ ACF SD+++ P C
Sbjct: 6 EIITDSKEKCNGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLGSATLKVSKGACFDKKSDSDYKPVC 325 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig928.17343.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig928.17343.1 >prot_S-dermatodea_contig928.17343.1 ID=prot_S-dermatodea_contig928.17343.1|Name=mRNA_S-dermatodea_contig928.17343.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=496bp MVGYKSEKILALACLLALASQAAAENDPISEPECDDGKTVSIRYSATSARback to top mRNA from alignment at S-dermatodea_contig928:7171..13849- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig928.17343.1 ID=mRNA_S-dermatodea_contig928.17343.1|Name=mRNA_S-dermatodea_contig928.17343.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6679bp|location=Sequence derived from alignment at S-dermatodea_contig928:7171..13849- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig928:7171..13849- >mRNA_S-dermatodea_contig928.17343.1 ID=mRNA_S-dermatodea_contig928.17343.1|Name=mRNA_S-dermatodea_contig928.17343.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2976bp|location=Sequence derived from alignment at S-dermatodea_contig928:7171..13849- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |