prot_S-dermatodea_contig1284.1731.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig1284.1731.1
Unique Name	prot_S-dermatodea_contig1284.1731.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	193

Homology

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BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot
Match: D7G727_ECTSI (Coatomer subunit delta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G727_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 3.040e-95
Identity = 165/186 (88.71%), Postives = 170/186 (91.40%), Query Frame = 0

Query:    1 VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGKNLATRKRIQARNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEDKVGSKAFELVFAFDEVITTGGHKESITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEA 186
            VVLSA+ITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTG            NKQHTFIET+TVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGG+TEDKV SK+FELVFAFDEVITTGGHKE+ITLQQIKTNMEMDSHEERLH MIQDSKREAAKEEA RRAKELREK KEA
Sbjct:   16 VVLSASITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTG------------NKQHTFIETETVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGVTEDKVMSKSFELVFAFDEVITTGGHKENITLQQIKTNMEMDSHEERLHTMIQDSKREAAKEEADRRAKELREKAKEA 189

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BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot
Match: A0A835ZBZ4_9STRA (Coatomer subunit delta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBZ4_9STRA)

HSP 1 Score: 263 bits (672), Expect = 1.470e-82
Identity = 139/184 (75.54%), Postives = 161/184 (87.50%), Query Frame = 0

Query:    1 VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGKNLATRKRIQARNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEDKVGSKAFELVFAFDEVITTGGHKESITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQK 184
            VVLSAAITT+NGKALLARQ+VDMSRIRIEGLLAAFPKLMGTG            NKQHTFIETD+VRY+YQP+E LFLLL+TNK SNIVEDLETLRMLSKVVPDVAGG+ EDKV ++ FELVFAFDEV+T GG +E+I L Q+K N+EMDSHEERLHNMIQ+SKREAA++EA R+A+E+R++QK
Sbjct:   11 VVLSAAITTKNGKALLARQYVDMSRIRIEGLLAAFPKLMGTG------------NKQHTFIETDSVRYIYQPMETLFLLLITNKGSNIVEDLETLRMLSKVVPDVAGGVAEDKVAARCFELVFAFDEVLTAGGMRETIALPQVKVNLEMDSHEERLHNMIQESKREAARDEAARKAQEMRQRQK 182

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BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot
Match: A0A4D9DAV0_9STRA (Coatomer subunit delta n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAV0_9STRA)

HSP 1 Score: 250 bits (639), Expect = 1.490e-77
Identity = 132/182 (72.53%), Postives = 159/182 (87.36%), Query Frame = 0

Query:    1 VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGKNLATRKRIQARNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEDKVGSKAFELVFAFDEVITTGGHKESITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREK 182
            VVLS AI T+NGKALL+RQFV+MSRIRIEGLLAAFPKL+G+G+            KQHTFIETDTVRYVYQPI+NLFLLL+TNKASNIVEDLETLR+LSK+VPDVAGG+TE++V  K FELVFAFDEV+TTGG++ES+TLQQIKTNMEMDSHEE+L  MI+ SK ++AK++A R+AK ++E+
Sbjct:    2 VVLSGAICTKNGKALLSRQFVEMSRIRIEGLLAAFPKLLGSGEE-----------KQHTFIETDTVRYVYQPIDNLFLLLITNKASNIVEDLETLRLLSKIVPDVAGGVTEERVSDKCFELVFAFDEVLTTGGYRESVTLQQIKTNMEMDSHEEKLALMIKQSKMDSAKDQAARQAKAIKER 172

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BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot
Match: A0A7S2RJQ4_9STRA (Coatomer subunit delta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJQ4_9STRA)

HSP 1 Score: 244 bits (624), Expect = 3.310e-75
Identity = 129/181 (71.27%), Postives = 155/181 (85.64%), Query Frame = 0

Query:    1 VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGKNLATRKRIQARNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEDKVGSKAFELVFAFDEVITTGGHKESITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELRE 181
            VVLSA++ T+NGKAL+ARQFV MSRIRIEGLLAAFPKL+G+          +A+N QHTFIETD+VRYVYQPIENLFLL++TNKASNIVEDLETLR+LSK+VP+  GGLTEDK+  K F+L+FAFDEVITTGGH+ESITLQQI+ N+ M+SHEE+LH MI+ SK  +AKEEA R+AK L+E
Sbjct:   20 VVLSASVCTKNGKALVARQFVGMSRIRIEGLLAAFPKLVGS----------EAKNTQHTFIETDSVRYVYQPIENLFLLIITNKASNIVEDLETLRLLSKLVPETCGGLTEDKITDKMFDLIFAFDEVITTGGHRESITLQQIQVNVSMESHEEKLHKMIEQSKVSSAKEEADRKAKALQE 190

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BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot
Match: A0A6V1W7X3_HETAK (Coatomer subunit delta (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1W7X3_HETAK)

HSP 1 Score: 231 bits (590), Expect = 1.010e-74
Identity = 123/185 (66.49%), Postives = 154/185 (83.24%), Query Frame = 0

Query:    1 VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGKNLATRKRIQARNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEDKVGSKAFELVFAFDEVITTGGHKESITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKE 185
            VVLSAA+ T+NG+ L+ARQFV+M+RIRIEGL+AAFPKL+G G            +KQHTFIET++VRYVYQP+E L+L+LVTNKASNIV+DL+TLR+LSKVVPDV GG TE++V  K F+LVFAFDE I +GG++E+ITL QI+TNMEMDSHEE+LH MIQ +K E AKEE+ R+AK +RE+ KE
Sbjct:    2 VVLSAAVVTKNGRVLVARQFVEMTRIRIEGLMAAFPKLLGGG------------SKQHTFIETESVRYVYQPLEQLYLVLVTNKASNIVQDLDTLRLLSKVVPDVCGGSTEERVQDKCFDLVFAFDEAINSGGYREAITLGQIRTNMEMDSHEEKLHQMIQKTKMENAKEESARQAKIMRERAKE 174

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BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot
Match: F0YG49_AURAN (Coatomer subunit delta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG49_AURAN)

HSP 1 Score: 236 bits (601), Expect = 3.220e-72
Identity = 119/186 (63.98%), Postives = 160/186 (86.02%), Query Frame = 0

Query:    1 VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGKNLATRKRIQARNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEDKVGSKAFELVFAFDEVITTGGHKESITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEA 186
            VVLSA++ T+NG+ L ARQFV+M+R+R+EGLLAAFPKLMGTG            NKQHTFIETD+VRYV+QP+E+++LLL+TNKASNIVEDLETLR+LSKVVP++AGG +E+K+  KAF+LVFAFDEVITTGG++E+I L+QI+TN+EMDSHEE+LHNM++ +K ++AK++A   +K ++ +Q+EA
Sbjct:    2 VVLSASVCTKNGRCLFARQFVEMNRLRVEGLLAAFPKLMGTG------------NKQHTFIETDSVRYVWQPVESIYLLLITNKASNIVEDLETLRLLSKVVPEIAGGHSEEKLSDKAFDLVFAFDEVITTGGYREAIDLRQIRTNLEMDSHEEKLHNMVKKTKMDSAKDQAAHMSKVIKSRQREA 175

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BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot
Match: A0A7S2MQW5_9STRA (Coatomer subunit delta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MQW5_9STRA)

HSP 1 Score: 236 bits (601), Expect = 4.480e-72
Identity = 123/183 (67.21%), Postives = 155/183 (84.70%), Query Frame = 0

Query:    1 VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGKNLATRKRIQARNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEDKVGSKAFELVFAFDEVITTGGHKESITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQ 183
            VVLSAA+ T+NG+ALLARQ+VDM+RIRIEGLLAAFPKLMGTG            ++QHTF+ETD+VRYVYQPIE L+LL++TNKASNIVEDLETLR+LSK+VP++A G+TE+K+  K FELVFAFDEV+T GGH+ESIT+ QI+ N+ M+SHEE+LH MI++SK  + KEEA RRAK ++E+Q
Sbjct:    2 VVLSAAVCTKNGRALLARQYVDMTRIRIEGLLAAFPKLMGTG------------SQQHTFLETDSVRYVYQPIETLYLLVITNKASNIVEDLETLRLLSKLVPEIAEGVTEEKILDKMFELVFAFDEVLTPGGHRESITMPQIQVNLSMESHEEKLHKMIEESKVSSTKEEADRRAKTIKEQQ 172

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BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot
Match: A0A7S3ZRB7_9STRA (Coatomer subunit delta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRB7_9STRA)

HSP 1 Score: 235 bits (599), Expect = 8.110e-72
Identity = 119/187 (63.64%), Postives = 160/187 (85.56%), Query Frame = 0

Query:    1 VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGKNLATRKRIQARNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEDKVGSKAFELVFAFDEVITTGGHKESITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAV 187
            V+LSAA+TT+NG+ALL+RQFVDM+R+R+EGLLAAFPKL GTG            NKQHTF+ETD+VRYVYQP+E++FLLL+TNKASNIVEDLETLR+LSKVVP++AGG +EDKV   AFELVFAFDEVITTGG++E+I ++ I+ N++MDSHEE+L NM++ SK +AAK++A   ++ ++++Q++A+
Sbjct:    2 VILSAAVTTKNGRALLSRQFVDMNRLRVEGLLAAFPKLQGTG------------NKQHTFVETDSVRYVYQPVESIFLLLITNKASNIVEDLETLRLLSKVVPEIAGGTSEDKVSDHAFELVFAFDEVITTGGYRETIDMRTIRQNLDMDSHEEKLANMVKKSKLDAAKDQAKHMSQVIKQRQRDAM 176

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BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot
Match: A0A7S3H6H8_9STRA (Coatomer subunit delta n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6H8_9STRA)

HSP 1 Score: 224 bits (570), Expect = 2.290e-67
Identity = 122/190 (64.21%), Postives = 155/190 (81.58%), Query Frame = 0

Query:    1 VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGKNLATRKRIQARNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSKVVPDVAG---GLTEDKVGSKAFELVFAFDEVITTGGHKESITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAV 187
            VVLSAA+ T+ GKAL+ARQFVD+SRIRIEG+LAAFPKLMGT              +QHTF+ET+ VRYVYQ ++NL+LLL+TN+ASNIVEDLETLR+LSKV+P+VAG    LTE+ V  K+FEL+FA DEVITTGG++E I LQQI+TNMEM+SHEE+LHNMI+ SK E+AK++A   A+ +++KQKE +
Sbjct:    8 VVLSAAVCTKGGKALVARQFVDVSRIRIEGMLAAFPKLMGTDAK-----------QQHTFVETEAVRYVYQLLDNLYLLLITNRASNIVEDLETLRLLSKVIPNVAGVMTNLTEEHVADKSFELMFALDEVITTGGYREPINLQQIRTNMEMESHEEKLHNMIKISKMESAKDQASVAARAIKDKQKEQM 186

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BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot
Match: A0A6S8RNU9_9STRA (Coatomer subunit delta n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8RNU9_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.240e-66
Identity = 120/190 (63.16%), Postives = 153/190 (80.53%), Query Frame = 0

Query:    1 VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGKNLATRKRIQARNKQHTFIETDTVRYVYQPIEN-LFLLLVTNKASNIVEDLETLRMLSKVVPDVAGGLTEDKVGSKAFELVFAFDEVITTGGHKESITLQQIKTNMEMDSHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAVSN 189
            VVLSA+I TR GKAL++RQFV+M+R+R+EGLLAAFPKLMG              +KQHTF+ETDTVRYVYQP+EN L+LLLVT KASNIVEDL TLR+L+KVVPDVAGG+ E+ +   AFEL+FAFDEV+T+GG+KE  TL  I+TN++M+SHEE +HNMI++SK +AA EE  R+AK ++EK+  A+ N
Sbjct:   29 VVLSASICTRGGKALVSRQFVEMNRMRVEGLLAAFPKLMG-------------HSKQHTFVETDTVRYVYQPLENQLYLLLVTTKASNIVEDLGTLRLLAKVVPDVAGGVQENSINEHAFELIFAFDEVLTSGGYKEEATLSSIRTNLQMESHEENMHNMIKESKEKAAAEEGKRQAKAMQEKKMAALRN 205

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig1284.1731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G727_ECTSI	3.040e-95	88.71	Coatomer subunit delta n=2 Tax=Ectocarpus TaxID=28...	[more]
A0A835ZBZ4_9STRA	1.470e-82	75.54	Coatomer subunit delta n=1 Tax=Tribonema minus Tax...	[more]
A0A4D9DAV0_9STRA	1.490e-77	72.53	Coatomer subunit delta n=1 Tax=Nannochloropsis sal...	[more]
A0A7S2RJQ4_9STRA	3.310e-75	71.27	Coatomer subunit delta n=1 Tax=Rhizochromulina mar...	[more]
A0A6V1W7X3_HETAK	1.010e-74	66.49	Coatomer subunit delta (Fragment) n=1 Tax=Heterosi...	[more]
F0YG49_AURAN	3.220e-72	63.98	Coatomer subunit delta n=1 Tax=Aureococcus anophag...	[more]
A0A7S2MQW5_9STRA	4.480e-72	67.21	Coatomer subunit delta n=1 Tax=Dictyocha speculum ...	[more]
A0A7S3ZRB7_9STRA	8.110e-72	63.64	Coatomer subunit delta n=1 Tax=Pelagomonas calceol...	[more]
A0A7S3H6H8_9STRA	2.290e-67	64.21	Coatomer subunit delta n=1 Tax=Spumella elongata T...	[more]
A0A6S8RNU9_9STRA	1.240e-66	63.16	Coatomer subunit delta n=2 Tax=Ditylum brightwelli...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 165..189
None	No IPR available	GENE3D	3.30.450.60		coord: 2..153 e-value: 1.4E-9 score: 40.0
None	No IPR available	PANTHER	PTHR10121:SF0	COATOMER SUBUNIT DELTA	coord: 1..188
IPR027059	Coatomer delta subunit	PANTHER	PTHR10121	COATOMER SUBUNIT DELTA	coord: 1..188
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 5..154

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig1284	contig	S-dermatodea_contig1284:122..1806 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig1284.1731.1	mRNA_S-dermatodea_contig1284.1731.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig1284 122..1806 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig1284.1731.1 ID=prot_S-dermatodea_contig1284.1731.1|Name=mRNA_S-dermatodea_contig1284.1731.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=193bp
VVLSAAITTRNGKALLARQFVDMSRIRIEGLLAAFPKLMGTGKNLATRKR
IQARNKQHTFIETDTVRYVYQPIENLFLLLVTNKASNIVEDLETLRMLSK
VVPDVAGGLTEDKVGSKAFELVFAFDEVITTGGHKESITLQQIKTNMEMD
SHEERLHNMIQDSKREAAKEEAGRRAKELREKQKEAVSNEHPG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027059	Coatomer_dsu
IPR011012	Longin-like_dom_sf