prot_S-dermatodea_contig9028.17111.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig9028.17111.1
Unique Name	prot_S-dermatodea_contig9028.17111.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	140

Homology

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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A6H5L2M1_9PHAE (Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2M1_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 2.590e-85
Identity = 130/140 (92.86%), Postives = 135/140 (96.43%), Query Frame = 0

Query:    1 SLRSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 140
            SL+ EADQWRRGTDTMDVWFDSGSSWAGVAKAREEL YPADLYLEGSDQHRGWFQSSLLTSVAANG APYKTVLTHGFVLDEKGYKMSKSLGNT+DP E+IEGGNNKKQKPAYGADVLRLWVSSVDY+GDVCVGD +IKQ
Sbjct:  628 SLQGEADQWRRGTDTMDVWFDSGSSWAGVAKAREELDYPADLYLEGSDQHRGWFQSSLLTSVAANGHAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPTEVIEGGNNKKQKPAYGADVLRLWVSSVDYSGDVCVGDQIIKQ 767

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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A6U6EBV7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6EBV7_9STRA)

HSP 1 Score: 261 bits (667), Expect = 6.600e-82
Identity = 116/138 (84.06%), Postives = 134/138 (97.10%), Query Frame = 0

Query:    3 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 140
            R++A +W++GTDTMDVWFDSGSSWAGVA++R+ELAYPADLYLEGSDQHRGWFQSSLLTSVAA G+APYK VLTHGFVLDEKG+KMSKSLGN VDP+++IEGGNNKKQ+PAYGADVLRLWV+SVDYTGDVC+G+N+IKQ
Sbjct:  146 RADASKWKKGTDTMDVWFDSGSSWAGVARSRDELAYPADLYLEGSDQHRGWFQSSLLTSVAAEGKAPYKAVLTHGFVLDEKGFKMSKSLGNVVDPLKVIEGGNNKKQEPAYGADVLRLWVASVDYTGDVCIGNNIIKQ 283

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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S0BWH6_9STRA (Isoleucyl-tRNA synthetase (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWH6_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.290e-81
Identity = 114/140 (81.43%), Postives = 131/140 (93.57%), Query Frame = 0

Query:    1 SLRSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 140
            S ++EA +W++GTDTMDVWFDSGSSWAGVAK R+ELAYPAD+YLEGSDQHRGWFQSSLLTSVAANGQAPYK VLTHGFVLDEKG+KMSKSLGN + P+ +IEGGNNKKQ+PAYG D LRLWV+SVDY+GDVC+GDN++KQ
Sbjct:   65 SYKAEAHKWKKGTDTMDVWFDSGSSWAGVAKGRDELAYPADVYLEGSDQHRGWFQSSLLTSVAANGQAPYKAVLTHGFVLDEKGFKMSKSLGNVISPMMMIEGGNNKKQQPAYGIDPLRLWVASVDYSGDVCIGDNIMKQ 204

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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S1CY54_CYCTE (Isoleucyl-tRNA synthetase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY54_CYCTE)

HSP 1 Score: 258 bits (658), Expect = 6.960e-81
Identity = 114/138 (82.61%), Postives = 131/138 (94.93%), Query Frame = 0

Query:    3 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 140
            + +AD+W++GTDTMDVWFDSGSSW GVAK R+ELAYPAD+YLEGSDQHRGWFQSSLLTSVAAN QAPYKTVLTHGFVLDEKG+KMSKSLGN +DP+++IEGGNNKK +PAYGADVLRLWV+SVDY+GDVC+G N+IKQ
Sbjct:  121 KDQADKWKKGTDTMDVWFDSGSSWNGVAKTRDELAYPADIYLEGSDQHRGWFQSSLLTSVAANNQAPYKTVLTHGFVLDEKGFKMSKSLGNVIDPMQVIEGGNNKKLEPAYGADVLRLWVASVDYSGDVCIGTNIIKQ 258

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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S2A607_TRICV (Isoleucine--tRNA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A607_TRICV)

HSP 1 Score: 260 bits (665), Expect = 1.640e-80
Identity = 116/138 (84.06%), Postives = 132/138 (95.65%), Query Frame = 0

Query:    3 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 140
            ++EAD+W++GTDTMDVWFDSGSSWAGVAK R ELAYPAD+YLEGSDQHRGWFQSSLLTSVAA G+APYKTVLTHGFVLDEKG+KMSKSLGN VDP+++IEGGNNKK +PAYGADVLRLWV+SVDY+GDVC+G N+IKQ
Sbjct:  280 KNEADKWKKGTDTMDVWFDSGSSWAGVAKGRSELAYPADIYLEGSDQHRGWFQSSLLTSVAAQGKAPYKTVLTHGFVLDEKGFKMSKSLGNVVDPLKVIEGGNNKKAEPAYGADVLRLWVASVDYSGDVCIGQNIIKQ 417

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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S2XLF5_9STRA (Isoleucyl-tRNA synthetase n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLF5_9STRA)

HSP 1 Score: 256 bits (653), Expect = 7.950e-80
Identity = 114/138 (82.61%), Postives = 131/138 (94.93%), Query Frame = 0

Query:    3 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 140
            + EAD+W++GTDTMDVWFDSGSSW GVAK R+ELAYPAD+YLEGSDQHRGWFQSSLLTSVAANG APYKTVLTHGFVLDEKG+KMSKSLGN V+P+++I+GGNNKK +PAYGADVLRLWV+SVDY+GDVC+GD +IKQ
Sbjct:  160 KGEADKWKKGTDTMDVWFDSGSSWNGVAKGRDELAYPADVYLEGSDQHRGWFQSSLLTSVAANGVAPYKTVLTHGFVLDEKGFKMSKSLGNVVNPLKVIDGGNNKKLEPAYGADVLRLWVASVDYSGDVCIGDGIIKQ 297

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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A8J9WZV3_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9WZV3_PHATR)

HSP 1 Score: 254 bits (648), Expect = 8.590e-80
Identity = 114/139 (82.01%), Postives = 131/139 (94.24%), Query Frame = 0

Query:    2 LRSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 140
             R+EAD+W++GTDTMDVWFDSGSSWAGVA++R+ELAYPAD+YLEGSDQHRGWFQSSLLTSVA N  APYKTVLTHGFVLDEKG+KMSKSLGN VDP+++IEGGNNKKQ PAYGADVLRLWV++ DY+GDV +GDN+IKQ
Sbjct:   81 FRAEADKWQKGTDTMDVWFDSGSSWAGVAQSRDELAYPADMYLEGSDQHRGWFQSSLLTSVANNNIAPYKTVLTHGFVLDEKGFKMSKSLGNVVDPLKVIEGGNNKKQDPAYGADVLRLWVANSDYSGDVLIGDNIIKQ 219

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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S1ZYZ0_9STRA (Isoleucine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYZ0_9STRA)

HSP 1 Score: 262 bits (669), Expect = 3.210e-79
Identity = 116/138 (84.06%), Postives = 133/138 (96.38%), Query Frame = 0

Query:    3 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 140
            + EA++W++GTDTMDVWFDSGSSWAGVA AR+EL YPADLYLEGSDQHRGWFQSSLLTSVAA GQAPYKTVLTHGFVLDEKGYKMSKSLGN +DP+++IEGGNNKKQ+PAYGADVLRLWV++VDY+GDVC+G+N+IKQ
Sbjct:  597 KEEAEKWKKGTDTMDVWFDSGSSWAGVASARDELQYPADLYLEGSDQHRGWFQSSLLTSVAAQGQAPYKTVLTHGFVLDEKGYKMSKSLGNVIDPLKVIEGGNNKKQEPAYGADVLRLWVATVDYSGDVCIGNNIIKQ 734

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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S4II32_9STRA (Isoleucine--tRNA ligase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4II32_9STRA)

HSP 1 Score: 261 bits (667), Expect = 4.760e-79
Identity = 116/138 (84.06%), Postives = 134/138 (97.10%), Query Frame = 0

Query:    3 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 140
            R++A +W++GTDTMDVWFDSGSSWAGVA++R+ELAYPADLYLEGSDQHRGWFQSSLLTSVAA G+APYK VLTHGFVLDEKG+KMSKSLGN VDP+++IEGGNNKKQ+PAYGADVLRLWV+SVDYTGDVC+G+N+IKQ
Sbjct:  560 RADASKWKKGTDTMDVWFDSGSSWAGVARSRDELAYPADLYLEGSDQHRGWFQSSLLTSVAAEGKAPYKAVLTHGFVLDEKGFKMSKSLGNVVDPLKVIEGGNNKKQEPAYGADVLRLWVASVDYTGDVCIGNNIIKQ 697

[Close]

BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S1BCM6_9STRA (Isoleucine--tRNA ligase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCM6_9STRA)

HSP 1 Score: 258 bits (659), Expect = 7.490e-78
Identity = 118/137 (86.13%), Postives = 128/137 (93.43%), Query Frame = 0

Query:    4 SEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 140
            +EA +WR+GTDTMDVWFDSGSSWAGV K REELAYPADLYLEGSDQHRGWFQSSLLTSVAA GQAPYKTVLTHGFV+DEKGYKMSKSLGN V P  IIEGGNNKKQ+PAYGADVLRLWV++VDY+ DVC+GDN+IKQ
Sbjct:  590 AEAHKWRKGTDTMDVWFDSGSSWAGVVKTREELAYPADLYLEGSDQHRGWFQSSLLTSVAAEGQAPYKTVLTHGFVMDEKGYKMSKSLGNVVSPALIIEGGNNKKQQPAYGADVLRLWVATVDYSSDVCIGDNIIKQ 726

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L2M1_9PHAE	2.590e-85	92.86	Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6U6EBV7_9STRA	6.600e-82	84.06	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S0BWH6_9STRA	1.290e-81	81.43	Isoleucyl-tRNA synthetase (Fragment) n=1 Tax=Probo...	[more]
A0A7S1CY54_CYCTE	6.960e-81	82.61	Isoleucyl-tRNA synthetase n=1 Tax=Cyclophora tenui...	[more]
A0A7S2A607_TRICV	1.640e-80	84.06	Isoleucine--tRNA ligase n=1 Tax=Trieres chinensis ...	[more]
A0A7S2XLF5_9STRA	7.950e-80	82.61	Isoleucyl-tRNA synthetase n=2 Tax=Attheya septentr...	[more]
A0A8J9WZV3_PHATR	8.590e-80	82.01	Hypothetical protein n=1 Tax=Phaeodactylum tricorn...	[more]
A0A7S1ZYZ0_9STRA	3.210e-79	84.06	Isoleucine--tRNA ligase n=1 Tax=Ditylum brightwell...	[more]
A0A7S4II32_9STRA	4.760e-79	84.06	Isoleucine--tRNA ligase n=2 Tax=Odontella aurita T...	[more]
A0A7S1BCM6_9STRA	7.490e-78	86.13	Isoleucine--tRNA ligase n=1 Tax=Corethron hystrix ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002301	Isoleucine-tRNA ligase	PRINTS	PR00984	TRNASYNTHILE	coord: 45..54 score: 85.0 coord: 11..24 score: 62.24
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 2..131 e-value: 2.7E-46 score: 160.1
IPR002300	Aminoacyl-tRNA synthetase, class Ia	PFAM	PF00133	tRNA-synt_1	coord: 2..131 e-value: 5.9E-42 score: 143.7
None	No IPR available	PANTHER	PTHR42765	FAMILY NOT NAMED	coord: 3..140
None	No IPR available	PANTHER	PTHR42765:SF3		coord: 3..140
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 5..139

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9028	contig	S-dermatodea_contig9028:850..8501 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9028.17111.1	mRNA_S-dermatodea_contig9028.17111.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig9028 850..8501 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig9028.17111.1 ID=prot_S-dermatodea_contig9028.17111.1|Name=mRNA_S-dermatodea_contig9028.17111.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=140bp
SLRSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQH
RGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEI
IEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002301	Ile-tRNA-ligase
IPR014729	Rossmann-like_a/b/a_fold
IPR002300	aa-tRNA-synth_Ia