prot_S-dermatodea_contig9262.17319.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9262.17319.1
Unique Nameprot_S-dermatodea_contig9262.17319.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length247
Homology
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BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: D8LKJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKJ4_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 8.060e-70
Identity = 150/266 (56.39%), Postives = 168/266 (63.16%), Query Frame = 0 
Query:    2 MNTSVESGPQAVAAAAANAEDENGSCSTILEGIDSCLRRWKAARHEGQVVLTELSNALLLRTFIDKGRG------ASGAGAVWGALANAGATVSQISVASEARARRLHGDLSALQDAMLAAASELRRHALAARRRWCHCRAT-EDAAERLSTARDGVLAGAEIGRAAAATDDV----------------AVIGGGYGLGDVADAASQVAEMLLKEALVTATVAQGVGE--CRDGREVLTVYAAAWMMQPYLDAQGLKGLETMVSGQ 242
            M+ +V SG    A+     E E    +  L+ ID CLRRWKAARHEGQ VLT+LSNALLLRT++DKG        A+  GAVWGALA AG TVS++SVA+E RARRLHGDLSALQDAM+AAA ELRRHA   RRRW   RA  ED   R S +  G  A                              A +GGGY L DVAD  SQVAEML+KEALVTATV QGVG+   RD RE LTVYAAAWMMQPY+DA  LK LE MV GQ
Sbjct:    1 MSAAVSSG---AASGIGEQEKERQDAAATLDEIDGCLRRWKAARHEGQAVLTDLSNALLLRTYVDKGXXXXXXXRAATDGAVWGALAGAGTTVSRVSVATEHRARRLHGDLSALQDAMVAAAGELRRHAREVRRRWVSARAGGED--HRTSGSSSGAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVGGGYALVDVADTTSQVAEMLMKEALVTATVVQGVGQEHGRDDREALTVYAAAWMMQPYVDAGRLKELEVMVGGQ 261
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BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Match: A0A835ZE08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE08_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.510e-5
Identity = 31/72 (43.06%), Postives = 39/72 (54.17%), Query Frame = 0 
Query:  172 GGYGLGDVADAASQVAEMLLKEALVTATVAQGVGECRDGREVLTVYAAAWMMQPYLDAQGLKGLETMVSGQK 243
            GGY   D+A AA  +  ML +E  V   V    G+C   R+ LT+YAAAWMMQPY++    K L  M    K
Sbjct:  116 GGYSAADIAQAALALGRMLEREVAVAEAVCADAGDC-SSRDTLTLYAAAWMMQPYMERGLWKDLLRMTETGK 186
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9262.17319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKJ4_ECTSI8.060e-7056.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZE08_9STRA1.510e-543.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9262contigS-dermatodea_contig9262:1966..2706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9262.17319.1mRNA_S-dermatodea_contig9262.17319.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9262 864..3356 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9262.17319.1 ID=prot_S-dermatodea_contig9262.17319.1|Name=mRNA_S-dermatodea_contig9262.17319.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=247bp
MMNTSVESGPQAVAAAAANAEDENGSCSTILEGIDSCLRRWKAARHEGQV
VLTELSNALLLRTFIDKGRGASGAGAVWGALANAGATVSQISVASEARAR
RLHGDLSALQDAMLAAASELRRHALAARRRWCHCRATEDAAERLSTARDG
VLAGAEIGRAAAATDDVAVIGGGYGLGDVADAASQVAEMLLKEALVTATV
AQGVGECRDGREVLTVYAAAWMMQPYLDAQGLKGLETMVSGQKKRA*
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