prot_S-dermatodea_contig9213.17281.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9213.17281.1
Unique Nameprot_S-dermatodea_contig9213.17281.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length122
Homology
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BLAST of mRNA_S-dermatodea_contig9213.17281.1 vs. uniprot
Match: D8LUC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC5_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 6.090e-40
Identity = 69/112 (61.61%), Postives = 77/112 (68.75%), Query Frame = 0 
Query:    9 LLAVFGVSEDDGALVLILGMVLLGLTVMACCYCKVYDPLKLWSIAAYNKHCKKRPKEDDGPPPDARPPAEREHWYLNKTLAIDREDRDELGPQRDVKGLQGGWYGARNGGFN 120
            L  VFGVSEDDGA VLI G+++ GLT  ACCYCKVYDPL+ WSI  YN+ CKK                 R HWYLN+TL IDR DRDELGPQ    GL+GGWYGARNGGF+
Sbjct:   13 LFDVFGVSEDDGAYVLIAGLIMGGLTFTACCYCKVYDPLRNWSIKTYNRCCKKXXXXXXXXXXXXXXXXXRRHWYLNQTLQIDRADRDELGPQGARTGLKGGWYGARNGGFD 124
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9213.17281.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUC5_ECTSI6.090e-4061.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..121
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availableTMHMMTMhelixcoord: 20..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9213contigS-dermatodea_contig9213:64..2315 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9213.17281.1mRNA_S-dermatodea_contig9213.17281.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9213 9..4243 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9213.17281.1 ID=prot_S-dermatodea_contig9213.17281.1|Name=mRNA_S-dermatodea_contig9213.17281.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=122bp
MEEDDQQRLLAVFGVSEDDGALVLILGMVLLGLTVMACCYCKVYDPLKLW
SIAAYNKHCKKRPKEDDGPPPDARPPAEREHWYLNKTLAIDREDRDELGP
QRDVKGLQGGWYGARNGGFNA*
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