mRNA_S-dermatodea_contig1282.1723.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig1282.1723.1
Unique NamemRNA_S-dermatodea_contig1282.1723.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig1282.1723.1 vs. uniprot
Match: D8LK52_ECTSI (Lactoylglutathione lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK52_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 1.100e-110
Identity = 164/189 (86.77%), Postives = 174/189 (92.06%), Query Frame = 1 
Query:  343 AQIA-YTQGIDDSICNEPDHATKDFIMQQTMLRIKDPKRSLDFYTRVLGMRLMQELHFSEWEFSIYFVGYCGENDIPSDPKERTRWCFQQAGAVELTHNWGTEADADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFILDPDGYSIEVLSADQMAKDFSQYTPGGLST 906
            AQ+A    GIDD+ICN PD +TKDFIMQQTMLRIK+P  SLDFYTRVLGMRLMQELHF+EWEFSIYFVGYC  ++IPSDPKERTRWCFQQAGAVELTHNWGTE DA LKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFI DPDGYSIE+L ADQM+KDFS+YTPGG ST
Sbjct:    5 AQMAGRPDGIDDAICNTPDPSTKDFIMQQTMLRIKNPHSSLDFYTRVLGMRLMQELHFAEWEFSIYFVGYCDPSEIPSDPKERTRWCFQQAGAVELTHNWGTENDAALKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIFDPDGYSIEILGADQMSKDFSKYTPGGEST 193
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BLAST of mRNA_S-dermatodea_contig1282.1723.1 vs. uniprot
Match: A0A6H5KMV4_9PHAE (Lactoylglutathione lyase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV4_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 2.010e-91
Identity = 140/160 (87.50%), Postives = 148/160 (92.50%), Query Frame = 1 
Query:  343 AQIA-YTQGIDDSICNEPDHATKDFIMQQTMLRIKDPKRSLDFYTRVLGMRLMQELHFSEWEFSIYFVGYCGENDIPSDPKERTRWCFQQAGAVELTHNWGTEADADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIL 819
            AQ+A    GIDD+ICN PD +TKDFIMQQTMLRIK+P  SLDFYTRVLGMRLMQELHF+EWEFSIYFVGYC  ++IP+DPKERTRWCFQQAGAVELTHNWGTE DADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFI 
Sbjct:   53 AQMAGRPDGIDDAICNTPDPSTKDFIMQQTMLRIKNPHLSLDFYTRVLGMRLMQELHFAEWEFSIYFVGYCDPSEIPADPKERTRWCFQQAGAVELTHNWGTENDADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFIF 212
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BLAST of mRNA_S-dermatodea_contig1282.1723.1 vs. uniprot
Match: UPI001E1D4D5D (lactoylglutathione lyase-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4D5D)

HSP 1 Score: 253 bits (647), Expect = 4.480e-74
Identity = 115/166 (69.28%), Postives = 131/166 (78.92%), Query Frame = 1 
Query:  382 CNEPDHATKDFIMQQTMLRIKDPKRSLDFYTRVLGMRLMQELHFSEWEFSIYFVGYCGENDIPSDPKERTRWCFQQAGAVELTHNWGTEADADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFILDPDGYSIEVLSADQMAKDFS 879
            C+EPD +TKDFIMQQTM RIKDPKRSL+FYT VLGMRL+Q   F   +FS+YF+GY    DIP D KER RW F +   +ELTHNWGTE +    YH+GN DPRGFGHIG+ VPDVYKACERFEK  VKF KTPDGG MKGLAFI DPDGY IE+LSA+QMA+D +
Sbjct:   15 CHEPDESTKDFIMQQTMYRIKDPKRSLEFYTNVLGMRLLQRFDFPAMKFSLYFMGYEKAEDIPEDNKERVRWTFSRPATIELTHNWGTEKEEGEPYHNGNSDPRGFGHIGLNVPDVYKACERFEKMDVKFIKTPDGGKMKGLAFIQDPDGYWIEILSANQMAQDMT 180
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BLAST of mRNA_S-dermatodea_contig1282.1723.1 vs. uniprot
Match: A0A7L0FFD8_CORCN (Lactoylglutathione lyase (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7L0FFD8_CORCN)

HSP 1 Score: 244 bits (624), Expect = 5.970e-71
Identity = 112/178 (62.92%), Postives = 134/178 (75.28%), Query Frame = 1 
Query:  343 AQIAYTQGIDDSI----CNEPDHATKDFIMQQTMLRIKDPKRSLDFYTRVLGMRLMQELHFSEWEFSIYFVGYCGENDIPSDPKERTRWCFQQAGAVELTHNWGTEADADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFILDPDGYSIEVLSADQM 864
            A  A  +G+ D      C+EPD +TKDF+ QQTMLR+KDPK+SLDFYTRVLGM L+Q+  F   +FS+YF+GY  +NDIP D KERT W F +   +ELTHNWGTE D +  YHSGN DPRGFGHIGI VPDVYKAC+RFE+ GVKF K PD G MKGLAF+ DPDGY IE+L+ + M
Sbjct:    7 AAPAEVRGLSDEAAYGACSEPDASTKDFLFQQTMLRVKDPKKSLDFYTRVLGMTLLQKFDFPTMKFSLYFLGYEDKNDIPKDDKERTAWTFSRKATLELTHNWGTENDENQSYHSGNSDPRGFGHIGIAVPDVYKACKRFEELGVKFVKKPDDGKMKGLAFVQDPDGYWIEILNPNHM 184
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BLAST of mRNA_S-dermatodea_contig1282.1723.1 vs. uniprot
Match: A0A6S7INW1_PARCT (Lactoylglutathione lyase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7INW1_PARCT)

HSP 1 Score: 241 bits (615), Expect = 7.110e-70
Identity = 113/174 (64.94%), Postives = 133/174 (76.44%), Query Frame = 1 
Query:  349 IAYTQGIDDSICNEPDHATKDFIMQQTMLRIKDPKRSLDFYTRVLGMRLMQELHFSEWEFSIYFVGYCGENDIPSDPKERTRWCFQQAGAVELTHNWGTEADADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFILDPDGYSIEVLSADQMAK 870
            +A ++    S  +EPD +TKDFIMQQTMLRIKDPK SLDFYTRVLGMRL+ +  F   EFS+YFVGY    DIP +   RT+WCF + G +ELTHNWGTE DA+  YH+GN +P+GFGHIGI VPDV KACERFEK GVKF K P+ G MKGLAFI DPDGY IEVL++D + K
Sbjct:    1 MALSEAELKSSIHEPDVSTKDFIMQQTMLRIKDPKISLDFYTRVLGMRLLGKYDFPGMEFSLYFVGYEKAEDIPDEKDARTKWCFSRRGTIELTHNWGTENDANFNYHNGNSEPKGFGHIGIEVPDVDKACERFEKLGVKFVKKPNDGKMKGLAFIQDPDGYWIEVLNSDNLIK 174
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BLAST of mRNA_S-dermatodea_contig1282.1723.1 vs. uniprot
Match: A0A8K0KI60_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KI60_LADFU)

HSP 1 Score: 240 bits (612), Expect = 2.030e-69
Identity = 105/175 (60.00%), Postives = 135/175 (77.14%), Query Frame = 1 
Query:  346 QIAYTQGIDDSICNEPDHATKDFIMQQTMLRIKDPKRSLDFYTRVLGMRLMQELHFSEWEFSIYFVGYCGENDIPSDPKERTRWCFQQAGAVELTHNWGTEADADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFILDPDGYSIEVLSADQMAK 870
            Q+  T     + C++PD +TKDF+ QQTM RIKDP++SLDFYTRVLGM L+Q+L F   +FSIYF+G+  + DIP+DPKE+  W   +   +ELTHNWGTE+D D KYH+GN DPRG+GHIGI VPDVY+ACERFEK GV+F K PD G MKG+AFI DPDGY IE+ +A ++++
Sbjct:    4 QVGLTNAEAKACCSDPDPSTKDFLFQQTMYRIKDPRKSLDFYTRVLGMTLIQKLDFPSMKFSIYFMGFENKADIPADPKEQVVWALSRKATLELTHNWGTESDPDAKYHNGNSDPRGYGHIGIMVPDVYQACERFEKLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFNASKISE 178
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BLAST of mRNA_S-dermatodea_contig1282.1723.1 vs. uniprot
Match: F6ZE91_CIOIN (Lactoylglutathione lyase n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F6ZE91_CIOIN)

HSP 1 Score: 239 bits (611), Expect = 2.780e-69
Identity = 107/161 (66.46%), Postives = 127/161 (78.88%), Query Frame = 1 
Query:  388 EPDHATKDFIMQQTMLRIKDPKRSLDFYTRVLGMRLMQELHFSEWEFSIYFVGYCGENDIPSDPKERTRWCFQQAGAVELTHNWGTEADADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFILDPDGYSIEVLSADQMAK 870
            E D  TKDFIMQQTMLR+KDPK+SL FY+ VLGMRL+ +LHF   +FS+YF+GY    DIP DP ER  W F+Q G +ELTHNWG+E D  + YH+GN DPRGFGHIG++VPDVY ACERF+K GV++ K PD G+MKGLAFI DPDGY IEVLS +QM K
Sbjct:   18 EADVLTKDFIMQQTMLRVKDPKKSLKFYSEVLGMRLLLQLHFDAMKFSLYFMGYADAKDIPDDPTERKTWVFRQPGTIELTHNWGSENDDSVVYHNGNADPRGFGHIGVSVPDVYTACERFDKYGVEYVKKPDAGSMKGLAFIKDPDGYWIEVLSTNQMVK 178
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BLAST of mRNA_S-dermatodea_contig1282.1723.1 vs. uniprot
Match: LGUL_RAT (Lactoylglutathione lyase n=49 Tax=Tetrapoda TaxID=32523 RepID=LGUL_RAT)

HSP 1 Score: 239 bits (610), Expect = 4.360e-69
Identity = 106/164 (64.63%), Postives = 130/164 (79.27%), Query Frame = 1 
Query:  376 SICNEPDHATKDFIMQQTMLRIKDPKRSLDFYTRVLGMRLMQELHFSEWEFSIYFVGYCGENDIPSDPKERTRWCFQQAGAVELTHNWGTEADADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFILDPDGYSIEVLSADQMA 867
            S C++PD +TKDF++QQTMLRIKDPK+SLDFYTRVLG+ L+Q+L F   +FS+YF+ Y  +NDIP D  ERT W F +   +ELTHNWGTE D    YH+GN DPRGFGHIGI VPDVY+AC+RFE+ GVKF K PD G MKGLAF+ DPDGY IE+L+ ++MA
Sbjct:   18 SCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVKKPDDGKMKGLAFVQDPDGYWIEILNPNKMA 181
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BLAST of mRNA_S-dermatodea_contig1282.1723.1 vs. uniprot
Match: UPI001B88A26C (lactoylglutathione lyase-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88A26C)

HSP 1 Score: 238 bits (608), Expect = 6.060e-69
Identity = 107/174 (61.49%), Postives = 133/174 (76.44%), Query Frame = 1 
Query:  349 IAYTQGIDDSICNEPDHATKDFIMQQTMLRIKDPKRSLDFYTRVLGMRLMQELHFSEWEFSIYFVGYCGENDIPSDPKERTRWCFQQAGAVELTHNWGTEADADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFILDPDGYSIEVLSADQMAK 870
            +A ++      C EPD +TKDFI QQTM+R+KDPK+SL+FYT VLGMRL++ +     +F++YF+GY    +IP+D  E+T +CF Q   +ELTHNWGTE D D KYH+GN DPRGFGHIGI+VPDVY+ACERFEK GV F KTPDGG MKGLAFI DPDGY +E+LS + M K
Sbjct:    1 MALSEKDVQDACKEPDTSTKDFIFQQTMIRVKDPKKSLEFYTGVLGMRLLKRIDMPSMKFTVYFIGYDQPENIPTDENEKTIYCFMQKATLELTHNWGTETD-DSKYHNGNSDPRGFGHIGISVPDVYEACERFEKLGVPFIKTPDGGKMKGLAFIQDPDGYWVEILSPNNMVK 173
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BLAST of mRNA_S-dermatodea_contig1282.1723.1 vs. uniprot
Match: UPI0003F0CC16 (lactoylglutathione lyase n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0CC16)

HSP 1 Score: 238 bits (608), Expect = 8.760e-69
Identity = 107/163 (65.64%), Postives = 127/163 (77.91%), Query Frame = 1 
Query:  376 SICNEPDHATKDFIMQQTMLRIKDPKRSLDFYTRVLGMRLMQELHFSEWEFSIYFVGYCGENDIPSDPKERTRWCFQQAGAVELTHNWGTEADADLKYHSGNEDPRGFGHIGITVPDVYKACERFEKEGVKFRKTPDGGNMKGLAFILDPDGYSIEVLSADQM 864
            S C++PD +TKDF+MQQTMLRIKDPK+SLDFYTR+LGM L+Q+L F   +FS+YF+GY  +NDIP D  E+  W F +   +ELTHNWGTE DA   YH+GN DPRGFGHIGI VPDVY AC+RFE  GVKF K PD G MKGLAFI DPDGY IE+L+ + M
Sbjct:   18 SCCSDPDPSTKDFLMQQTMLRIKDPKKSLDFYTRILGMTLLQKLDFPTMKFSLYFLGYEDKNDIPKDGNEKIAWMFSRKATIELTHNWGTEDDATQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEDLGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNGM 180
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1282.1723.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK52_ECTSI1.100e-11086.77Lactoylglutathione lyase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KMV4_9PHAE2.010e-9187.50Lactoylglutathione lyase n=1 Tax=Ectocarpus sp. CC... [more]
UPI001E1D4D5D4.480e-7469.28lactoylglutathione lyase-like n=1 Tax=Mercenaria m... [more]
A0A7L0FFD8_CORCN5.970e-7162.92Lactoylglutathione lyase (Fragment) n=3 Tax=Neogna... [more]
A0A6S7INW1_PARCT7.110e-7064.94Lactoylglutathione lyase n=1 Tax=Paramuricea clava... [more]
A0A8K0KI60_LADFU2.030e-6960.00Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
F6ZE91_CIOIN2.780e-6966.46Lactoylglutathione lyase n=2 Tax=Ciona intestinali... [more]
LGUL_RAT4.360e-6964.63Lactoylglutathione lyase n=49 Tax=Tetrapoda TaxID=... [more]
UPI001B88A26C6.060e-6961.49lactoylglutathione lyase-like n=1 Tax=Gigantopelta... [more]
UPI0003F0CC168.760e-6965.64lactoylglutathione lyase n=1 Tax=Elephantulus edwa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1282contigS-dermatodea_contig1282:47..6574 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score321.2
Seed ortholog evalue2.7e-85
Seed eggNOG ortholog2880.D8LK52
Preferred nameGLO1
KEGG rclassRC00004,RC00740
KEGG koko:K01759,ko:K16803,ko:K21768
KEGG ReactionR02530
KEGG Pathwayko00620,map00620
GOsGO:0001101,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006081,GO:0006082,GO:0006089,GO:0006090,GO:0006355,GO:0006357,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009414,GO:0009415,GO:0009438,GO:0009628,GO:0009636,GO:0009651,GO:0009889,GO:0009987,GO:0010035,GO:0010468,GO:0010556,GO:0010941,GO:0016020,GO:0016829,GO:0016846,GO:0019219,GO:0019222,GO:0019243,GO:0019752,GO:0019904,GO:0030097,GO:0030099,GO:0030154,GO:0030316,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0032787,GO:0033554,GO:0034641,GO:0042180,GO:0042182,GO:0042221,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051186,GO:0051252,GO:0051596,GO:0051716,GO:0060255,GO:0060548,GO:0061727,GO:0065007,GO:0070887,GO:0071214,GO:0071470,GO:0071704,GO:0071944,GO:0080090,GO:0097237,GO:0098754,GO:0104004,GO:1901564,GO:1901575,GO:1901615,GO:1901700,GO:1903506,GO:1990748,GO:2000112,GO:2001141
EggNOG free text desc.lactoylglutathione lyase activity
EggNOG OGsCOG0346@1,KOG2944@2759
EC4.4.1.5
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko04812
Hectar predicted targeting categoryother localisation
Exons8
Model size3591
Cds size492
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1282.1723.1prot_S-dermatodea_contig1282.1723.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig1282 464..2175 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924263.379695-UTR-S-dermatodea_contig1282:46..4631622924263.379695-UTR-S-dermatodea_contig1282:46..463Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1282 47..463 +
1694079134.6045806-UTR-S-dermatodea_contig1282:46..4631694079134.6045806-UTR-S-dermatodea_contig1282:46..463Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1282 47..463 +
1622924263.4361265-UTR-S-dermatodea_contig1282:2175..42981622924263.4361265-UTR-S-dermatodea_contig1282:2175..4298Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1282 2176..4298 +
1694079134.6834555-UTR-S-dermatodea_contig1282:2175..42981694079134.6834555-UTR-S-dermatodea_contig1282:2175..4298Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1282 2176..4298 +
1622924263.4485273-UTR-S-dermatodea_contig1282:4708..48601622924263.4485273-UTR-S-dermatodea_contig1282:4708..4860Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1282 4709..4860 +
1694079134.693305-UTR-S-dermatodea_contig1282:4708..48601694079134.693305-UTR-S-dermatodea_contig1282:4708..4860Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1282 4709..4860 +
1622924263.4609692-UTR-S-dermatodea_contig1282:5421..55221622924263.4609692-UTR-S-dermatodea_contig1282:5421..5522Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1282 5422..5522 +
1694079134.705958-UTR-S-dermatodea_contig1282:5421..55221694079134.705958-UTR-S-dermatodea_contig1282:5421..5522Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1282 5422..5522 +
1622924263.469189-UTR-S-dermatodea_contig1282:6268..65741622924263.469189-UTR-S-dermatodea_contig1282:6268..6574Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1282 6269..6574 +
1694079134.7159097-UTR-S-dermatodea_contig1282:6268..65741694079134.7159097-UTR-S-dermatodea_contig1282:6268..6574Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig1282 6269..6574 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924263.3886588-CDS-S-dermatodea_contig1282:463..4831622924263.3886588-CDS-S-dermatodea_contig1282:463..483Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1282 464..483 +
1694079134.6167004-CDS-S-dermatodea_contig1282:463..4831694079134.6167004-CDS-S-dermatodea_contig1282:463..483Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1282 464..483 +
1622924263.396361-CDS-S-dermatodea_contig1282:769..8231622924263.396361-CDS-S-dermatodea_contig1282:769..823Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1282 770..823 +
1694079134.6279695-CDS-S-dermatodea_contig1282:769..8231694079134.6279695-CDS-S-dermatodea_contig1282:769..823Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1282 770..823 +
1622924263.4044368-CDS-S-dermatodea_contig1282:1086..12041622924263.4044368-CDS-S-dermatodea_contig1282:1086..1204Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1282 1087..1204 +
1694079134.6374035-CDS-S-dermatodea_contig1282:1086..12041694079134.6374035-CDS-S-dermatodea_contig1282:1086..1204Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1282 1087..1204 +
1622924263.4130826-CDS-S-dermatodea_contig1282:1354..15521622924263.4130826-CDS-S-dermatodea_contig1282:1354..1552Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1282 1355..1552 +
1694079134.6512876-CDS-S-dermatodea_contig1282:1354..15521694079134.6512876-CDS-S-dermatodea_contig1282:1354..1552Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1282 1355..1552 +
1622924263.424621-CDS-S-dermatodea_contig1282:2073..21751622924263.424621-CDS-S-dermatodea_contig1282:2073..2175Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1282 2074..2175 +
1694079134.671995-CDS-S-dermatodea_contig1282:2073..21751694079134.671995-CDS-S-dermatodea_contig1282:2073..2175Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig1282 2074..2175 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig1282.1723.1

>prot_S-dermatodea_contig1282.1723.1 ID=prot_S-dermatodea_contig1282.1723.1|Name=mRNA_S-dermatodea_contig1282.1723.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=164bp
MQQTMLRIKDPKRSLDFYTRVLGMRLMQELHFSEWEFSIYFVGYCGENDI
PSDPKERTRWCFQQAGAVELTHNWGTEADADLKYHSGNEDPRGFGHIGIT
VPDVYKACERFEKEGVKFRKTPDGGNMKGLAFILDPDGYSIEVLSADQMA
KDFSQYTPGGLST*
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mRNA from alignment at S-dermatodea_contig1282:47..6574+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig1282.1723.1 ID=mRNA_S-dermatodea_contig1282.1723.1|Name=mRNA_S-dermatodea_contig1282.1723.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=6528bp|location=Sequence derived from alignment at S-dermatodea_contig1282:47..6574+ (Saccorhiza dermatodea SderLu1190fm monoicous)
CTTGTGGCAAATTTGGACCTGTTAACTACCACTATGGTATGCAGTATGGT
CCTCCGTAATAGTAGGTATGTGTATGTGTGTGTATGCCCACGGTTGTGGA
CGTCGTCGTGCTGCTGACCCTTCGGGGAAATGGGCACAATGATGTATGCA
CACACGTGCTCATGGTTATTACCAGTACGGGGCGCGTCTATTGTCAAGCC
AAGGCACGATACTGCTGGCTGTCGTAGTAAGGGAACCCGCCAACCCCATG
AAGTCTCAAGACCTGCACGAGCAATTTGGCCAGAAAAGGTAACCACGCAG
GGAGAGAACGCCAAGTGTTGCATGGGCAGCTAACGCTTTGACGCCCAAAT
TGCGTATACCCAGGGCATTGATGACTCCATCTGCAACGAACCGGATCATG
CAACAAAGGATTTCATAATGCAGCAGACCATGCTGAGGTGAGACGCCAGG
TTCGAGGTTATGCTGCACAGGATTCAATGTTGAGAAAAAACAAACGCCTG
GGCGTGGCAGTTTGGTTTTGCCAGCTTGCACAGCAGCGTCGAGAGGGCGC
GTAGGTGTGGTGCTGCCGGTGCGCATGTTTACTATTTGCTGTACCTGGTC
GCATGGATACTTGTACACGTAAATATATGATACTGCCAGCTGATACCACC
GAGATACAGACAGTATAACTATTTATAGTTCAGAACGCCTGGACTAACAC
ATCACACGCCCTCTCATTGTCAGGATCAAGGATCCGAAGAGGAGTTTGGA
TTTCTACACGCGGGTCCTCGGCATGAGGTGGGGACTATGAATGTAAAACT
CCCTAAGAGTGGCAGCAAAGTCACACGCGCGGAATGTATGCAGCAGGCGA
GCACTTTTGTCGATGAACGGGCTCAAAATAAAACGTTTCGTGATACTGCT
GCAGATCTCTACATCAAATATAATATACCCGAGCCATGTATTTAGCTTCC
AAGCCATTTGAAGTGCGAACAGCAGCCGTGCCGCCTGACTCTGCTTCTTT
TGTGTCGCGCTCTAATGCACCCCCGCATTGATTCGTGAAGGTTGATGCAA
GAGCTTCACTTTTCTGAGTGGGAGTTCAGTATATATTTCGTCGGGTACTG
CGGAGAGAACGACATCCCGTCCGACCCGAAGGAAAGGACTCGGTGGTGCT
TCCAACAGGTGCGGTGCTTTTGGCTAGTTAGCATCCCTTGCTGGTACGCG
GAAGCGCTGTGGAGCCATTACCGGCAAGACAGAAATCTCAAGCTCACAAG
CGATGTTTATGATCTGCGTGTCGGGGTCTCCTCTTCATGACACCTCTCAA
CACGCCAGGCTGGAGCTGTGGAGCTGACACACAACTGGGGCACGGAAGCG
GATGCTGACCTCAAGTACCACAGCGGCAACGAGGATCCGCGAGGATTTGG
CCACATTGGTATCACCGTGCCGGACGTGTACAAGGCGTGCGAGAGGTTCG
AGAAAGAGGGCGTGAAATTCCGCAAAACCCCCGACGGAGGCAACATGAAA
GGGCTGGTACGTGATGACTCCACGTGGTCGCAAAAGTGGCGTTGCGTCGT
GATTACTGAAATGGGTGTTTGCATTTCGATGGTCCACGGGTCTATCCAAA
GGAAACGCCTTCTTCGAGTTCCCACAAATTTGCAGTACCCGGCTCAGTGT
GCCTGATTGTGAAGGGGACCTGGTTCGGTCTACTTGATTCTCTCATATTC
TTAGACCACTCACTTGACATGATGCTAATACTCGATCTGGGCTTGCGTAG
GAAGTAAGGCCATCATATGATATTTAAGAAAATCACGATTTGACAGGCAG
CCGAGGCTTCCCCAGGATGGATGGCGTATATCGTACTTTAGAATCAGCAC
TTCTTGGTCGTGAGTTTACGTCTTTCGCAGGTGAAAACAATGCGCATTTT
TTTGTTCTCGTATTGGGTTCGTGCTTGTCCGGACAGCTGTTTTTGGATAC
TCTAGACGCATGCCTGTCTGCCACGTGGATGCCATCGGAATCACTCTCAC
GCCGCCTCCCGCCGCACCGTCAACCAGGCGTTCATCTTGGATCCAGACGG
CTATTCCATAGAGGTTCTATCCGCAGATCAGATGGCGAAGGATTTCTCCC
AGTACACGCCAGGGGGATTATCGACTTGACCGTCTTCTACGTGAAAGTTG
GTAGAAGACCTATCGGATGTTGTGGTACTGGATCTTCAAAAGCGGACGTC
AGTTGGTGCATACCAATCGTTCAGGGTGGTGTGATCCTTGTACTACAGTA
TGTCGACGGTGCGAATCCGACTTCGAAAAGCACGGGCCAACGTGGTAAAA
GAGGTCCATCATGGTTAGGATCCCCTCACGTTTGGATGGCGTCATTTGTG
TTTTTGCCAGCGGTGCTCTTTTTGTGTTTTTGCCTATGTCATACTATGTC
ATACAGTGAAAATATGTGGTGGCTATTTACGATGAACCCTTCTCTCATTT
AGTCCATTTTCGGGGCCATCGGCCCGCACGATATTTCATATCGAGCAATA
ACCGAACGGTGGCTGCTCTTCTCCGTATCAGATGTATGTGGTGGCGACAG
AAAAGTGGCGATAAACTCTGCCAGGCTTAGCCGACGCTCTCGCACCGTGC
ACTTCCCCTAAACCGTCTCTCCTGCCCGAAGGGTGTTCCGTTCCCGGTGT
CTCTTCTGTGCAATACTATTTTTAAAACGTCTACTTGCTCTACCGGGTAA
AACTTTCTCTGCGCGCGGACGTGCTGTGGACCACTTGCAGACAAAGACCA
ACGCATGCACACACCAGGTGGACTCGTACGTGTTGGCGTGACAGCAATGT
ACCGTTCTCGTAATCCCTACTATTACAATGACTACTTGTATTCGTCGAAA
AATGGATTGAGTCCAAAAACGGTTAATACAAAATTTAAAGTCGTCCAAGC
TGTGTGCTTCAATCACATCATCATGTTCGTGTTTGCCAGGCCCTTGAACT
TGTAGGAGCAGCTTCTTGCTACGTTCTAACAGGGGTGCCCTCCGTCAAGC
CTCCTCGGAACCAACTTTGGCTACTAGGTAGCATGGCCGCATTCAAATGC
TGGAAATAGACATCATCCACGGCTGCCTGAATACGTCGAGCCGCCGCAAC
AAGAAACACGCACCGATACTATGATAATAATACGTTGTCACAGGTGCACC
CAAGTCTTGCACGAATACAAAAACATAAATTTCCCCCTAATACCTTCCCG
CTGTGCTAGAAAGACAGTTCGCCGCCGTCGGGGATGCACCAAACTACAGG
CTTCATGCGTGTGTCCACTACTTCCAGTGTTCGCTATGCCGCGACAGTAC
TATGTATCCTGTCCGCACACCGCGCGAGGATGGGAATGGCCGAACGTACT
TCACTGTAAAACATCTCTCTCGAAAAATGCCTCTCCCACAAAACCAAACG
TCACCTTGCACAAACTGTGCTGGCTGACATTTCACTGTGACGAACATGTC
ACCGCATGTACACCAATAAAGGCCACGGTCGTTTCACACAGAACAACTGA
TGTATCCCTTCGACAGTAGCGAAACTCGTTCAACTCATCCCCACAAAAGT
CGGCCGCTTCTGACCCCGCACTTGGCCAGGGGGGATTTGCTTTGGAATAA
CGAATAACCCCTACGCGGTCTGCCGCCAAAAGACTAATATATGCATACTC
CAACAAGACAACAAGATCTCCACGACAAGTAAAGGGCACGCCAACCTCTG
CTTGCTCCACATTGGCGACGGCGGCCGAGCTATCGTGTCACGTATTCAAT
TCTGGGGTGACCTTTGCTGCCTCTGGCTTCGCTTCGCTGTCGTGTTCCGA
CGCCGGCACTTTCACGTCCTCTCCTAAATTCGTCTGTCCCATCTTTTCTG
CGATCAAATATTTTACATCCGTACCGCTAGGAGAGCACCCTGCCTCGTTG
CCAGGTGGTCCGACAGCCGGGGAGCTCTCTGAAGCCGATGGTTGCTCTTC
GACGGCGTTTGCCTTAGCATCACCGCCAGGTGTCCAAGCAGGTGCTGTCG
GTGTCAACTCCGTCTTGCCATCAACCAGCGCGCCGTTCTCACTTGCCGGC
CCTGCCTCTGTTGTGTCCTCGGCGACTGCCTCCGCGGACGCTGTGGTCGT
CTCTGCCGAATCCTCTTTGGCAGGAGGAACCGCGTCGTCCTGTGGCGCTA
ACGCGTTTGTTTCGTCCGCCTTGGGTGCTCCTTCGGTCTCTGCTTTACCG
TCCCCGGTACCCTCGCTTCGTTGTTGCGTACTCTGCGAAGTCTGCGCGTC
ATGTCCAGCAGCAACACGGGCGTGGCGTTAGGTTGCGTGTGTAAGGTATA
CCGTGGAAACACGCTAAGCCCAGCACGTTATGTACCAAGAACAGGTTAGT
ATGACAACATTTTCAGGAACAGGGCAGGAGAGGGGAACCAAATTTTGTAT
GGCACGCTGAGGGCACGCCCGCACCCGCGATCCAACGGTATTGAAACCTT
CCTTGAGGAGGCGCCTTCCCCAGGCATGCTTGGCAATTCAAGTACTTTCA
GCGTGACACTGCTCTGTAGACACTCGTTAACATGGCTCGAAGAGAAACGT
GTCACTGTAGTTCCACAGGGATCAGCACATCAGCACACAACCGCCATGCG
GGACATGGACCCTGGACGACATATTTACGTTACAGTGGAGAGTGCCCCGA
CCTGCTCTAGAGCTCCGTCAAATGTTGCAGCGGCAGGATCTTCGGAAACT
GCAGCAGGGTCGACCTTGATATACCGTGGCACCCCTTGTTTTCCAGTAGC
TTGATTCGGGAGAAGCCACACCTCCCATCCCTCCTTCATGCGCATCGTTT
CGTTCTCGGTATCGACCTGTTCGCATCGAATCGAAACACCACGGTCGTGC
ACACGGTATTTGAAGTTGAACGCTGCGCTGCCAGGCATGCAACAGGTATG
GCCTGCGCAACATCCTACACGAGTGAGCCGTCAACCACGCGGGTGAGGTC
CATGTACACACACCTCAATCATGGCGCAAGCGGACCCTTAAGTCTAAAAT
CGTCAATATAGACAGCCGTGCGGCCGTAGGGGTATTTTCATTTTTCGAAT
ACCCTACAGGAACATGTTGACCCCATCAATCCCTCATCAACCAACTGCCC
TTCTTACAAACTAGTGGGTAGCCACGGCTACGCCCGTGTGAGGTGTGCGT
TGGCAGGACGATATGATTACGGAAGGCGACACGGAGGTCGCACGCGGTCG
AGCTACTGTACGTGTCGCTGCTGTGTTTTCGCTTTTTTTAGTTAAAAAAA
AAACGCTCAAGACAAAGATCAAGTTGTTTGGCATCAGACAGCCTCCTTGT
CTAAAATCAATATACACAATCGGTCATTGCTGCATTCATTAATAAGATGT
CATTTTTCAACCATCAAAACAGCAAACCTGTAACATGTCGCTCGCTAGAA
TGCCCGCCGAGATATCCTGCAGATCCACTCCAAACCGCGCCACCCCAGGA
AAGTTTGCGACGAACGCGATGGGGATGTATCCCTGTAGAAAACGGAATGT
GGAATTTTCATATTTAATGCGATACGGCAAGAGTACCAGACCGCAACAGA
TAGCGGCATCAGTTGGTCGAGTAGCGTGGCTAGCATAACATCGAGCGTCC
GATCGATGCAGGCGATTATGGTGGTAGGCGCAACAACGTACTCCACTGCG
TCTATCGAACTCCTTCGCCTATCGTTCCATTGACACCAAGTGCCCGTGTC
GTTAGGGAGTGGATCTGCTTGCTATATTGGCACTGGGGTTGTTGTCATAC
CGTTGCAAAATGTCACGTGTCGCATGTCAACATACAACTACACGTAGAAA
CCAAAAGCAGAAGCGTCCTGGTACGCGATAGCACACGGGCACATGCGGAT
CACGATGTGCTACCAGGCTTTCCAACGGCCACGGCGTGAGGAATGCACGC
ATGGTGGAACGCGTGCGTGGAGCGCATGAAGCGATTTGAGGCGCTCCTGG
CTCCTGGGTGGGTAACCATCCAAAACCTCAACCTGGTGAATAAGGTACAG
CAGGAGTGTTTTGCTTAACAAGCATACCTTTGCACATACACATAACGGTA
GCACGATCTCACGATACACTGGCGTTCGAAGCCAATATCTATACCTAAGC
CCGTTCTTCACATCCAGAGAGCGACGTGGACCCGGGCTACTGTTGATAGT
GCGGACCTTAGACGCTGAGAGGGGGGGGTTGTGTGGTTGAACGGCGTACC
GGCGCAAGCGGTTCAGAAACAGCCATCACCTCCTCGTCCATGTAGGACCG
CATGAAGATGTCTCGACAAAGATTCTCCACGGTGAAGTAAAACTCAATCT
GCCTGACCGCCAAGTTGGTCATGTATGACCTCTGCTCCTCGAAGTTCGGT
TCGTTGAAGTTTTGAGGGCTGGGGTAGTACGTTGCCCCCACGTAACCTCC
TCCTCCTCCTCCTCCTCCTCCGCTGCCGCCGTATGCATAGCCTCTCCCTC
GTCCCTGGCCTTGGTTGTGCCTCGTGCCTCCACTTCCTCCACCCCCTCCC
CCTCGTCGGTTACCACGGTGTCCACCTG
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Coding sequence (CDS) from alignment at S-dermatodea_contig1282:47..6574+

>mRNA_S-dermatodea_contig1282.1723.1 ID=mRNA_S-dermatodea_contig1282.1723.1|Name=mRNA_S-dermatodea_contig1282.1723.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at S-dermatodea_contig1282:47..6574+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCAGCAGACCATGCTGAGATGCAGCAGACCATGCTGAGGATCAAGGAT
CCGAAGAGGAGTTTGGATTTCTACACGCGGGTCCTCGGCATGAGGATCAA
GGATCCGAAGAGGAGTTTGGATTTCTACACGCGGGTCCTCGGCATGAGGT
TGATGCAAGAGCTTCACTTTTCTGAGTGGGAGTTCAGTATATATTTCGTC
GGGTACTGCGGAGAGAACGACATCCCGTCCGACCCGAAGGAAAGGACTCG
GTGGTGCTTCCAACAGGTTGATGCAAGAGCTTCACTTTTCTGAGTGGGAG
TTCAGTATATATTTCGTCGGGTACTGCGGAGAGAACGACATCCCGTCCGA
CCCGAAGGAAAGGACTCGGTGGTGCTTCCAACAGGCTGGAGCTGTGGAGC
TGACACACAACTGGGGCACGGAAGCGGATGCTGACCTCAAGTACCACAGC
GGCAACGAGGATCCGCGAGGATTTGGCCACATTGGTATCACCGTGCCGGA
CGTGTACAAGGCGTGCGAGAGGTTCGAGAAAGAGGGCGTGAAATTCCGCA
AAACCCCCGACGGAGGCAACATGAAAGGGCTGGCTGGAGCTGTGGAGCTG
ACACACAACTGGGGCACGGAAGCGGATGCTGACCTCAAGTACCACAGCGG
CAACGAGGATCCGCGAGGATTTGGCCACATTGGTATCACCGTGCCGGACG
TGTACAAGGCGTGCGAGAGGTTCGAGAAAGAGGGCGTGAAATTCCGCAAA
ACCCCCGACGGAGGCAACATGAAAGGGCTGGCGTTCATCTTGGATCCAGA
CGGCTATTCCATAGAGGTTCTATCCGCAGATCAGATGGCGAAGGATTTCT
CCCAGTACACGCCAGGGGGATTATCGACTTGAGCGTTCATCTTGGATCCA
GACGGCTATTCCATAGAGGTTCTATCCGCAGATCAGATGGCGAAGGATTT
CTCCCAGTACACGCCAGGGGGATTATCGACTTGA
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