prot_S-dermatodea_contig1282.1724.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: D8LK53_ECTSI (HTH La-type RNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK53_ECTSI) HSP 1 Score: 300 bits (767), Expect = 6.820e-96 Identity = 205/350 (58.57%), Postives = 230/350 (65.71%), Query Frame = 0
Query: 7 SGGHTKPSSSTPVKWTLVEAEPETPEGRRTKQQGYGRARAHGGAGXXXXAGNWRSGRDAGRXXXXXXFSGG-HRGNRRGGXXXXXXXTRHNQGXXXXXXXXXXXXXXXXXXXXXYVG-ATYYPSPQNFNEPNFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAAVSEDPAAATFDGALEQGTGDGKAETEGAPKADETNALAPQDDAVPPAKEDSAETTTASAEAVAEDTTEAGPASENGALVDGKTELTPTAPAWTPGGDAKANAVEEQ 354
S G+ KPS+STPVKWTLVEA ETPEGRR K Q + R GA GNW GRD XXXXXX +RG RRGG +R+NQG XXXXXXXX YVG ATYYP+ N +FEEQ++YMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGV+L+DI+AGILASD LQVDTENETMRM+EGWEVWLLPNQATGKQGVPRYIKVDPA D T + T A P A++T +D K++ T AE + ++E G S A KTELTP APAWTP G A +AV+EQ
Sbjct: 5 SSGNAKPSASTPVKWTLVEAVAETPEGRRHKHQSHAGQRKGPGARGSGYTGNWGQGRDGXXXXXXXXXXXXXNRGQRRGGGAG----SRNNQGQXXXXXXXXG-----------YVGGATYYPTQANVGAESFEEQKAYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVELEDITAGILASDTLQVDTENETMRMREGWEVWLLPNQATGKQGVPRYIKVDPAVSEADRVNGTEPSGIPAQTTQDAASAGDVPGAEDTQTSLKEDSTAGAEKKEGDSVTGPVAEEEQQRSSEKGQVSHEDAA---KTELTPLAPAWTPVG-ASTDAVQEQ 335
BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A836CAE4_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAE4_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.880e-34 Identity = 71/138 (51.45%), Postives = 93/138 (67.39%), Query Frame = 0
Query: 139 EQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDP--------------AAVSEDPAA-ATFDGA 261
E + AV+Q+E+YF+V NLC D+FMRSYMD EGYIP+AFVANFPG A G + DI + +S+ML+ D NETMR++EGW++W+LPN A+G GVPRYIK+ AA SE+P+A AT +GA
Sbjct: 5 EAKKMAAEYAVKQMEWYFSVHNLCSDVFMRSYMDTEGYIPVAFVANFPGCASLGAEFTDILEALKSSEMLEFDEANETMRLREGWDMWILPN-ASGGLGVPRYIKLSEDEAAKIAAQQEAQAAAKSEEPSAEATMNGA 141
BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A7S1UC17_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UC17_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.610e-25 Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 0
Query: 135 PNFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKV 244
P E R AVR IE F+ +LC D ++R MD EGYIP+AFVAN+P VA++G +D+ +GI +S++L++D ENETMR++E W+ WL P+ G G PRY+KV
Sbjct: 72 PARHENRHLFAASAVRAIEMTFSPNHLCTDEWLRQNMDVEGYIPVAFVANYPHVAQYGALYEDLLSGIASSEILELDAENETMRLRENWQQWLFPD-GKGGMGCPRYVKV 180
BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: K8ZBX0_NANGC (Rna-binding la domain protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZBX0_NANGC) HSP 1 Score: 112 bits (281), Expect = 4.260e-25 Identity = 58/139 (41.73%), Postives = 83/139 (59.71%), Query Frame = 0
Query: 123 ATYYPSPQNFNEP--------------NFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGIL-ASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDP 246
Y+P PQ P N E R Y+ ++AV+QIE+YF+V+NLCRD ++R+++DEEG++P+A + NFP VA F D +I + AS +L+ D NET+R+KE WLLPN G G PR++K P
Sbjct: 24 GVYFPQPQPQYLPAHIGTAVRSSLMTMNALEAREYLASMAVQQIEYYFSVDNLCRDTYLRAHLDEEGWVPLALICNFPTVASFAADYSEIVKTLQEASSVLEYDEANETLRLKEKATAWLLPN-GRGGMGCPRWLKQAP 161
BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A7R9U3W9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3W9_9STRA) HSP 1 Score: 115 bits (287), Expect = 4.800e-25 Identity = 56/127 (44.09%), Postives = 81/127 (63.78%), Query Frame = 0
Query: 135 PNFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAA-VSEDPAAATFDG 260
P E R+ + AVR IE F+ +LC D F+R +MD GY+P+A VAN+ VA++G +D+ AG+ S++LQ+D ENET+R++E WE WL P+ G G PRY+KV P +D + +T DG
Sbjct: 220 PASNENRTMLAASAVRAIEMTFSPNHLCTDEFLRQHMDVAGYVPVALVANYSHVAQYGALYEDLLAGLANSELLQLDAENETVRLRENWEQWLFPD-GKGGMGCPRYVKVSPVPPTDQDASGSTADG 345
BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A4D9CXU2_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXU2_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.390e-23 Identity = 59/146 (40.41%), Postives = 85/146 (58.22%), Query Frame = 0
Query: 123 ATYYPSPQNFNEP--------------NFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGIL-ASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAAVSEDP 253
Y+P PQ P N E R Y+ ++AV+QIE+YF+V+NLCRD ++R+++DEEG++P+AF+ NFP VA F D +I + S +L+ D NET+R+KE WLLPN G G PR++K P + P
Sbjct: 266 GVYFPRPQPQYLPAHIGTAVRSSLMTMNALEAREYLASMAVQQIEYYFSVDNLCRDTYLRAHLDEEGWVPLAFICNFPTVASFAADYLEIVKTLQEVSSVLEYDEANETLRLKEKATAWLLPN-GRGGVGCPRWLKQAPDTPPQQP 410
BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A2P4X4J6_9STRA (La domain family n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X4J6_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.320e-22 Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 0
Query: 148 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAAVSEDPA 254
A QIEFYFT +NL RDIF+R +MD +GY+P+AFV +F V D + + + S+ +++D +NE +R++EGW+ W+ PN A G GVPRYIKV A +E+PA
Sbjct: 121 AKNQIEFYFTSDNLVRDIFLRQHMDVDGYVPLAFVGSFQAVYSVHQDYESLLEAMKNSETIELDEQNEKIRLREGWQKWVWPN-AEGGYGVPRYIKV---AENEEPA 223
BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: V9E4H7_PHYPR (HTH La-type RNA-binding domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9E4H7_PHYPR) HSP 1 Score: 103 bits (257), Expect = 4.200e-22 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 0
Query: 120 YVGATYYPSPQNFNEPNFEEQRSYMTNLAVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKV 244
YV Y P+P A QIEFYFT +NL RDIF+R +MD +GY+P+AFV +F V D + + + S+ +++D +NE +R+++GWE W+ PN A G GVPRYIK+
Sbjct: 110 YVNGVYVPTPDV----------KVTAQWAKNQIEFYFTSDNLVRDIFLRQHMDVDGYVPLAFVGSFQAVYSVHQDYESLLEAMKNSETVELDEQNEKIRLRDGWEKWVWPN-AVGGYGVPRYIKL 223
BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: A0A225VMU3_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VMU3_9STRA) HSP 1 Score: 102 bits (254), Expect = 8.910e-22 Identity = 47/104 (45.19%), Postives = 69/104 (66.35%), Query Frame = 0
Query: 148 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAAVSE 251
A QIEFYFT +NL RDIF+R +MD +G++P+AFV +F V D + + + SD +++D +NE +R++EGW+ W+ PN A G GVPRYIK++ E
Sbjct: 121 AKNQIEFYFTSDNLVRDIFLRQHMDVDGFVPLAFVGSFQAVYSVHQDYESLLEAMKHSDSVELDEQNEKIRLREGWQKWVWPN-AEGGYGVPRYIKLENETADE 223
BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Match: H3GP14_PHYRM (HTH La-type RNA-binding domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GP14_PHYRM) HSP 1 Score: 102 bits (254), Expect = 9.110e-22 Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = 0
Query: 148 AVRQIEFYFTVENLCRDIFMRSYMDEEGYIPIAFVANFPGVARFGVDLQDISAGILASDMLQVDTENETMRMKEGWEVWLLPNQATGKQGVPRYIKVDPAAVSEDPAAA 256
A QIEFYFT +NL RDIF+R +MD +G++P+AFV +F V D + + + SD +++D +NE +R+++GW+ W+ PN A G GVPRYIK+ A +E PA A
Sbjct: 122 AKNQIEFYFTNDNLVRDIFLRQHMDVDGFVPLAFVGSFQAVYSVHQDYESLLEAMKNSDTMELDEQNEKIRLRQGWQTWVWPN-ADGGYGVPRYIKL---AENETPAEA 226 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1282.1724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-dermatodea_contig1282.1724.1 ID=prot_S-dermatodea_contig1282.1724.1|Name=mRNA_S-dermatodea_contig1282.1724.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=379bpback to top |