prot_S-dermatodea_contig8953.17036.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8953.17036.1
Unique Nameprot_S-dermatodea_contig8953.17036.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length162
Homology
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BLAST of mRNA_S-dermatodea_contig8953.17036.1 vs. uniprot
Match: D8LE96_ECTSI (Ubiquitin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE96_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.340e-36
Identity = 101/196 (51.53%), Postives = 122/196 (62.24%), Query Frame = 0 
Query:    1 VESSADYGVQVEMLDL---AGVMLPSGGGA---IAGVSPLGAWRRFWRVTNHRLDSVNFTFMINPTPSQPESVYPYAWLNYVIPPLLREIKLLLKPRDTQIILEVDKIDLTREFGQCRFDWVFEAAP-----TESSV-------------------VPVQVA----AASDLLQEKAQLEGDLGEAARVALAAERQE 162
            VESS   GVQVEMLD    A +ML +GGG    +AG  PL   +RFWRVTNHR+DSV FTF I PTPS+ ++VYP    NY +P   R++ LLLKPR+T  I+EVDK+DLTREF    F+WVFEA P     TE +                    VP  V      ASDLL+++AQLEGDLGEAARVAL  E++E
Sbjct: 3666 VESSTSNGVQVEMLDATDTAMMMLGAGGGGHMTMAGGFPL---KRFWRVTNHRMDSVTFTFKIEPTPSRLDTVYPSRRPNYHVP-AGRDVTLLLKPRETAGIMEVDKLDLTREFQPHPFNWVFEALPETPTATEGAATAPXXXXXXXXXXXXXGEAVPTTVLPTALTASDLLEKQAQLEGDLGEAARVALKLEQEE 3857
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8953.17036.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE96_ECTSI1.340e-3651.53Ubiquitin domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8953contigS-dermatodea_contig8953:997..3622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8953.17036.1mRNA_S-dermatodea_contig8953.17036.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8953 997..3624 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8953.17036.1 ID=prot_S-dermatodea_contig8953.17036.1|Name=mRNA_S-dermatodea_contig8953.17036.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=162bp
VESSADYGVQVEMLDLAGVMLPSGGGAIAGVSPLGAWRRFWRVTNHRLDS
VNFTFMINPTPSQPESVYPYAWLNYVIPPLLREIKLLLKPRDTQIILEVD
KIDLTREFGQCRFDWVFEAAPTESSVVPVQVAAASDLLQEKAQLEGDLGE
AARVALAAERQE
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