prot_S-dermatodea_contig12785.1702.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12785.1702.1
Unique Nameprot_S-dermatodea_contig12785.1702.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length400
Homology
BLAST of mRNA_S-dermatodea_contig12785.1702.1 vs. uniprot
Match: D7FQX9_ECTSI (Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX9_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 5.350e-90
Identity = 202/421 (47.98%), Postives = 241/421 (57.24%), Query Frame = 0
Query:    1 MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYITATVKGLGIATAHKLVERHRSLDKIIRAVQSSKFVIPEGYWEEFKRARVTFRHHIVYDPQAEDASHGSAGWSGAASEAGTVWGLQEHDHRWSTMC-----EPSDDPHEG-KGAGASPPGHKGERHRGVHVEAARPPRFACRDDSVPRVGALALT-EPPDANRSKFVPVSAQHFHSTQVSEELETLQRRKRRLYTSGGEPPDPSPPRDWLGWQQPRQXXXXXPQRHDVIPESVRQIDVG--LPP--AREDNAD-----GQPGGAGDLWMAQANAAGEQRSSLRREETEEALTIPRETGCNAGKKD-RALTVSSRRWT--VPSHVPPAKGIELPLLRLLDGTGGGAGHSR--IDR---GRASSKPFNKRTRGTGFWDAQL 397
            MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYI ++VKGLGIATA+KLV+RHRSLDKII A+ SS+FVIPEGYWE++KRAR+TFRHHI+Y+P+ ED     A       + G   GL+     W         E +D  H+G K  G   P  +G  HR    ++    +   R+ +V R G LALT E P A+++KFVP SAQHF STQVS+ LETLQRRKRRLY        P+   + LG            Q+H V P +  ++  G  LP   AR DN        +P     LWM Q   A  +  S        +  +    G   G  + R LT SSRRWT  VPS  PP      PLLRLLDG G  A      +DR   G    +P  KRTRG  FWD  L
Sbjct:  186 MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYIPSSVKGLGIATAYKLVDRHRSLDKIIGAINSSRFVIPEGYWEQYKRARLTFRHHIIYNPETEDEKGHMADGKAMGWQQGPDIGLRATGEGWGQRLSVKSDETADARHDGHKNEGCMYPAAEGSAHR--KPDSRETNQDHAREANV-RQGLLALTGEVPVADQAKFVPASAQHFRSTQVSQGLETLQRRKRRLY--------PAEDPECLGLPS-------RGQQHQVQPGAADRMLHGSNLPVFGARVDNPTCKSGVDRPADNSGLWMVQPQEA--RGMSSVNPPAPVSSPVRLRAGSRLGSPEARVLTASSRRWTLPVPSTAPPVNREGFPLLRLLDGKGKVAPERSWSVDRRIGGARVGQPSPKRTRGVEFWDNLL 586          
BLAST of mRNA_S-dermatodea_contig12785.1702.1 vs. uniprot
Match: W7TNX5_9STRA (Exonuclease 1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNX5_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.780e-24
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 0
Query:    1 MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYITATVKGLGIATAHKLVERHRSLDKIIRAVQS---SKFVIPEGYWEEFKRARVTFRHHIVYDPQ 103
            +D EG  QEI+ RNLA N       W  +MFLD+CLL GCDY+   + GLGI TAHKLV +HR+  K++ A+ +    +  +P  Y E F RAR+TFRHH VYDP+
Sbjct:  186 LDKEGRAQEIERRNLALNEDYDFEGWTENMFLDMCLLAGCDYLP-NLPGLGIKTAHKLVRQHRTYKKVLGALATPGGKEMAVPGDYMERFARARLTFRHHYVYDPE 290          
BLAST of mRNA_S-dermatodea_contig12785.1702.1 vs. uniprot
Match: A0A836CAX1_9STRA (Exonuclease 1 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX1_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.390e-24
Identity = 54/105 (51.43%), Postives = 77/105 (73.33%), Query Frame = 0
Query:    1 MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYITATVKGLGIATAHKLVERHRSLDKIIRAVQSS-KFVIPEGYWEEFKRARVTFRHHIVYDPQA 104
            ++N+G  QEI+ R+L++N   SL+ W  SMFLD+CLL GCDY+   V GLGI TAHKLV RHRS   ++ A+++S KF +P+ + + F+ AR+TFRH  VYDP++
Sbjct:  186 LENDGSAQEIRARDLSSNENPSLAGWTYSMFLDMCLLAGCDYLPR-VHGLGIGTAHKLVARHRSHKPMLAALRASRKFALPDDFEDRFEMARLTFRHQRVYDPRS 289          
BLAST of mRNA_S-dermatodea_contig12785.1702.1 vs. uniprot
Match: A0A4D9D213_9STRA (Exonuclease 1 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D213_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.290e-23
Identity = 53/106 (50.00%), Postives = 69/106 (65.09%), Query Frame = 0
Query:    1 MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYITATVKGLGIATAHKLVERHRSLDKIIRAVQS---SKFVIPEGYWEEFKRARVTFRHHIVYDPQ 103
            +D EG  QEI+ RNLA N       W  +MFLD+CLL GCDY+   + GLGI TAHKLV +HR+  K++ A+ +    +  +P  Y E F RAR+TFRHH VYDP+
Sbjct:  127 LDKEGRAQEIERRNLALNEDYDFEGWTENMFLDMCLLAGCDYLP-NLPGLGIKTAHKLVRQHRTYKKVLGALATPGGKEMAVPGDYMERFARARLTFRHHYVYDPE 231          
BLAST of mRNA_S-dermatodea_contig12785.1702.1 vs. uniprot
Match: D8RZD7_SELML (Exonuclease 1 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RZD7_SELML)

HSP 1 Score: 101 bits (251), Expect = 5.460e-20
Identity = 45/109 (41.28%), Postives = 73/109 (66.97%), Query Frame = 0
Query:    1 MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYITATVKGLGIATAHKLVERHRSLDKIIRAVQSSKFVIPEGYWEEFKRARVTFRHHIVYDPQAEDASH 109
            MD  G G E+Q  +L  N  L+L+++   M L++C+L GCDY+ + ++G+G+  AH L+ R RS +K+IR ++ S  +IP+ Y E F++A +TF HH+VYDP  ++  H
Sbjct:  186 MDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEMCILSGCDYLPS-LQGMGVKRAHNLIRRFRSYEKVIRHLKFSGVMIPKSYEEGFRKALLTFCHHLVYDPTQDELVH 293          
BLAST of mRNA_S-dermatodea_contig12785.1702.1 vs. uniprot
Match: X6NYN0_RETFI (Exonuclease 1 (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NYN0_RETFI)

HSP 1 Score: 102 bits (254), Expect = 8.800e-20
Identity = 46/107 (42.99%), Postives = 72/107 (67.29%), Query Frame = 0
Query:    4 EGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYITATVKGLGIATAHKLVERHRSLDKIIRAVQSS-KFVIPEGYWEEFKRARVTFRHHIVYDPQAEDASH 109
            EG G EI L+NL +N  L  +NW + MF+D+C+L GCDY+ + + G+GI TAH+L+ +H +  K+++ ++S  K  IPE Y E F++A+ +FRH  VYD + +   H
Sbjct:   80 EGKGDEIVLQNLGSNRSLKFANWTHDMFVDMCILSGCDYLVS-IPGIGIKTAHQLISKHGNYQKVVQQLRSEGKIKIPENYPELFQKAKWSFRHQTVYDKELKRLVH 185          
BLAST of mRNA_S-dermatodea_contig12785.1702.1 vs. uniprot
Match: UPI000D1C6787 (exonuclease 1 n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C6787)

HSP 1 Score: 101 bits (251), Expect = 1.660e-19
Identity = 45/109 (41.28%), Postives = 73/109 (66.97%), Query Frame = 0
Query:    1 MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYITATVKGLGIATAHKLVERHRSLDKIIRAVQSSKFVIPEGYWEEFKRARVTFRHHIVYDPQAEDASH 109
            MD  G G E+Q  +L  N  L+L+++   M L++C+L GCDY+ + ++G+G+  AH L+ R RS +K+IR ++ S  +IP+ Y E F++A +TF HH+VYDP  ++  H
Sbjct:  186 MDKNGQGFELQYADLVKNRDLNLTSFTKRMMLEMCILSGCDYLPS-LQGMGVKRAHNLIRRFRSYEKVIRHLKFSGVMIPKSYEEGFRKALLTFCHHLVYDPTQDELVH 293          
BLAST of mRNA_S-dermatodea_contig12785.1702.1 vs. uniprot
Match: A0A1V9ZBX7_9STRA (Exonuclease 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBX7_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.710e-18
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 0
Query:    1 MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYITATVKGLGIATAHKLVERHRSLDKIIRAVQ-SSKFVIPEGYWEEFKRARVTFRHHIVYDPQAE 105
            MD  G+  EI L++LA N  LS   + + MFLD+C+L GCDY+ A++ GLG+  +H L++R+ S  K++R+++   K  I + Y E+F+RAR+TFRH  VYDP  +
Sbjct:  186 MDQVGNVDEIVLKDLANNKALSFVGFSDDMFLDMCILSGCDYV-ASIPGLGVKKSHGLLQRYGSWKKVVRSLRLEGKLTIAKSYEEDFERARLTFRHQRVYDPTTQ 290          
BLAST of mRNA_S-dermatodea_contig12785.1702.1 vs. uniprot
Match: A0A1V9YDM5_9STRA (Exonuclease 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDM5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.880e-18
Identity = 46/106 (43.40%), Postives = 71/106 (66.98%), Query Frame = 0
Query:    1 MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYITATVKGLGIATAHKLVERHRSLDKIIRAVQ-SSKFVIPEGYWEEFKRARVTFRHHIVYDPQAE 105
            MDN GH  EI+L +LA N  LS   + + MFLD+C+L GCDY+ A++ GLG+  +H L++R+ +  K++RA++   K  I + Y  +  +AR+TFRH  VYDP+ +
Sbjct:  186 MDNTGHVDEIRLADLAKNKALSFVGFNDDMFLDMCILSGCDYV-ASIPGLGVKKSHGLLQRYGTWQKVVRALRLEGKLAITKSYEADVTQARLTFRHQRVYDPRTK 290          
BLAST of mRNA_S-dermatodea_contig12785.1702.1 vs. uniprot
Match: T0S5C3_SAPDV (Exonuclease 1 n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S5C3_SAPDV)

HSP 1 Score: 95.5 bits (236), Expect = 4.570e-18
Identity = 47/106 (44.34%), Postives = 70/106 (66.04%), Query Frame = 0
Query:    1 MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYITATVKGLGIATAHKLVERHRSLDKIIRAVQ-SSKFVIPEGYWEEFKRARVTFRHHIVYDPQAE 105
            MD  GH  EIQL NLA N  LS   + + MFLD+C++ GCDY+ A++ GLG+  +H L++R+ S  K++RA++  SK  I   Y  + + AR+TFRH  V+DP+ +
Sbjct:  127 MDQAGHVDEIQLSNLAKNKGLSFVGFNDDMFLDMCIMSGCDYV-ASIPGLGVKKSHGLLQRYGSWRKVVRALRIESKLKISPTYEADVEEARLTFRHQRVFDPRTK 231          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12785.1702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQX9_ECTSI5.350e-9047.98Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
W7TNX5_9STRA1.780e-2450.00Exonuclease 1 n=1 Tax=Nannochloropsis gaditana Tax... [more]
A0A836CAX1_9STRA3.390e-2451.43Exonuclease 1 (Fragment) n=1 Tax=Tribonema minus T... [more]
A0A4D9D213_9STRA2.290e-2350.00Exonuclease 1 n=1 Tax=Nannochloropsis salina CCMP1... [more]
D8RZD7_SELML5.460e-2041.28Exonuclease 1 n=1 Tax=Selaginella moellendorffii T... [more]
X6NYN0_RETFI8.800e-2042.99Exonuclease 1 (Fragment) n=1 Tax=Reticulomyxa filo... [more]
UPI000D1C67871.660e-1941.28exonuclease 1 n=5 Tax=Selaginella moellendorffii T... [more]
A0A1V9ZBX7_9STRA1.710e-1844.34Exonuclease 1 n=1 Tax=Thraustotheca clavata TaxID=... [more]
A0A1V9YDM5_9STRA2.880e-1843.40Exonuclease 1 n=1 Tax=Achlya hypogyna TaxID=120277... [more]
T0S5C3_SAPDV4.570e-1844.34Exonuclease 1 n=1 Tax=Saprolegnia diclina (strain ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008918Helix-hairpin-helix motif, class 2SMARTSM00279HhH_4coord: 28..62
e-value: 0.007
score: 25.6
NoneNo IPR availableGENE3D3.40.50.1010coord: 1..120
e-value: 2.0E-22
score: 81.8
IPR032641Exonuclease 1PANTHERPTHR11081:SF8EXONUCLEASE 1coord: 1..111
IPR006084XPG/Rad2 endonucleasePANTHERPTHR11081FLAP ENDONUCLEASE FAMILY MEMBERcoord: 1..111
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 28..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12785contigS-dermatodea_contig12785:424..5035 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12785.1702.1mRNA_S-dermatodea_contig12785.1702.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12785 424..5958 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12785.1702.1 ID=prot_S-dermatodea_contig12785.1702.1|Name=mRNA_S-dermatodea_contig12785.1702.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=400bp
MDNEGHGQEIQLRNLAANTPLSLSNWKNSMFLDLCLLVGCDYITATVKGL
GIATAHKLVERHRSLDKIIRAVQSSKFVIPEGYWEEFKRARVTFRHHIVY
DPQAEDASHGSAGWSGAASEAGTVWGLQEHDHRWSTMCEPSDDPHEGKGA
GASPPGHKGERHRGVHVEAARPPRFACRDDSVPRVGALALTEPPDANRSK
FVPVSAQHFHSTQVSEELETLQRRKRRLYTSGGEPPDPSPPRDWLGWQQP
RQQQQQQPQRHDVIPESVRQIDVGLPPAREDNADGQPGGAGDLWMAQANA
AGEQRSSLRREETEEALTIPRETGCNAGKKDRALTVSSRRWTVPSHVPPA
KGIELPLLRLLDGTGGGAGHSRIDRGRASSKPFNKRTRGTGFWDAQLLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008918HhH2
IPR032641Exo1
IPR006084XPG/Rad2
IPR0362795-3_exonuclease_C_sf