prot_S-dermatodea_contig8971.17055.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8971.17055.1
Unique Nameprot_S-dermatodea_contig8971.17055.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length58
Homology
BLAST of mRNA_S-dermatodea_contig8971.17055.1 vs. uniprot
Match: D7G8R8_ECTSI (CNH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R8_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 3.910e-29
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 0
Query:    1 MSVLGSVNVSSIHERYAYDLFSWGDYEGAVGHFLVAETPVEHVLSLFPSLAPPEFVPP 58
            MSVLGSVNV SIHERYAYDLFSWGDYEGAVGHFLVAETPV+HVLSLFPSLAPPEFVPP
Sbjct:  371 MSVLGSVNVLSIHERYAYDLFSWGDYEGAVGHFLVAETPVDHVLSLFPSLAPPEFVPP 428          
BLAST of mRNA_S-dermatodea_contig8971.17055.1 vs. uniprot
Match: A0A835YS55_9STRA (CNH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS55_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.080e-16
Identity = 35/53 (66.04%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    2 SVLGSVNVSSIHERYAYDLFSWGDYEGAVGHFLVAETPVEHVLSLFPSLAPPE 54
            ++LG V + ++HERYAYDLFSWGDYEGAV HFL A  P+ HV+ LFPSL PP+
Sbjct:  381 ALLGGVAIPTVHERYAYDLFSWGDYEGAVSHFLQAGAPLPHVVGLFPSLLPPD 433          
BLAST of mRNA_S-dermatodea_contig8971.17055.1 vs. uniprot
Match: F0YJL4_AURAN (CNH domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJL4_AURAN)

HSP 1 Score: 52.8 bits (125), Expect = 1.630e-6
Identity = 26/43 (60.47%), Postives = 30/43 (69.77%), Query Frame = 0
Query:   12 IHERYAYDLFSWGDYEGAVGHFLVAETPVEHVLSLFPSLAPPE 54
            I ERYAY L+S GD+EGA  H+L AE   E V  LFPS+ PPE
Sbjct:  434 IEERYAYALYSRGDFEGASQHWLNAEAAPEAVAELFPSICPPE 476          
BLAST of mRNA_S-dermatodea_contig8971.17055.1 vs. uniprot
Match: F0YIN5_AURAN (CNH domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIN5_AURAN)

HSP 1 Score: 52.8 bits (125), Expect = 1.630e-6
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0
Query:   12 IHERYAYDLFSWGDYEGAVGHFLVAETPVEHVLSLFPSLAPPE 54
            + ERYAY L+S GD+EGA  H+L AET  + V  LFPS+ PPE
Sbjct:  606 VEERYAYALYSRGDFEGASQHWLNAETAPQAVADLFPSIRPPE 648          
BLAST of mRNA_S-dermatodea_contig8971.17055.1 vs. uniprot
Match: A0A6J1J1I5_CUCMA (vam6/Vps39-like protein n=9 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1J1I5_CUCMA)

HSP 1 Score: 50.8 bits (120), Expect = 7.790e-6
Identity = 25/53 (47.17%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    2 SVLGSVNVSSIHERYAYDLFSWGDYEGAVGHFLVAETPVEHVLSLFPSLAPPE 54
            S L S   SSIH RYA++LF  G YE A+ HFL ++  + +VL  +PS+A P+
Sbjct:  335 SSLRSAKESSIHIRYAHNLFDNGSYEEAMEHFLASQVDITYVLPFYPSIALPK 387          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8971.17055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G8R8_ECTSI3.910e-2996.55CNH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YS55_9STRA1.080e-1666.04CNH domain-containing protein n=1 Tax=Tribonema mi... [more]
F0YJL4_AURAN1.630e-660.47CNH domain-containing protein n=1 Tax=Aureococcus ... [more]
F0YIN5_AURAN1.630e-658.14CNH domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A6J1J1I5_CUCMA7.790e-647.17vam6/Vps39-like protein n=9 Tax=Cucurbitaceae TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8971contigS-dermatodea_contig8971:8617..8790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8971.17055.1mRNA_S-dermatodea_contig8971.17055.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8971 8614..8790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8971.17055.1 ID=prot_S-dermatodea_contig8971.17055.1|Name=mRNA_S-dermatodea_contig8971.17055.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=58bp
MSVLGSVNVSSIHERYAYDLFSWGDYEGAVGHFLVAETPVEHVLSLFPSL
APPEFVPP
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