mRNA_S-dermatodea_contig9262.17319.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: D8LKJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKJ4_ECTSI) HSP 1 Score: 225 bits (573), Expect = 9.960e-66 Identity = 150/266 (56.39%), Postives = 168/266 (63.16%), Query Frame = 2
Query: 416 MNTSVESGPQAVAAAAANAEDENGSCSTILEGIDSCLRRWKAARHEGQVVLTELSNALLLRTFIDKGRG------ASGAGAVWGALANAGATVSQISVASEARARRLHGDLSALQDAMLAAASELRRHALAARRRWCHCRAT-EDAAERLSTARDGVLAGAEIGRAAAATDDV----------------AVIGGGYGLGDVADAASQVAEMLLKEALVTATVAQGVGE--CRDGREVLTVYAAAWMMQPYLDAQGLKGLETMVSGQ 1138
M+ +V SG A+ E E + L+ ID CLRRWKAARHEGQ VLT+LSNALLLRT++DKG A+ GAVWGALA AG TVS++SVA+E RARRLHGDLSALQDAM+AAA ELRRHA RRRW RA ED R S + G A A +GGGY L DVAD SQVAEML+KEALVTATV QGVG+ RD RE LTVYAAAWMMQPY+DA LK LE MV GQ
Sbjct: 1 MSAAVSSG---AASGIGEQEKERQDAAATLDEIDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDKGXXXXXXXRAATDGAVWGALAGAGTTVSRVSVATEHRARRLHGDLSALQDAMVAAAGELRRHAREVRRRWVSARAGGED--HRTSGSSSGAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGGGYALVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMVGGQ 261
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: A0A835Z1C5_9STRA (Costars domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C5_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.060e-22 Identity = 45/57 (78.95%), Postives = 55/57 (96.49%), Query Frame = 1
Query: 10 VGVTFGTLFDDEEGQQYFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDNVVITLLKPI 180
+GVT+G LFDDEEGQ YFEA++GTL+AAKKRGVVDF+GQMLLKGAHD+V++TLLKP+
Sbjct: 28 IGVTYGVLFDDEEGQDYFEALMGTLKAAKKRGVVDFQGQMLLKGAHDSVMVTLLKPL 84
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: A0A5B8MVS8_9CHLO (Costars domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MVS8_9CHLO) HSP 1 Score: 80.9 bits (198), Expect = 5.240e-15 Identity = 37/52 (71.15%), Postives = 46/52 (88.46%), Query Frame = 1
Query: 16 VTFGTLFDDEEGQQYFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDNVVITLL 171
V FG LF+DE+ +QY+EAIVGTL+AAKKRG +DFKGQMLLKGAHD+V + L+
Sbjct: 33 VKFGVLFEDEKVEQYYEAIVGTLKAAKKRGFIDFKGQMLLKGAHDDVDVILV 84
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: G0QMS5_ICHMG (Costars domain-containing protein n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QMS5_ICHMG) HSP 1 Score: 79.0 bits (193), Expect = 1.940e-14 Identity = 36/51 (70.59%), Postives = 44/51 (86.27%), Query Frame = 1
Query: 16 VTFGTLFDDEEGQQYFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDNVVITL 168
V FG LFDDE+ QQY+EA+VGTL+AAKK+GVVDF+GQ+LLKG HD + I L
Sbjct: 30 VPFGQLFDDEKAQQYYEALVGTLKAAKKQGVVDFQGQILLKGQHDKIEIIL 80
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: A0A6G0X2G9_9STRA (Costars domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2G9_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.940e-14 Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 1
Query: 13 GVTFGTLFDDEEGQQYFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDNVVITLL 171
GVTFG LFDDE Q FEA++GTLRAAK++ V+DF+GQ+LLKG HDNV I LL
Sbjct: 31 GVTFGILFDDERCQDLFEALMGTLRAAKRKKVIDFQGQLLLKGPHDNVFIRLL 83
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: B7FY17_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY17_PHATC) HSP 1 Score: 79.3 bits (194), Expect = 2.150e-14 Identity = 34/51 (66.67%), Postives = 46/51 (90.20%), Query Frame = 1
Query: 16 VTFGTLFDDEEGQQYFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDNVVITL 168
V FG LFDD+ QQ++EA+VGTL++AK+RGV+DFKGQMLLKG HD+V+I++
Sbjct: 41 VKFGELFDDDNVQQFYEALVGTLKSAKRRGVIDFKGQMLLKGMHDSVIISI 91
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: A0A7S2IC92_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IC92_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.810e-13 Identity = 37/54 (68.52%), Postives = 46/54 (85.19%), Query Frame = 1
Query: 16 VTFGTLFDDEEGQQYFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDNVVITLLKP 177
V FG LFDD+E Q Y+EA+VGTL++AK+RGVV FKGQMLLKG HDNV+I ++ P
Sbjct: 266 VAFGELFDDDEVQNYYEALVGTLKSAKRRGVVHFKGQMLLKGMHDNVMIDIVNP 319
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: F2UD85_SALR5 (Costars domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UD85_SALR5) HSP 1 Score: 77.0 bits (188), Expect = 2.340e-13 Identity = 34/55 (61.82%), Postives = 48/55 (87.27%), Query Frame = 1
Query: 10 VGVTFGTLFDDEEGQQYFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDNVVITLLK 174
+ VTFG +F DE +Q E++VGT++AA+KRG++DFKGQ+LL+GAHD+VV+TLLK
Sbjct: 61 IQVTFGEIFRDEVLEQQLESLVGTMKAARKRGLIDFKGQILLQGAHDDVVVTLLK 115
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: UPI001939589C (costars family protein ABRACL-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939589C) HSP 1 Score: 76.3 bits (186), Expect = 3.710e-13 Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 1
Query: 10 VGVTFGTLFDDEEGQQYFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDNVVITLLK 174
+ VTFGTLF D+ FEA+VGTLRAAKK+ +VD++G++LL+G HDNV ITLLK
Sbjct: 54 ISVTFGTLFADDRCANIFEALVGTLRAAKKKKIVDYQGELLLQGVHDNVPITLLK 108
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: A0A2R5G5I4_9STRA (Costars family protein ABRACL n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5I4_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 5.450e-13 Identity = 34/52 (65.38%), Postives = 45/52 (86.54%), Query Frame = 1
Query: 16 VTFGTLFDDEEGQQYFEAIVGTLRAAKKRGVVDFKGQMLLKGAHDNVVITLL 171
V FG LFDD++ QQ++EAIVGTL+AA+ +G +D+KG +LLKGAHD+V ITLL
Sbjct: 33 VKFGVLFDDDKTQQFYEAIVGTLKAARTKGFIDWKGMILLKGAHDDVDITLL 84 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig9262.17319.1 >prot_S-dermatodea_contig9262.17319.1 ID=prot_S-dermatodea_contig9262.17319.1|Name=mRNA_S-dermatodea_contig9262.17319.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=247bp MMNTSVESGPQAVAAAAANAEDENGSCSTILEGIDSCLRRWKAARHEGQVback to top mRNA from alignment at S-dermatodea_contig9262:864..3356+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig9262.17319.1 ID=mRNA_S-dermatodea_contig9262.17319.1|Name=mRNA_S-dermatodea_contig9262.17319.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=2493bp|location=Sequence derived from alignment at S-dermatodea_contig9262:864..3356+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig9262:864..3356+ >mRNA_S-dermatodea_contig9262.17319.1 ID=mRNA_S-dermatodea_contig9262.17319.1|Name=mRNA_S-dermatodea_contig9262.17319.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1482bp|location=Sequence derived from alignment at S-dermatodea_contig9262:864..3356+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |