prot_S-dermatodea_contig1278.1700.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig1278.1700.1
Unique Nameprot_S-dermatodea_contig1278.1700.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length88
Homology
BLAST of mRNA_S-dermatodea_contig1278.1700.1 vs. uniprot
Match: D7FUP7_ECTSI (DNA topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP7_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 5.760e-47
Identity = 79/88 (89.77%), Postives = 84/88 (95.45%), Query Frame = 0
Query:    1 VYANCGGEEFTATGLMVTERNWLVIYEPYERWTGRTIPEFFQGQEFVPSVLVMEEGKTQAPLLLSESDLIGLMDQKGIGTDATIAEHI 88
            V ANCGGE+FTATGLMVTERNWL +YEP+ERWTGR IPEFFQGQEFVPSVLVM+EG+TQAP LLSESDLIGLMDQKGIGTDATIAEHI
Sbjct:  240 VLANCGGEDFTATGLMVTERNWLDVYEPFERWTGRNIPEFFQGQEFVPSVLVMDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHI 327          
BLAST of mRNA_S-dermatodea_contig1278.1700.1 vs. uniprot
Match: A0A835YM61_9STRA (DNA topoisomerase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM61_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.140e-29
Identity = 56/82 (68.29%), Postives = 67/82 (81.71%), Query Frame = 0
Query:    7 GEEFTATGLMVTERNWLVIYEPYERWTGRTIPEFFQGQEFVPSVLVMEEGKTQAPLLLSESDLIGLMDQKGIGTDATIAEHI 88
            GEEF+A+GLM+TERNWL IY P+ERW+ + IP F  GQEFVP+ L++ EG+T+ P LLSESDLI LMD   IGTDATIAEHI
Sbjct:  262 GEEFSASGLMITERNWLEIYHPWERWSDKAIPTFTVGQEFVPTSLMLTEGRTEPPPLLSESDLIQLMDANRIGTDATIAEHI 343          
BLAST of mRNA_S-dermatodea_contig1278.1700.1 vs. uniprot
Match: A0A067Q4C2_9AGAM (DNA topoisomerase n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067Q4C2_9AGAM)

HSP 1 Score: 119 bits (299), Expect = 1.580e-29
Identity = 53/88 (60.23%), Postives = 75/88 (85.23%), Query Frame = 0
Query:    1 VYANCGGEEFTATGLMVTERNWLVIYEPYERWTGRTIPEFFQGQEFVPSVLVMEEGKTQAPLLLSESDLIGLMDQKGIGTDATIAEHI 88
            V A CGGEEF+ATGL+V ERN+L++Y PY++W+ + +PEF +GQEF+P+V  ++EG+T +P LL+E+DL+ LMD+ GIGTDATIA+HI
Sbjct:  427 VDAECGGEEFSATGLVVLERNYLLVY-PYDKWSDKELPEFTEGQEFMPTVCELKEGQTTSPTLLTEADLVTLMDKNGIGTDATIAQHI 513          
BLAST of mRNA_S-dermatodea_contig1278.1700.1 vs. uniprot
Match: UPI000444A043 (prokaryotic type I DNA topoisomerase n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000444A043)

HSP 1 Score: 116 bits (290), Expect = 2.280e-28
Identity = 52/84 (61.90%), Postives = 69/84 (82.14%), Query Frame = 0
Query:    5 CGGEEFTATGLMVTERNWLVIYEPYERWTGRTIPEFFQGQEFVPSVLVMEEGKTQAPLLLSESDLIGLMDQKGIGTDATIAEHI 88
            CGGEEF ATGL++ ERN+L +Y PYE+W+G+ +P+F +G EF+PSV  + EG T  P LL+E+DL+GLMD+ GIGTDATIA+HI
Sbjct:  432 CGGEEFYATGLIILERNFLNVY-PYEKWSGKELPDFEEGDEFMPSVCELREGVTSPPNLLTEADLVGLMDKNGIGTDATIAQHI 514          
BLAST of mRNA_S-dermatodea_contig1278.1700.1 vs. uniprot
Match: A0A165QLH3_9AGAM (DNA topoisomerase n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165QLH3_9AGAM)

HSP 1 Score: 116 bits (290), Expect = 2.590e-28
Identity = 53/88 (60.23%), Postives = 70/88 (79.55%), Query Frame = 0
Query:    1 VYANCGGEEFTATGLMVTERNWLVIYEPYERWTGRTIPEFFQGQEFVPSVLVMEEGKTQAPLLLSESDLIGLMDQKGIGTDATIAEHI 88
            V   CGGEEF+ATGL+V ERN+L +Y PY++W+   IP+F +GQE +PSV  M EG+T +P LL+E+DL+ LMD+ GIGTDATIA+HI
Sbjct:  428 VEVTCGGEEFSATGLIVLERNYLEVY-PYDKWSSMEIPDFTEGQEIMPSVCEMREGQTTSPSLLTEADLVSLMDKNGIGTDATIAQHI 514          
BLAST of mRNA_S-dermatodea_contig1278.1700.1 vs. uniprot
Match: A0A2A9NYR8_9AGAR (DNA topoisomerase n=1 Tax=Amanita thiersii Skay4041 TaxID=703135 RepID=A0A2A9NYR8_9AGAR)

HSP 1 Score: 115 bits (289), Expect = 3.520e-28
Identity = 50/84 (59.52%), Postives = 70/84 (83.33%), Query Frame = 0
Query:    5 CGGEEFTATGLMVTERNWLVIYEPYERWTGRTIPEFFQGQEFVPSVLVMEEGKTQAPLLLSESDLIGLMDQKGIGTDATIAEHI 88
            CGGEEF ATGL+V E+N+L++Y PY++W+G  +PEF +G+EF+PSV  + +G+T +P LL+E DL+ LMD+ GIGTDATIA+HI
Sbjct:  427 CGGEEFHATGLVVLEKNYLLVY-PYDKWSGHELPEFEEGEEFMPSVCELRDGQTSSPSLLTEGDLVSLMDKNGIGTDATIAQHI 509          
BLAST of mRNA_S-dermatodea_contig1278.1700.1 vs. uniprot
Match: A0A5C3NBC1_9AGAM (DNA topoisomerase n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3NBC1_9AGAM)

HSP 1 Score: 115 bits (289), Expect = 3.540e-28
Identity = 52/88 (59.09%), Postives = 71/88 (80.68%), Query Frame = 0
Query:    1 VYANCGGEEFTATGLMVTERNWLVIYEPYERWTGRTIPEFFQGQEFVPSVLVMEEGKTQAPLLLSESDLIGLMDQKGIGTDATIAEHI 88
            V   CGGEEF+ATGL+V ERN+L +Y PY++W  + IP+F +GQ+ +PSV  M+EG+T +P LL+E+DL+ LMD+ GIGTDATIA+HI
Sbjct:  427 VEVTCGGEEFSATGLIVLERNYLEVY-PYDKWNSKQIPDFVEGQQLMPSVCEMKEGETTSPSLLTEADLVTLMDKNGIGTDATIAQHI 513          
BLAST of mRNA_S-dermatodea_contig1278.1700.1 vs. uniprot
Match: A0A8H5BSQ3_9AGAR (DNA topoisomerase n=1 Tax=Psilocybe cf. subviscida TaxID=2480587 RepID=A0A8H5BSQ3_9AGAR)

HSP 1 Score: 115 bits (287), Expect = 6.600e-28
Identity = 51/84 (60.71%), Postives = 69/84 (82.14%), Query Frame = 0
Query:    5 CGGEEFTATGLMVTERNWLVIYEPYERWTGRTIPEFFQGQEFVPSVLVMEEGKTQAPLLLSESDLIGLMDQKGIGTDATIAEHI 88
            CGGEEF+ATGL+V ERN+LV+Y  Y++WTG T+P+F +GQEF P+V  + +G+T  P  L+E+DL+ LMD+ GIGTDATIA+HI
Sbjct:  424 CGGEEFSATGLVVKERNYLVVYV-YDKWTGHTVPDFVEGQEFAPTVCEVRQGETTRPNYLTEADLVTLMDKNGIGTDATIAQHI 506          
BLAST of mRNA_S-dermatodea_contig1278.1700.1 vs. uniprot
Match: A0A0C9XCQ7_9AGAR (DNA topoisomerase n=1 Tax=Laccaria amethystina LaAM-08-1 TaxID=1095629 RepID=A0A0C9XCQ7_9AGAR)

HSP 1 Score: 114 bits (286), Expect = 9.020e-28
Identity = 51/84 (60.71%), Postives = 68/84 (80.95%), Query Frame = 0
Query:    5 CGGEEFTATGLMVTERNWLVIYEPYERWTGRTIPEFFQGQEFVPSVLVMEEGKTQAPLLLSESDLIGLMDQKGIGTDATIAEHI 88
            CGGEEFTATGL+V +RN+L++Y PY++W G T+P F +G+EF PSV  + EG+T  P  L+E+DL+ LMD+ GIGTDATIA+HI
Sbjct:  424 CGGEEFTATGLIVLQRNYLLVY-PYDKWIGHTVPNFQEGEEFDPSVCELREGQTSKPNYLTEADLVTLMDKNGIGTDATIAQHI 506          
BLAST of mRNA_S-dermatodea_contig1278.1700.1 vs. uniprot
Match: A0A0C2THH2_AMAMK (DNA topoisomerase n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2THH2_AMAMK)

HSP 1 Score: 114 bits (284), Expect = 1.660e-27
Identity = 52/88 (59.09%), Postives = 71/88 (80.68%), Query Frame = 0
Query:    1 VYANCGGEEFTATGLMVTERNWLVIYEPYERWTGRTIPEFFQGQEFVPSVLVMEEGKTQAPLLLSESDLIGLMDQKGIGTDATIAEHI 88
            V  + GGEEF ATGL+V ERN+L++Y PY++WTG  +P F + QEF PS+ +++EGKT +P LL+E+DL+ LMD+ GIGTDATIA+HI
Sbjct:  423 VEVDYGGEEFFATGLVVLERNYLLVY-PYDKWTGNVLPPFEEDQEFRPSLCLLKEGKTSSPSLLTEADLVSLMDKNGIGTDATIAQHI 509          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig1278.1700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUP7_ECTSI5.760e-4789.77DNA topoisomerase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835YM61_9STRA1.140e-2968.29DNA topoisomerase (Fragment) n=1 Tax=Tribonema min... [more]
A0A067Q4C2_9AGAM1.580e-2960.23DNA topoisomerase n=1 Tax=Jaapia argillacea MUCL 3... [more]
UPI000444A0432.280e-2861.90prokaryotic type I DNA topoisomerase n=1 Tax=Stere... [more]
A0A165QLH3_9AGAM2.590e-2860.23DNA topoisomerase n=1 Tax=Neolentinus lepideus HHB... [more]
A0A2A9NYR8_9AGAR3.520e-2859.52DNA topoisomerase n=1 Tax=Amanita thiersii Skay404... [more]
A0A5C3NBC1_9AGAM3.540e-2859.09DNA topoisomerase n=1 Tax=Heliocybe sulcata TaxID=... [more]
A0A8H5BSQ3_9AGAR6.600e-2860.71DNA topoisomerase n=1 Tax=Psilocybe cf. subviscida... [more]
A0A0C9XCQ7_9AGAR9.020e-2860.71DNA topoisomerase n=1 Tax=Laccaria amethystina LaA... [more]
A0A0C2THH2_AMAMK1.660e-2759.09DNA topoisomerase n=1 Tax=Amanita muscaria (strain... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013497DNA topoisomerase, type IA, centralPFAMPF01131Topoisom_baccoord: 3..88
e-value: 2.7E-18
score: 66.2
IPR013825DNA topoisomerase, type IA, central region, subdomain 2GENE3D2.70.20.10coord: 1..61
e-value: 2.9E-16
score: 61.8
NoneNo IPR availablePANTHERPTHR11390:SF21DNA TOPOISOMERASE 3-ALPHAcoord: 2..88
IPR000380DNA topoisomerase, type IAPANTHERPTHR11390PROKARYOTIC DNA TOPOISOMERASEcoord: 2..88
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 2..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig1278contigS-dermatodea_contig1278:16832..17381 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig1278.1700.1mRNA_S-dermatodea_contig1278.1700.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig1278 16832..17381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig1278.1700.1 ID=prot_S-dermatodea_contig1278.1700.1|Name=mRNA_S-dermatodea_contig1278.1700.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=88bp
VYANCGGEEFTATGLMVTERNWLVIYEPYERWTGRTIPEFFQGQEFVPSV
LVMEEGKTQAPLLLSESDLIGLMDQKGIGTDATIAEHI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013497Topo_IA_cen
IPR013825Topo_IA_cen_sub2
IPR000380Topo_IA
IPR023405Topo_IA_core_domain