mRNA_S-dermatodea_contig9028.17111.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig9028.17111.1
Unique NamemRNA_S-dermatodea_contig9028.17111.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A6H5L2M1_9PHAE (Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2M1_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 2.590e-85
Identity = 130/140 (92.86%), Postives = 135/140 (96.43%), Query Frame = 1 
Query:    1 SLRSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 420
            SL+ EADQWRRGTDTMDVWFDSGSSWAGVAKAREEL YPADLYLEGSDQHRGWFQSSLLTSVAANG APYKTVLTHGFVLDEKGYKMSKSLGNT+DP E+IEGGNNKKQKPAYGADVLRLWVSSVDY+GDVCVGD +IKQ
Sbjct:  628 SLQGEADQWRRGTDTMDVWFDSGSSWAGVAKAREELDYPADLYLEGSDQHRGWFQSSLLTSVAANGHAPYKTVLTHGFVLDEKGYKMSKSLGNTLDPTEVIEGGNNKKQKPAYGADVLRLWVSSVDYSGDVCVGDQIIKQ 767
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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A6U6EBV7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6EBV7_9STRA)

HSP 1 Score: 261 bits (667), Expect = 6.600e-82
Identity = 116/138 (84.06%), Postives = 134/138 (97.10%), Query Frame = 1 
Query:    7 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 420
            R++A +W++GTDTMDVWFDSGSSWAGVA++R+ELAYPADLYLEGSDQHRGWFQSSLLTSVAA G+APYK VLTHGFVLDEKG+KMSKSLGN VDP+++IEGGNNKKQ+PAYGADVLRLWV+SVDYTGDVC+G+N+IKQ
Sbjct:  146 RADASKWKKGTDTMDVWFDSGSSWAGVARSRDELAYPADLYLEGSDQHRGWFQSSLLTSVAAEGKAPYKAVLTHGFVLDEKGFKMSKSLGNVVDPLKVIEGGNNKKQEPAYGADVLRLWVASVDYTGDVCIGNNIIKQ 283
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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S0BWH6_9STRA (Isoleucyl-tRNA synthetase (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BWH6_9STRA)

HSP 1 Score: 256 bits (653), Expect = 1.290e-81
Identity = 114/140 (81.43%), Postives = 131/140 (93.57%), Query Frame = 1 
Query:    1 SLRSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 420
            S ++EA +W++GTDTMDVWFDSGSSWAGVAK R+ELAYPAD+YLEGSDQHRGWFQSSLLTSVAANGQAPYK VLTHGFVLDEKG+KMSKSLGN + P+ +IEGGNNKKQ+PAYG D LRLWV+SVDY+GDVC+GDN++KQ
Sbjct:   65 SYKAEAHKWKKGTDTMDVWFDSGSSWAGVAKGRDELAYPADVYLEGSDQHRGWFQSSLLTSVAANGQAPYKAVLTHGFVLDEKGFKMSKSLGNVISPMMMIEGGNNKKQQPAYGIDPLRLWVASVDYSGDVCIGDNIMKQ 204
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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S1CY54_CYCTE (Isoleucyl-tRNA synthetase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CY54_CYCTE)

HSP 1 Score: 258 bits (658), Expect = 6.960e-81
Identity = 114/138 (82.61%), Postives = 131/138 (94.93%), Query Frame = 1 
Query:    7 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 420
            + +AD+W++GTDTMDVWFDSGSSW GVAK R+ELAYPAD+YLEGSDQHRGWFQSSLLTSVAAN QAPYKTVLTHGFVLDEKG+KMSKSLGN +DP+++IEGGNNKK +PAYGADVLRLWV+SVDY+GDVC+G N+IKQ
Sbjct:  121 KDQADKWKKGTDTMDVWFDSGSSWNGVAKTRDELAYPADIYLEGSDQHRGWFQSSLLTSVAANNQAPYKTVLTHGFVLDEKGFKMSKSLGNVIDPMQVIEGGNNKKLEPAYGADVLRLWVASVDYSGDVCIGTNIIKQ 258
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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S2A607_TRICV (Isoleucine--tRNA ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A607_TRICV)

HSP 1 Score: 260 bits (665), Expect = 1.640e-80
Identity = 116/138 (84.06%), Postives = 132/138 (95.65%), Query Frame = 1 
Query:    7 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 420
            ++EAD+W++GTDTMDVWFDSGSSWAGVAK R ELAYPAD+YLEGSDQHRGWFQSSLLTSVAA G+APYKTVLTHGFVLDEKG+KMSKSLGN VDP+++IEGGNNKK +PAYGADVLRLWV+SVDY+GDVC+G N+IKQ
Sbjct:  280 KNEADKWKKGTDTMDVWFDSGSSWAGVAKGRSELAYPADIYLEGSDQHRGWFQSSLLTSVAAQGKAPYKTVLTHGFVLDEKGFKMSKSLGNVVDPLKVIEGGNNKKAEPAYGADVLRLWVASVDYSGDVCIGQNIIKQ 417
[Close]
BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S2XLF5_9STRA (Isoleucyl-tRNA synthetase n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLF5_9STRA)

HSP 1 Score: 256 bits (653), Expect = 7.950e-80
Identity = 114/138 (82.61%), Postives = 131/138 (94.93%), Query Frame = 1 
Query:    7 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 420
            + EAD+W++GTDTMDVWFDSGSSW GVAK R+ELAYPAD+YLEGSDQHRGWFQSSLLTSVAANG APYKTVLTHGFVLDEKG+KMSKSLGN V+P+++I+GGNNKK +PAYGADVLRLWV+SVDY+GDVC+GD +IKQ
Sbjct:  160 KGEADKWKKGTDTMDVWFDSGSSWNGVAKGRDELAYPADVYLEGSDQHRGWFQSSLLTSVAANGVAPYKTVLTHGFVLDEKGFKMSKSLGNVVNPLKVIDGGNNKKLEPAYGADVLRLWVASVDYSGDVCIGDGIIKQ 297
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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A8J9WZV3_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9WZV3_PHATR)

HSP 1 Score: 254 bits (648), Expect = 8.590e-80
Identity = 114/139 (82.01%), Postives = 131/139 (94.24%), Query Frame = 1 
Query:    4 LRSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 420
             R+EAD+W++GTDTMDVWFDSGSSWAGVA++R+ELAYPAD+YLEGSDQHRGWFQSSLLTSVA N  APYKTVLTHGFVLDEKG+KMSKSLGN VDP+++IEGGNNKKQ PAYGADVLRLWV++ DY+GDV +GDN+IKQ
Sbjct:   81 FRAEADKWQKGTDTMDVWFDSGSSWAGVAQSRDELAYPADMYLEGSDQHRGWFQSSLLTSVANNNIAPYKTVLTHGFVLDEKGFKMSKSLGNVVDPLKVIEGGNNKKQDPAYGADVLRLWVANSDYSGDVLIGDNIIKQ 219
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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S1ZYZ0_9STRA (Isoleucine--tRNA ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYZ0_9STRA)

HSP 1 Score: 262 bits (669), Expect = 3.210e-79
Identity = 116/138 (84.06%), Postives = 133/138 (96.38%), Query Frame = 1 
Query:    7 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 420
            + EA++W++GTDTMDVWFDSGSSWAGVA AR+EL YPADLYLEGSDQHRGWFQSSLLTSVAA GQAPYKTVLTHGFVLDEKGYKMSKSLGN +DP+++IEGGNNKKQ+PAYGADVLRLWV++VDY+GDVC+G+N+IKQ
Sbjct:  597 KEEAEKWKKGTDTMDVWFDSGSSWAGVASARDELQYPADLYLEGSDQHRGWFQSSLLTSVAAQGQAPYKTVLTHGFVLDEKGYKMSKSLGNVIDPLKVIEGGNNKKQEPAYGADVLRLWVATVDYSGDVCIGNNIIKQ 734
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BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S4II32_9STRA (Isoleucine--tRNA ligase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4II32_9STRA)

HSP 1 Score: 261 bits (667), Expect = 4.760e-79
Identity = 116/138 (84.06%), Postives = 134/138 (97.10%), Query Frame = 1 
Query:    7 RSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 420
            R++A +W++GTDTMDVWFDSGSSWAGVA++R+ELAYPADLYLEGSDQHRGWFQSSLLTSVAA G+APYK VLTHGFVLDEKG+KMSKSLGN VDP+++IEGGNNKKQ+PAYGADVLRLWV+SVDYTGDVC+G+N+IKQ
Sbjct:  560 RADASKWKKGTDTMDVWFDSGSSWAGVARSRDELAYPADLYLEGSDQHRGWFQSSLLTSVAAEGKAPYKAVLTHGFVLDEKGFKMSKSLGNVVDPLKVIEGGNNKKQEPAYGADVLRLWVASVDYTGDVCIGNNIIKQ 697
[Close]
BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Match: A0A7S1BCM6_9STRA (Isoleucine--tRNA ligase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCM6_9STRA)

HSP 1 Score: 258 bits (659), Expect = 7.490e-78
Identity = 118/137 (86.13%), Postives = 128/137 (93.43%), Query Frame = 1 
Query:   10 SEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQHRGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEIIEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ 420
            +EA +WR+GTDTMDVWFDSGSSWAGV K REELAYPADLYLEGSDQHRGWFQSSLLTSVAA GQAPYKTVLTHGFV+DEKGYKMSKSLGN V P  IIEGGNNKKQ+PAYGADVLRLWV++VDY+ DVC+GDN+IKQ
Sbjct:  590 AEAHKWRKGTDTMDVWFDSGSSWAGVVKTREELAYPADLYLEGSDQHRGWFQSSLLTSVAAEGQAPYKTVLTHGFVMDEKGYKMSKSLGNVVSPALIIEGGNNKKQQPAYGADVLRLWVATVDYSSDVCIGDNIIKQ 726
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9028.17111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2M1_9PHAE2.590e-8592.86Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U6EBV7_9STRA6.600e-8284.06Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0BWH6_9STRA1.290e-8181.43Isoleucyl-tRNA synthetase (Fragment) n=1 Tax=Probo... [more]
A0A7S1CY54_CYCTE6.960e-8182.61Isoleucyl-tRNA synthetase n=1 Tax=Cyclophora tenui... [more]
A0A7S2A607_TRICV1.640e-8084.06Isoleucine--tRNA ligase n=1 Tax=Trieres chinensis ... [more]
A0A7S2XLF5_9STRA7.950e-8082.61Isoleucyl-tRNA synthetase n=2 Tax=Attheya septentr... [more]
A0A8J9WZV3_PHATR8.590e-8082.01Hypothetical protein n=1 Tax=Phaeodactylum tricorn... [more]
A0A7S1ZYZ0_9STRA3.210e-7984.06Isoleucine--tRNA ligase n=1 Tax=Ditylum brightwell... [more]
A0A7S4II32_9STRA4.760e-7984.06Isoleucine--tRNA ligase n=2 Tax=Odontella aurita T... [more]
A0A7S1BCM6_9STRA7.490e-7886.13Isoleucine--tRNA ligase n=1 Tax=Corethron hystrix ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9028contigS-dermatodea_contig9028:850..8501 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score252.7
Seed ortholog evalue1e-64
Seed eggNOG ortholog2850.Phatr17198
Preferred nameISM1
KEGG rclassRC00055,RC00523
KEGG koko:K01870,ko:K18171
KEGG ReactionR03656
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
GOsGO:0000003,GO:0000166,GO:0000959,GO:0003006,GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009791,GO:0009908,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0022414,GO:0030554,GO:0032501,GO:0032502,GO:0032543,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0035670,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048367,GO:0048437,GO:0048438,GO:0048440,GO:0048467,GO:0048481,GO:0048608,GO:0048731,GO:0048827,GO:0048856,GO:0061458,GO:0070127,GO:0070152,GO:0071704,GO:0090304,GO:0090567,GO:0097159,GO:0097367,GO:0099402,GO:0140053,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Belongs to the class-I aminoacyl-tRNA synthetase family
EggNOG OGs2XBBT@2836,COG0060@1,KOG0433@2759
EC6.1.1.5
COG Functional cat.J
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Hectar predicted targeting categoryother localisation
Exons3
Model size420
Cds size420
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9028.17111.1prot_S-dermatodea_contig9028.17111.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig9028 850..8501 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622925380.987487-CDS-S-dermatodea_contig9028:849..9721622925380.987487-CDS-S-dermatodea_contig9028:849..972Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9028 850..972 -
1694079894.8653183-CDS-S-dermatodea_contig9028:849..9721694079894.8653183-CDS-S-dermatodea_contig9028:849..972Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9028 850..972 -
1622925380.999675-CDS-S-dermatodea_contig9028:4236..43971622925380.999675-CDS-S-dermatodea_contig9028:4236..4397Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9028 4237..4397 -
1694079894.884721-CDS-S-dermatodea_contig9028:4236..43971694079894.884721-CDS-S-dermatodea_contig9028:4236..4397Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9028 4237..4397 -
1622925381.010266-CDS-S-dermatodea_contig9028:8365..85011622925381.010266-CDS-S-dermatodea_contig9028:8365..8501Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9028 8366..8501 -
1694079894.8989644-CDS-S-dermatodea_contig9028:8365..85011694079894.8989644-CDS-S-dermatodea_contig9028:8365..8501Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig9028 8366..8501 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig9028.17111.1

>prot_S-dermatodea_contig9028.17111.1 ID=prot_S-dermatodea_contig9028.17111.1|Name=mRNA_S-dermatodea_contig9028.17111.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=140bp
SLRSEADQWRRGTDTMDVWFDSGSSWAGVAKAREELAYPADLYLEGSDQH
RGWFQSSLLTSVAANGQAPYKTVLTHGFVLDEKGYKMSKSLGNTVDPIEI
IEGGNNKKQKPAYGADVLRLWVSSVDYTGDVCVGDNVIKQ
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mRNA from alignment at S-dermatodea_contig9028:850..8501-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig9028.17111.1 ID=mRNA_S-dermatodea_contig9028.17111.1|Name=mRNA_S-dermatodea_contig9028.17111.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7652bp|location=Sequence derived from alignment at S-dermatodea_contig9028:850..8501- (Saccorhiza dermatodea SderLu1190fm monoicous)
TCTCTCCGGTCGGAAGCGGACCAATGGCGTCGGGGCACGGACACGATGGA
CGTGTGGTTCGACTCCGGGTCGTCGTGGGCGGGAGTTGCGAAAGCCAGGG
AGGAGTTGGCGTATCCCGCTGATCTGTACCTGGAAGGTGAGCGAGAAAGG
GGAGGCGTGCGTGCGTGTTTCGTTTCGACGTGGGGAGTGCGTTCGACGGG
CGCTTTTTTTTCCCGATGAACCGGCGGCCTTTACAATACAGTATGCATAA
GGCGCCTGGATCGCTTTGTATATATTGTACTATTAATAGCAGTTTTTTGT
TCCTTGTTTTTTTCACGTCGTGTTTTTGGTGAATTAGCCGTGTTTCTTGT
AGGGTAGTTTTGACGCTCTGATCTATAGCCAATAAGCCGTTTTTTTTTTT
GTCGAAGCCCTGGGGACGCCTACCTGCACGTCAAAACCCTTTTATAACAG
GTTGGTACCGAGGAGTCTGATTGCTTATCACACTTGCAAGCGACCGGCCC
ACCAATAGTTGCCGATCCCGCTCTCGTGGATCAGATGATAAATCGAAAGA
TCGAAGAAAAACAAAAAACTAATACAATCTGAGAAGGAATTTCCACAGTA
TTACGGGGGACTATACCATAGTTAACAGGTCCAAATTTGCTACAAATCTC
AACCTAGAAAAAACAAAATAGGCTGGAATTATCGAGATTTCAAGGTCCAT
GTTCTCTTCTGTATGGCCATATATCGTGTTGTTTTTTTTCACGAGAGAGA
CCCTTCTGTTGTTGGATATGGTATGACAATATATTATATTGTATTGTATT
CATGGTCGGAATAGTATAGTTGGGTATTCATGCTTATGAGATATGGTCCT
GATTACTCTGTACCTCCGTAGTGTAATAACTCTCGGAAGCAGAGGGGGCA
CATACCTCGAAACTTGGGGCTTGCTAAAAAAAAAAAAAAAAAGGCACCCC
TTTCCTCCTGCAGAAAAGCCTCAGCGCACCCAAGATGTCCTTATCGAGTC
TGGATTAGGGCGAGGGTGACGCTTTTTGCGGTGAAGCCGTACCTACCGTC
CATGCACCAAGCTAAATTACCTATGCAAGTGCCGGGCCGGTCGGTTGTAA
GTGTGAAAATAAATCAAATCAATCAATCAATCAATCAATCAATCAATCAA
TGCTACAAAGTGAAATATGTAATATTCACCCCTTCTAACCAAACGGCATG
ACGTCACGGATTTCCAGAGGCCCCGCCGCCCCCATTGGGTGATATTTGCG
CCGCTTCAAGGGTAGGGTGGGTAGGCTACTGCTAGCGTTAGAGCGGCGGT
GTTGTAAGCGAGGGGGGACTTGACGTTTTCGACGCTTTGGTTGTGTTCGA
CGTCTCGACAACGCACATCAACAACACTATCGGGCAGGAAACCGAAGTCC
TGTTGCTGCTGCTGCTGCTCCTCGCACAGCCAACACAGCACAAGGCTGAC
GGCTCGTGAAGCTTGCTACGCGTATGTACATGTATACAACAAACCCTTCG
GACGTAGCCTTATATCCCCAGGCTAATACCTGAAGTTATCGCGGGGTGAC
GCGAGTAGGATGGCATGCAATCTATCGATCGAGTAGCCGAGGACGTTCAC
GAATGCAAAAAAAGCTAAGTCAGACAGTCGGGGGGGGATCGTTGCGGATA
CTATCGCATGCATATGAGAATCATAATATTATACGGTTAGACTGCGACCG
ACCGCGTCCTCGTAGTATCGCTACATCTTGTATGGTAGGTCGATGGCATA
CCCTGCTGGCTGGCTGCCGTAACAAACTAACTGCTGCGGGAGAGAAGATC
CAATACAAGTTTGTTTCTTTATTTTTACATGCATTTGGAAGCAACATTTT
TTACCCGAACGTGGACACTGACTGAGTCACGGAACACACAGTGTGAGCTA
CGCTTCCTATAGGAGAGATACGTTTTCAGTGTATATATTCTCGACACCAG
TCCTAGCAGTAGTGGTGCCCGCATCGTTCCGCATTGGGTTGCCTAATATG
CAGCTATAATTAGACCTTGTAATTACCGACAAAAACTCGCAGCTACAGGC
AACTGCTACTGCTGTAGTATTAGCTGCCTATGAAAGAGAGATCTTGTATC
TTTTACATGAATCCAGTTTACATAATAAAAACTCTTCCTGGAAGTAGATG
TTGACACGGAGCCCTCAGGACGAGCTGCGCTACGTACTTATTTGCAGGAG
TAGATGTACTCAACGCATCTAGTTTCGGCTCGCCAGCCGCGGGGGAGGTC
GAGCTACGCAGTAAAGCAGGCATTGAACGTCATGTGGGACGAAAAACCCA
AACAAAATATGACAGATTCAGCGAAACAAAAAAAATACGAACGGTCCGCG
CGCGGGGATTCATTCGCGCGAGAAGAAAAAAAATCACGCGACATACATAG
CCTCGGCTACAGCACACAGCACACCTCCACTCGGCGATACAGGGATATCG
CGGAGACCGTTCTTCGACGACAGCGTGTCTAGACGTGTACTTGTAGTACG
TGCCCACGCTGTAGTGCTTCGTGGAGCCTTGTGGCATCGATGATGATGAA
TCCAAAAGGTTTGCTTCAACTCTCTCGAAACAACTTGTACTCTACTTGTT
TTATACAGTTTTTGTTTTTCGTGTGCAATTTCTCAGCATCATCAACAACA
GCTGTACAGGATAGAGCATTCCGTGTAGGGGCGGCGCATTAGAGCCCCCC
GCCGGACAGCAGCGCTAGCAGTAGCGGTACCCGCGTCGATCCGCAGGGAG
CTGCCCTCCTCACTGGCTTCGTGCCTCCGGAAACTTAGTCACACCGCTTT
CAATAGGTGGAAAATGAAGAAAAGCAAACACCCACCACGTTCGCATCAAC
GCCACCAACAGACGAAATATACAAAGACAGCAATCAACGTACAGCGTGGG
ACCAAGAGGGAGATTCCTAAGCTCAGAAAAAATCTCAAAAATAAGTTTGT
AAGTTCTTTTATCTACATCGGCGTGCAAAAAGAGAAATCGGCCGTCGGTC
GCTAAAATTGCAACCGACGGGAACTAAAAATACTCGGGAATCAACCGATC
GGCGGTGAACCGGCGGTTTTCCCCCCCTCCTATTTCAACGCCGTGATGCT
GTAAACACAGGAGTACAACACAATTTTTCACTGGCAGCCCACGTTCGGTT
TTTCGCTTTCTCCCTCTATTTGAACGCCCGATGTATAAGCACAGGAGTAT
TTTTTAGAAAGAAACAGAACACAGAAGGTGCACAATCCATAACTCATCGG
GAGAGGACCAACCCGGGTGGACTTTGTTGTACACAAAACTGAGATAATTT
CACGTCCTTTCGAAATAAAATATCGTTACTCGTAGTAGAACATGGTTCAG
GCGGCTAGACTCCCCAAGTGCGATACTTGGCTCAGCATAATGTACCCCAG
CGAACCGCCAGTTACGATTCTGCGCGCGTGCTACCACGTTTACTCCAAGG
GAACACGTAGATAAGGTATTGTTACAGCAGCAGTAGTAGTATCACATGTG
AAGGAGGTACACAGTTGCGTGTACCCAACATGACAAGGAACCATGCATTG
CCTGAGGCCTCGGCAGCAGCAGCTGCTGGTGACGGACTTCTTAAGGCTTC
GTCGGCTGTCGGTCGTCCTCTTAAATGCTCAGCATCGTTTTTTTTCTTCC
AGGAACAAAGACAGGAATAATTCAACGCAACAAGTACCTATACCTATACT
ATATACTACTATAGTATACGAGTATTAGTCCTGAGTCACATTCAACGACG
CGATGGGACAATGTATAAATATGGAATGAGGATGCATGTTGAGAATATAT
ATCTGGTCTGGCCTCACAATGTCTATTTTCTGCGATATTTTCTGCGATAC
TTCCGGCCTGAAATATCAACAAAAACCTCTAAAATATAATATTAATATTA
TCACAAGGCGTTCGGGCCAACCCTTAGAACGACACATGAAGACTGTACTC
TACTGAGCAGAAATTCGGCCCTGATTACCGTGTGCACCTCCGTAGTAATT
ACAGTACTCTGTACAATGCCAGTACATTATTACAAGTATAGTAAGCCGCG
TTACCTCACTTTTTTTTCTTTTTTATTGTTTTTTTGTGTCTGACGTGACA
AAAGGGTCGGACCAGCACCGAGGGTGGTTCCAATCGAGCCTGCTGACGTC
CGTCGCTGCGAACGGGCAAGCGCCGTACAAGACCGTGCTGACGCACGGCT
TCGTGCTGGACGAGAAGGGTTACAAGATGAGCAAGTCTCTGGGCAACACC
GTCGACCCCATAGAGGTGAGCAAAGTTGTTTGCAGCTAGTATTTTCTTTA
GTTGGTCCTATAAGTTAGTTTTCTCCTTGGCTTTTTGCGTATCTGACCAC
AAGTCGGGTCGGATTAAGCCCATCGGCTATTCGTGTGCAAACCAATCAAT
CAATCAATCAATCGTTATTAAAAAAACCCTGAGGAGCCTCCTCTATATCT
CTGTTGAAGACGGAAGACTATTAATACAGCTCTTTTGTGGTAGGTAGCCA
CGGCTACGCCCGTGTGGCGAGCAAAGCTCTCCTCAATTGGTTCTATGTAA
TATTCCTGATAAGCCATATATCTCTATGAAAGACGAAGGTTAGAGCTTTT
CGTAGGTAAGATCGCCACGGCTACGCCCGTGAATGTATGCCTTGGTAGGT
AGTGGGGATGTACGGCCAACGAACAACAAACAGCAGGGAAAAAAAAAACT
TTCCTAGAGCCTGGAAACCCCAAGTTCAAATACTGTACTTGGACCAGTAG
TCCTTACAAAAGAAAGCCTCAGAAGAGCCTACTCTACACCCTTTAAAACG
TGCAAAGCGTTACAATATATTATGATATTAATACTAGGGCGATACGCTAG
AACCGGTATACCGGGCGCTTAATATGCCACACCCGGTATAGCATGAGACG
GGCTTCGCCAACGTTCCAAGCGGCGGCAGAAACGCATGTTTTGGCCTATG
TTTTTTCCCCACATCGAGGCTGGTCTCCACGGGCACCCGTTAAAAAAAGT
CAAAATGCAAAGTATTGCATCCTCGACCCACACCACACTACACACAAGAT
GGGACGTCACTGCAAAACTCCGCTGTACCACATTCAGCGTAGAAAGGATA
CCGGTACAACGCATCCAGACTAAACAGGTTGGCCTTCACCGGTTCTAGCT
TATCAAATGATCGCATCTAGCCTCGCAAGTCAACTTCTGTACCAGATTGA
GCTTATACCAGCATCATAGCAAAGTACCGGGGGAGTACGCAGTCATTTGA
ACGTACGAACGCGGTTTCCACGACCGACCGCGTGGAAACACATGGCGCGG
ACCATGGTGCAGACCCGCGGCTCTATACTTGTACTCTGGTCTCGACCAGG
AGGGTACGTATGTATGGTGTGCATAACAAGGGAATTAGCTTAAACCGAAC
GCTCCATGCAACCACATCAAAATCTGAAACGGTGCTTGAATGACACTGTC
GATGGACAAGAGGTAATGATTTATAGAGGAAGCACTTAACCGCTCGCCCC
GTGGTTGAACTGGTTGACCAACAGCCCAGTAGGCGGATGATCCGGGTGCA
TAGTCGATGCTATACATATACTGAAGTATTTTCTCTACCTCTGCCGCAGA
AAGCGCGAGAGCGTGAGTAAGCAAAAAATCCGAGAAATCGGCGAGCTGTG
GGAGTGCCGAACCCAAAGCGCGATAAAAATCAAAGGTGAGAACCGGGGAT
AAGAGAGATGGGAGCATCCCTTGTGACCACAGACGGACCTACCTCGGAAA
AGCAAGTCTACACATGTATGCCAACAACAACAACAACAACCAGCAACTAA
AATGACGCACACTCGATCATACAACAGTCACGCACAAAAAATCGAAAAGG
ATACAACACTGCACTACACGCAACAGCAGGAGTTCCCTCTTCGTCGCTGC
AAAAATATATCCTACAAATGTGTTTAGCCCCTTTGCTCACGGTAGTATGA
CGTTAAATACCTTACCAAAATAAATGGTGATTTGTTCAGATGATGCCTTC
GGGAAACGCAGACACGGAAAAGCAACGCGGTGAATACAAGTACCGAGACA
AGCGACGGTCCGCCGAGGAGAAGATTATCTGAGGGGCTGGCTGTATGTCG
CGCGGTTACCCCGATAACACAGGGAACTGAGATGAATCGTACATATTACA
GAGATAAGATGATGAGATGGGAAGAGGGACTATAGAGCTCTACTGTAATA
TTATAGCGGATCGGCGCCATGTAAACACGAGGAGGTCGGTCGTGCGAACA
ATGTATACAAAAATTAATGTACAGTATTATTTCGAATCGGTGGGGCGTGG
CAGACAGGGGCTGGCTTCGTGCGCGTGGCCGAAGGGCTGGTTACGTGCGC
GAGGCCGACCGGCTGGATGCGTGCGCTTTGCCGTGCGCATAGCTGCGCGG
GCGTGTGTACTGTGGGAAAGGCAGGTCCGCCGAGGGGGAGGTTGACCGAG
GGGCTGCCTCTAGGTCGCGCAGTTGCCCCGAAAACACAGGCAGGAGGGAA
ATATATGGAATGGTCTTGACCCTTTTGGGACTAAAGCTGTTTTCGGGAAA
CTGTTTGCTGTTATTATATACCCTTTTGTTTTGGGNNNNNNNNNNAGGCT
TAGTCCCAAAAGGGTAAATAATAGTGAGCAAACAGTTACCCGAAAACAGC
TTTAGTCCCAAAAGGGTTAGTACTACTGCTGTATGATGTATACTCCTGAA
TCTATCTGGTATCTGGCATGTATCATTATAGACGGGAAGAGGAGGAAGTA
GCGGATATGCGCCATGTTCCCTCGAGGTCTGTCATGGAACCTGTCAAGAA
CCGTTTCTTTCCGAGAAGCTGGTTTACGTTGTATCATAAGAGGCTCGAGG
CTGGCTCTAGGTCGCGCGTTTCTCTCGGAAACGCCGAGAGATACGTATGA
TACGAGACCAGAGTACAAGTATAGAGCCGCGGATCCGCACCATGGTCCGC
GCCATGTGTTTCCCCGCGGTCGGTCGTGGAAACCGCGTTCGTACGTTCAA
ATGATTGTGTATTTCCCCGGTACTTTGCTATGATGCTAGTGTAAGCTCAA
TGTGGTACAGAAGTTGACTTGCGAGGCTAGATGCGATCATTTGATAAGCT
AGAACCGGTGAAGGCCAACCTGTTTAGTCTGGATGCGTTGTACCGGTATC
CTTTCTACGCTGAATGTGGTACAGCGGGGTTTTGCAGTGATGTCCCATCT
TGTGTGTAGTGTGGTGTGGGTCGAGGATGCAATACTTTTCATTTTTCATT
TTTTTAACGGGTGCCCGTGGAGGCCAGCCTCGATGTGGTAAAAAAACATA
GGCAAAAAAATGCGTTTCTGCCGCCGCTTGGAACGTTGGCGAAGCCCGTC
TCAAGCTATACCGGGTGTGGCATATTAAGCGCCCGGTATACCGGTTCTAG
CGTATCGCCCTTAATACTACTTATTTAAAAACGTATAATACCACACATTT
TTTATTTTATTTCTATTATTGTATCGCAGCGCAATAAATTGTCGGTCCGC
ATCGCCCGTGTTCCGCGCCGCGCGTCCAGATAATTGAGGGAGGCAACAAC
AAGAAGCAGAAGCCTGCGTACGGGGCGGACGTGCTGCGGCTGTGGGTGTC
CAGCGTGGACTACACCGGAGACGTTTGCGTTGGGGACAACGTCATCAAGC
AG
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Coding sequence (CDS) from alignment at S-dermatodea_contig9028:850..8501-

>mRNA_S-dermatodea_contig9028.17111.1 ID=mRNA_S-dermatodea_contig9028.17111.1|Name=mRNA_S-dermatodea_contig9028.17111.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=840bp|location=Sequence derived from alignment at S-dermatodea_contig9028:850..8501- (Saccorhiza dermatodea SderLu1190fm monoicous)
TCTCTCCGGTCGGAAGCGGACCAATGGCGTCGGGGCACGGACACGATGGA
CGTGTGGTTCGACTCCGGGTCGTCGTGGGCGGGAGTTGCGAAAGCCAGGG
AGGAGTTGGCGTATCCCGCTGATCTGTACCTGGAAGTCTCTCCGGTCGGA
AGCGGACCAATGGCGTCGGGGCACGGACACGATGGACGTGTGGTTCGACT
CCGGGTCGTCGTGGGCGGGAGTTGCGAAAGCCAGGGAGGAGTTGGCGTAT
CCCGCTGATCTGTACCTGGAAGGGTCGGACCAGCACCGAGGGTGGTTCCA
ATCGAGCCTGCTGACGTCCGTCGCTGCGAACGGGCAAGCGCCGTACAAGA
CCGTGCTGACGCACGGCTTCGTGCTGGACGAGAAGGGTTACAAGATGAGC
AAGTCTCTGGGCAACACCGTCGACCCCATAGAGGGTCGGACCAGCACCGA
GGGTGGTTCCAATCGAGCCTGCTGACGTCCGTCGCTGCGAACGGGCAAGC
GCCGTACAAGACCGTGCTGACGCACGGCTTCGTGCTGGACGAGAAGGGTT
ACAAGATGAGCAAGTCTCTGGGCAACACCGTCGACCCCATAGAGATAATT
GAGGGAGGCAACAACAAGAAGCAGAAGCCTGCGTACGGGGCGGACGTGCT
GCGGCTGTGGGTGTCCAGCGTGGACTACACCGGAGACGTTTGCGTTGGGG
ACAACGTCATCAAGCAGATAATTGAGGGAGGCAACAACAAGAAGCAGAAG
CCTGCGTACGGGGCGGACGTGCTGCGGCTGTGGGTGTCCAGCGTGGACTA
CACCGGAGACGTTTGCGTTGGGGACAACGTCATCAAGCAG
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