prot_S-dermatodea_contig8933.17024.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig8933.17024.1
Unique Nameprot_S-dermatodea_contig8933.17024.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length97
Homology
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BLAST of mRNA_S-dermatodea_contig8933.17024.1 vs. uniprot
Match: A0A6H5KQJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQJ0_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 3.010e-39
Identity = 67/96 (69.79%), Postives = 80/96 (83.33%), Query Frame = 0 
Query:    2 FDDPEAFAESIRAVRSDFNPADWCLVGYKDVGELRIVDAGKGGLDALLLAAEPYGVNYGLLRVSEKFDLVCHEAYCFVTWMPEIVPAFVKARVSTH 97
            F++PE FA +++ VRSD + ADWCL+GYK+   LR+V  GKGGL  LL AAEPYGVNYGLLRVSEKFD V HEAYCF++W+PE +PAFVKARVSTH
Sbjct:  209 FEEPEVFARAVKDVRSDLSFADWCLLGYKNETVLRMVGTGKGGLQCLLDAAEPYGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTH 304
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BLAST of mRNA_S-dermatodea_contig8933.17024.1 vs. uniprot
Match: D8LSR6_ECTSI (Actin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSR6_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 5.650e-39
Identity = 65/96 (67.71%), Postives = 79/96 (82.29%), Query Frame = 0 
Query:    2 FDDPEAFAESIRAVRSDFNPADWCLVGYKDVGELRIVDAGKGGLDALLLAAEPYGVNYGLLRVSEKFDLVCHEAYCFVTWMPEIVPAFVKARVSTH 97
            F++P+AF  +++ VRSD + ADWCL+GYK+   LR+V  GKGGL  LL AAEP GVNYGLLRVSEKFD V HEAYCF++W+PE +PAFVKARVSTH
Sbjct:  209 FEEPKAFGRAVKDVRSDMSFADWCLLGYKNETVLRMVGTGKGGLQCLLDAAEPSGVNYGLLRVSEKFDGVFHEAYCFISWIPENIPAFVKARVSTH 304
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig8933.17024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQJ0_9PHAE3.010e-3969.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSR6_ECTSI5.650e-3967.71Actin binding protein n=1 Tax=Ectocarpus siliculos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10coord: 3..97
e-value: 2.1E-13
score: 52.0
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 1..97
score: 10.83
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 5..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig8933contigS-dermatodea_contig8933:7324..8287 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig8933.17024.1mRNA_S-dermatodea_contig8933.17024.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig8933 7324..8287 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig8933.17024.1 ID=prot_S-dermatodea_contig8933.17024.1|Name=mRNA_S-dermatodea_contig8933.17024.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=97bp
MFDDPEAFAESIRAVRSDFNPADWCLVGYKDVGELRIVDAGKGGLDALLL
AAEPYGVNYGLLRVSEKFDLVCHEAYCFVTWMPEIVPAFVKARVSTH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR002108ADF-H