prot_S-dermatodea_contig12841.1733.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12841.1733.1
Unique Nameprot_S-dermatodea_contig12841.1733.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length47
Homology
BLAST of mRNA_S-dermatodea_contig12841.1733.1 vs. uniprot
Match: D7FVR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR0_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 1.570e-18
Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 MSMPMSTDGERDMFWRAEWDPAEQAAQCREQFGVSPREGWAATEYGG 47
            MSMPMSTDG+RDMFWR +WDP  QAAQC EQFGVSP EGW A EYGG
Sbjct:  412 MSMPMSTDGKRDMFWRNDWDPVAQAAQCMEQFGVSPGEGWGAAEYGG 458          
BLAST of mRNA_S-dermatodea_contig12841.1733.1 vs. uniprot
Match: A0A6H5KGG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGG4_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 4.910e-18
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0
Query:    1 MSMPMSTDGERDMFWRAEWDPAEQAAQCREQFGVSPREGWAATEYGG 47
            MSMPMSTDG+RDMFWR +WDP  QAAQC EQ+GVSP EGW A EYGG
Sbjct:  277 MSMPMSTDGKRDMFWRNDWDPLAQAAQCMEQYGVSPGEGWGAAEYGG 323          
BLAST of mRNA_S-dermatodea_contig12841.1733.1 vs. uniprot
Match: C1N1S0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N1S0_MICPC)

HSP 1 Score: 65.5 bits (158), Expect = 3.820e-12
Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 0
Query:    3 MPMSTDGERDMFWRAEWDPAEQAAQCREQFGVSPREGWAATEYGG 47
            MP S DGERDMFW+  W+ +EQ A+C +++GV+PR GWA T++GG
Sbjct:    1 MPSSRDGERDMFWKQPWNESEQIARCEKRWGVTPRVGWATTQFGG 45          
BLAST of mRNA_S-dermatodea_contig12841.1733.1 vs. uniprot
Match: A0A7S4D8W0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8W0_HETAK)

HSP 1 Score: 61.2 bits (147), Expect = 4.100e-10
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 MSMPMSTDGERDMFWRAEWDPAEQAAQCREQFGVSPREGWAATEYGG 47
            M MP+STDG  DMFW + + P  +AA+C  Q+GV PRE WAAT+YGG
Sbjct:  165 MFMPLSTDGVEDMFWPSPFCPDAEAARCWTQWGVRPRETWAATQYGG 211          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12841.1733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FVR0_ECTSI1.570e-1880.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGG4_9PHAE4.910e-1878.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
C1N1S0_MICPC3.820e-1257.78Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S4D8W0_HETAK4.100e-1059.57Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12841contigS-dermatodea_contig12841:529..669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12841.1733.1mRNA_S-dermatodea_contig12841.1733.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12841 517..669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12841.1733.1 ID=prot_S-dermatodea_contig12841.1733.1|Name=mRNA_S-dermatodea_contig12841.1733.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=47bp
MSMPMSTDGERDMFWRAEWDPAEQAAQCREQFGVSPREGWAATEYGG
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