prot_S-dermatodea_contig9262.17320.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9262.17320.1
Unique Nameprot_S-dermatodea_contig9262.17320.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length154
Homology
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BLAST of mRNA_S-dermatodea_contig9262.17320.1 vs. uniprot
Match: A0A6H5JMY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY3_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.210e-38
Identity = 96/155 (61.94%), Postives = 113/155 (72.90%), Query Frame = 0 
Query:    1 MGKSGRTLLVALLALLVSPDVLGFSISPAGARRTGGSRWAAGRARSSGAVASVSMQAGESSYDGLVNRVETASKAPKVAPPAFRSQEPDAPVSIAEVQQQTASTAKVVTEQ-RAPAAAAGGDGQAYDSAVSIGSTGLQVVEGLAVLAAVPAILAA 154
            MGKSGRTLLVALLALLVSPDVLGFS+SPAGARR+      A R +   A  +++M A +  +D LV+RVETA+KAP  + P F+SQE DAP +IAEV++Q A          R P+  A G GQAYDSAVS+GS GLQVVEGLAVLAAVPAIL A
Sbjct:    1 MGKSGRTLLVALLALLVSPDVLGFSLSPAGARRSRQQHQRAPRGKRLSAARTLNMAA-DPRFDSLVDRVETAAKAPVESVPVFKSQEADAPATIAEVKEQVAPXXXXXXXXXRPPSVLAAGSGQAYDSAVSVGSVGLQVVEGLAVLAAVPAILTA 154
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BLAST of mRNA_S-dermatodea_contig9262.17320.1 vs. uniprot
Match: D8LKJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ5_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 2.460e-33
Identity = 90/155 (58.06%), Postives = 107/155 (69.03%), Query Frame = 0 
Query:    1 MGKSGRTLLVALLALLVSPDVLGFSISPAGARRTGGSRWAAGRARSSGAVASVSMQAGESSYDGLVNRVETASKAPKVAPPAFRSQEPDAPVSIAEVQQQTASTAKVVTEQRAPAAAAGGDGQ-AYDSAVSIGSTGLQVVEGLAVLAAVPAILAA 154
            MGKSGRTLLVALLALLVSPDVLGFS+SPAGARR+      A R + S A  +++M A +  +DGLV+RVETA+KAP+ + P F+SQE DAP +IAEV++Q                        AYDSAVS+GS GLQV EGLAVLAAVPAIL A
Sbjct:    1 MGKSGRTLLVALLALLVSPDVLGFSLSPAGARRSRQQHQRAPRGKRSSAARTLNMAA-DPRFDGLVDRVETAAKAPRESIPVFKSQEADAPATIAEVKEQVXXXXXXXXXXXXXXXXXXXXXXXAYDSAVSVGSVGLQVAEGLAVLAAVPAILTA 154
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9262.17320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JMY3_9PHAE2.210e-3861.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKJ5_ECTSI2.460e-3358.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..154
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.908
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9262contigS-dermatodea_contig9262:4459..8488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9262.17320.1mRNA_S-dermatodea_contig9262.17320.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9262 4307..8488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9262.17320.1 ID=prot_S-dermatodea_contig9262.17320.1|Name=mRNA_S-dermatodea_contig9262.17320.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=154bp
MGKSGRTLLVALLALLVSPDVLGFSISPAGARRTGGSRWAAGRARSSGAV
ASVSMQAGESSYDGLVNRVETASKAPKVAPPAFRSQEPDAPVSIAEVQQQ
TASTAKVVTEQRAPAAAAGGDGQAYDSAVSIGSTGLQVVEGLAVLAAVPA
ILAA
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