prot_S-dermatodea_contig12779.1699.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig12779.1699.1
Unique Nameprot_S-dermatodea_contig12779.1699.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length902
Homology
BLAST of mRNA_S-dermatodea_contig12779.1699.1 vs. uniprot
Match: D7FWA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWA9_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 2.590e-21
Identity = 101/203 (49.75%), Postives = 112/203 (55.17%), Query Frame = 0
Query:  734 SSVRSSPVLMRPPMGSLPPAVP-SGRDVAASGPGIP--MAWSWSDSTLSGCSRSGGGGW---ASSVSASVSSDMASPLVGMRFVGEDS-----------SGSVREPPGSRSSLVPGVMGVPGLPLMGVRXSPPL------PVGRLGGGEPAVSA------------VSGAVAPPGVAVPTADSGLEGGVGGRQGKRPRRYFFP 901
            SS R+SPV  RPP+  LPPAV  SGRD+  S P     +AWS SDSTLSGCSR G GG     SS+  SV S+ ASPLVGMRFV +D            S S R  P S S    GV      PL+GVR SPPL      PV   G G PA SA            V+ AVA  G A    +S  EGGVGGR+GKRPRRYFFP
Sbjct:  814 SSFRTSPVP-RPPL--LPPAVVLSGRDLPPSDPAAAALLAWSLSDSTLSGCSRPGTGGXXXXTSSIPVSVCSEAASPLVGMRFVVKDGGXXXXXXXXXXSCSSRSRPNSWSDHGGGV------PLIGVRGSPPLGHPPSLPVALCGVGRPAASAEEEEGAAXGAGHVAAAVAGAGTAGVVDESSCEGGVGGRRGKRPRRYFFP 1007          
BLAST of mRNA_S-dermatodea_contig12779.1699.1 vs. uniprot
Match: A0A6H5JM28_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM28_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 7.200e-13
Identity = 79/166 (47.59%), Postives = 93/166 (56.02%), Query Frame = 0
Query:  664 IVAAAEAQAQVAWPSQ-------AAAACLPPSPLRSSPLXXXXXXXXLALNLVAVGVPS-QLLFTPPSPSGRSTSASP-SSVRSSPVLMRPPMGSLPPAVP-SGRDVAASGPGIP--MAWSWSDSTLSGCSRSG---GGGWASSVSASVSSDMASPLVGMRFVGED 814
            ++ +A   A   WPS        AA A + P+P  S+ L          L+L  VG P   LL TP         ASP SS R+SPV  RPP+  LPPAV  SGRD+  S P     +AWS SDSTLSGCSR G   GGG  SS+  SVSS+ ASPLVGMRFVG+D
Sbjct:  795 VIPSAPPSAAAPWPSSLGTLSQFAAGARISPTP--SAMLLSPSPKTPPPLSLTTVGAPPCHLLLTPXXXXXXXXXASPTSSFRTSPVP-RPPL--LPPAVVLSGRDLPPSDPAAAALLAWSLSDSTLSGCSRPGTGSGGGGTSSIPVSVSSEAASPLVGMRFVGKD 955          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig12779.1699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWA9_ECTSI2.590e-2149.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM28_9PHAE7.200e-1347.59Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 274..298
NoneNo IPR availableCOILSCoilCoilcoord: 306..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig12779contigS-dermatodea_contig12779:135..4276 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig12779.1699.1mRNA_S-dermatodea_contig12779.1699.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig12779 135..4276 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig12779.1699.1 ID=prot_S-dermatodea_contig12779.1699.1|Name=mRNA_S-dermatodea_contig12779.1699.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=902bp
MARPLPRHRSLGTRSDVASQHTLGLHSPADTVGWGPGSPLPWLAEEVKDI
EMGDASSEEEGNTRTPSNLSVSNTLQFASTTTSRPTPELPPPSDASLSDS
PPSPMSCPSPATPRAQLPAPPPRRRPPPAPWAPWRRQPERSIVPSWSSPG
VVRSSDVARVDFDGQVVAAEEGRVGAATAAGAVVNSSSTESLVLLMPPSP
ATPPFMGNSSSAGSSVPCGDRRWSGQQLLSAGSRLSSAERGIVREDQAFE
SCAAFAAVTGFKPARGFMPSMRLLDIAIAKEQDERRKAEALRREATRLPT
TGLFAVRTVAEEEEEEEKEEEDQEEAVEVVAGPVPAPMATQEAVASSPVD
SPPARVERMESKDIVSPKDAPTACVERMETVGDSDEGGGGLGQAVTSVGD
EFNLSPARSPSASASAMVVSPPSSPQAQLQPAAPDLALPWSVEIEGEDGD
ADGVAASQQPLPPPLPLSLSSSSRGSISPSSNGQSTPLGEKMLRSPKLLD
GPPLSPSGSSTPSLQATPLPLPQPRPPLEEELPVARPRPSSGSPAAERLM
PPPVRSVSPVDTAGDAATEGGNEDKATGALGALSPEVSTPPARPISSPET
AAPASIAAAPSNVAAPDPPPLAEQHEAEFAREEPSPSTPPIESLPGKRAP
PRREARERAPRDRIVAAAEAQAQVAWPSQAAAACLPPSPLRSSPLPPPPP
PPPLALNLVAVGVPSQLLFTPPSPSGRSTSASPSSVRSSPVLMRPPMGSL
PPAVPSGRDVAASGPGIPMAWSWSDSTLSGCSRSGGGGWASSVSASVSSD
MASPLVGMRFVGEDSSGSVREPPGSRSSLVPGVMGVPGLPLMGVRGSPPL
PVGRLGGGEPAVSAVSGAVAPPGVAVPTADSGLEGGVGGRQGKRPRRYFF
P*
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