prot_S-dermatodea_contig912.17195.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig912.17195.1
Unique Nameprot_S-dermatodea_contig912.17195.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length924
Homology
BLAST of mRNA_S-dermatodea_contig912.17195.1 vs. uniprot
Match: D7FNF4_ECTSI (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNF4_ECTSI)

HSP 1 Score: 848 bits (2190), Expect = 1.690e-294
Identity = 543/921 (58.96%), Postives = 616/921 (66.88%), Query Frame = 0
Query:    2 PSLSSGALLALALLAAAIPSDAVKWPFKPPAPPWARALRSRVKVSFDDESLSFWDPFKNTAFNASATITPIAADIGRRAPGYVAYATLATGLGLFLPPKGMIAVNIAYVAAAVARSHEG-VETFCKDEGRVLLGCPSLHLALVGSALRALRFRVWRGLFVRATLFRLRYQLRFMRIYQPQWVTKGASPLGRIMQDTAHAARSVQGLFPDLCHQAALAAGGCRLPYWSDCRPPPRVEKGWIVNRRLDRRLKREFGTRARRVRPGDDYPLGLGLLGWRIPHRVLLGAARVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAEEGARLIAVLEQDTEQEEGVVLEVYEETVDENAGSTEDAQSESSQQETPGSWNAEAAAAAVGAVPTEGPLVRFHNVTAIPSRGSTLTKSYRALAELPYGDGRSAADDAAKTKSAPAWAAPDPYDKPQAGASGVG-----------VAAPVSPTRQPLA----------LQPVVIKRNLGRQLLLAEDDVTAARKVLRRMAFKAEIDLDLSGVLAEVVAAVARAKNLRYEAENIDRIRQNLKRAGMLGSAVGVPEVLSCPELGPLARRGIVVTTALRGVDVSDVYLMEHAAARGGKERDRFVDGVFAVFGQMCLADGCFPSNPMPENLLYMYSGQVGLTDLSSVTQLTEDQRRALCRLYRTMAELRGEDATSPSAAAELKARAAMEGVGLVIDLPPAGGIAWVSSDSAEDWTTEEAATAAVASAAESIIDATLGDEPXXXXXXXXXXXXXTV--------------EGRQEGTLEERNAGEXXXXXXXXXXXXXXXXXEELPEPTPPLAPRAPVTHLMLLRALFDTQQDEALDVVGGGGGRFLRSMAVRRLPQAMAPVLRMVANLRGVCAHLDVDKSLLPRFSRAASKGLSWRLALASSRG 886
            P L+  A LAL LLA A   DA KW F   AP    A + RVKVSFDDES SFWDPFKN  FN +  + PIA ++GRRAPGY AYA  +T LGLFLPPK M AVN+AYVAAAVARSHEG VETFC+DEGR+LLG PSLHLA  G+ALRA RFR WR LFVRATLFRLRYQLRFMRIY+P+WV +G SPLG I+QDTA AARSVQGL PDLC QAA  AGGCRL YWS+C PPPRVEKGW V RR+DRRL+RE G RA+R RP     +G+GLLGWRIPHRV+LG  R                                +  +G+    V+E+  E+   V+   Y +     AGS  D   + +++           A     +P EGPLVRFHNVT I SRGSTLT+SYRALAELPYGDG+   D    + S   W A      P  G  G             V A +  T  P A          LQPVVIKRN+ RQL+LAEDD+ AARKVLRR+ F+AEIDLD+SGVLA V AAV+RA +LR EA +I+++R NL +AGMLGS VGVPEVLSCPELG LAR+GI+VTTALRGVDVSD Y+M+HAA  G KER RF+DGVF  FGQMCLADGCFPSNP+PENLLYMYSGQVGLTDLSSVTQL E QRRALCRLY T+A+LR EDA +PS AAELKARAAME VGLVIDLPPAG                                       XXXXXXXXXXXXX                EG  E   E     EXXXXXXXXXXXXXXXXX             AP+T++MLLR LFDT++DEAL +VGGGG   L+ MAVRRLPQAM PVL+MVANLRG+CAHLDVD+S+LPRFS+AASKGLSWR  LASSRG
Sbjct:    3 PPLAHAASLALVLLAKACHVDASKWKFGAQAP----ATKKRVKVSFDDESFSFWDPFKNKGFNLTRAVGPIAEEVGRRAPGYAAYAAASTALGLFLPPKVMTAVNVAYVAAAVARSHEGGVETFCRDEGRLLLGMPSLHLAAAGTALRAARFRFWRRLFVRATLFRLRYQLRFMRIYRPRWVIRGGSPLGLIVQDTADAARSVQGLVPDLCRQAAFIAGGCRLAYWSECNPPPRVEKGWFVLRRVDRRLRRELGPRAQRARP-----VGVGLLGWRIPHRVVLGTLRF----VFRSPAARRENKRISGRAPRLVGAEGHEQGDGSGGGVVVEEVGEEYSTVL---YGDAGALAAGSDRDGVEDGTRRR-----GGRKEALMPEGIPAEGPLVRFHNVTTIASRGSTLTRSYRALAELPYGDGQ--VDPEGDSFSL--WYAKLQRGVPAGGGWGSAGDGGDRDEDEEVLARMESTPTPSAVAAAARKAATLQPVVIKRNVRRQLMLAEDDLAAARKVLRRLTFRAEIDLDMSGVLAAVAAAVSRAADLRTEARSIEKVRSNLFKAGMLGSVVGVPEVLSCPELGALARKGILVTTALRGVDVSDSYVMQHAAPGGEKERGRFLDGVFRAFGQMCLADGCFPSNPLPENLLYMYSGQVGLTDLSSVTQLAESQRRALCRLYHTLADLRREDAVNPSEAAELKARAAMESVGLVIDLPPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGHWEVGAEADEGKEXXXXXXXXXXXXXXXXXXXX---------SAPLTYVMLLRGLFDTRRDEALALVGGGGMELLKGMAVRRLPQAMVPVLKMVANLRGLCAHLDVDESILPRFSQAASKGLSWRKRLASSRG 889          
BLAST of mRNA_S-dermatodea_contig912.17195.1 vs. uniprot
Match: A0A835ZDP2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP2_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.200e-8
Identity = 70/205 (34.15%), Postives = 90/205 (43.90%), Query Frame = 0
Query:   33 PPWARALRSRVKVSFDDESLSFWDPFKNTAFNASATITPIAADIGRRAPGYVAYATLATGLGLFLPPKGMIAVNIAYVAAAVARSHEGVETFCKDEGRVLLG----CPSLHLALVGSALRALRFRVWRGLFVRA--TLFRLRYQLRFMRIYQPQWVTKGASPLGRIMQDTAHAARSVQGLFPDLCHQAALAAGGCRLPY---WSD 228
            PP  R     + VS DD  L FWDP  + A  AS      AA +   AP Y+ +++ + G    LPP    +  +    AA+AR+   V  F    G +LL      P+ HLA   + LR L +R WR   +RA   L  LR  LR      P      A+ L RI+   A     + GL   L   AALAA G  LPY   W D
Sbjct:   45 PPSGRQKPKVMVVSHDDRELHFWDPLSSMA--ASGRNHTHAALVA--APAYLLHSSASIGAKALLPPP-CYSTLVLIRLAALARAANSVSAF----GALLLSELAMSPNTHLAAASALLRVLSYRAWRAAALRAHAALAALRCALRRR---SPLRRRGEAAALRRILSAAAADIVPLDGLAAALAFDAALAAEGAALPYAPAWPD 237          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig912.17195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNF4_ECTSI1.690e-29458.96ABC1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZDP2_9STRA2.200e-834.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 523..543
NoneNo IPR availableCOILSCoilCoilcoord: 764..785
NoneNo IPR availablePANTHERPTHR43173FAMILY NOT NAMEDcoord: 472..870
NoneNo IPR availablePANTHERPTHR43173:SF12AARF DOMAIN-CONTAINING KINASE 1coord: 472..870
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..923
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.849

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig912contigS-dermatodea_contig912:10535..15797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig912.17195.1mRNA_S-dermatodea_contig912.17195.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig912 10535..16952 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig912.17195.1 ID=prot_S-dermatodea_contig912.17195.1|Name=mRNA_S-dermatodea_contig912.17195.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=924bp
MPSLSSGALLALALLAAAIPSDAVKWPFKPPAPPWARALRSRVKVSFDDE
SLSFWDPFKNTAFNASATITPIAADIGRRAPGYVAYATLATGLGLFLPPK
GMIAVNIAYVAAAVARSHEGVETFCKDEGRVLLGCPSLHLALVGSALRAL
RFRVWRGLFVRATLFRLRYQLRFMRIYQPQWVTKGASPLGRIMQDTAHAA
RSVQGLFPDLCHQAALAAGGCRLPYWSDCRPPPRVEKGWIVNRRLDRRLK
REFGTRARRVRPGDDYPLGLGLLGWRIPHRVLLGAARVGGRLLASPARRS
GSARKRPPRRPRGSRRRRGKAEEGARLIAVLEQDTEQEEGVVLEVYEETV
DENAGSTEDAQSESSQQETPGSWNAEAAAAAVGAVPTEGPLVRFHNVTAI
PSRGSTLTKSYRALAELPYGDGRSAADDAAKTKSAPAWAAPDPYDKPQAG
ASGVGVAAPVSPTRQPLALQPVVIKRNLGRQLLLAEDDVTAARKVLRRMA
FKAEIDLDLSGVLAEVVAAVARAKNLRYEAENIDRIRQNLKRAGMLGSAV
GVPEVLSCPELGPLARRGIVVTTALRGVDVSDVYLMEHAAARGGKERDRF
VDGVFAVFGQMCLADGCFPSNPMPENLLYMYSGQVGLTDLSSVTQLTEDQ
RRALCRLYRTMAELRGEDATSPSAAAELKARAAMEGVGLVIDLPPAGGIA
WVSSDSAEDWTTEEAATAAVASAAESIIDATLGDEPGDDADEKKEEEEAT
VEGRQEGTLEERNAGEAAEEEKEEEREEGKAEKEELPEPTPPLAPRAPVT
HLMLLRALFDTQQDEALDVVGGGGGRFLRSMAVRRLPQAMAPVLRMVANL
RGVCAHLDVDKSLLPRFSRAASKGLSWRLALASSRGGGGERDRRAGMPPG
PPSAVNDAEKPAPASPKAPHEML*
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