prot_S-dermatodea_contig88495.16970.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig88495.16970.1
Unique Nameprot_S-dermatodea_contig88495.16970.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length86
Homology
BLAST of mRNA_S-dermatodea_contig88495.16970.1 vs. uniprot
Match: A0A6H5L1W8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1W8_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 5.120e-29
Identity = 52/61 (85.25%), Postives = 57/61 (93.44%), Query Frame = 0
Query:    2 VQDLPGVGWKLRRRLNDAGLNSCSDLWPLSAAHMQKGLGLGDKTGQALWEACRGIDKRPVQ 62
            VQDLPGVGWKLR+RLN+ G+ SCSDLWPLS  HMQKGLGLG+KTG+ALWEACRGIDKRPVQ
Sbjct:  825 VQDLPGVGWKLRKRLNEHGIASCSDLWPLSLTHMQKGLGLGEKTGRALWEACRGIDKRPVQ 885          
BLAST of mRNA_S-dermatodea_contig88495.16970.1 vs. uniprot
Match: D7FSG0_ECTSI (Terminal deoxycytidyl transferase rev1, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSG0_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 3.300e-28
Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = 0
Query:    3 QDLPGVGWKLRRRLNDAGLNSCSDLWPLSAAHMQKGLGLGDKTGQALWEACRGIDKRPVQ 62
            QDLPGVGWKLR+RLN+ GL SCSDLWPLS  HMQKGL LG+KTG+ALWEACRGIDKRPVQ
Sbjct:  564 QDLPGVGWKLRKRLNEQGLTSCSDLWPLSLTHMQKGLALGEKTGRALWEACRGIDKRPVQ 623          
BLAST of mRNA_S-dermatodea_contig88495.16970.1 vs. uniprot
Match: V4AK20_LOTGI (DNA repair protein REV1 n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AK20_LOTGI)

HSP 1 Score: 72.0 bits (175), Expect = 8.490e-13
Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    2 VQDLPGVGWKLRRRLNDAGLNSCSDLWPLSAAHMQKGLGLGDKTGQALWEACRGIDKRPVQVRAHTMNV---IN-AMKTIKHHDCDEFF 86
            V+DLPGVGW + R+L++  + +C DL  +  + +QK    G KTGQ+L+ +CRGID RP+++     +V   IN  ++  K H+C +FF
Sbjct:  591 VRDLPGVGWSMNRKLSNMNVKTCGDLQSVPLSTLQKEF--GSKTGQSLYNSCRGIDDRPIKMENERKSVSAEINYGIRFQKEHECVKFF 677          
BLAST of mRNA_S-dermatodea_contig88495.16970.1 vs. uniprot
Match: A0A1Y1VLD3_9FUNG (UmuC domain-containing protein (Fragment) n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VLD3_9FUNG)

HSP 1 Score: 68.6 bits (166), Expect = 1.400e-11
Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    2 VQDLPGVGWKLRRRLNDAGLNSCSDLWPLSAAHMQKGLGLGDKTGQALWEACRGIDKRPVQVRAHTMNVINA 73
            V DLPGVGW + +R ND  +N+C DL  LS + +QK    G KTGQ L+  CRGID R +   ++    I+A
Sbjct:  359 VSDLPGVGWSIAKRFNDMNINNCGDLQKLSLSTLQKEF--GKKTGQKLYNLCRGIDDRELNSESNERRSISA 428          
BLAST of mRNA_S-dermatodea_contig88495.16970.1 vs. uniprot
Match: B3RQD9_TRIAD (DNA repair protein REV1 n=2 Tax=Trichoplax TaxID=10227 RepID=B3RQD9_TRIAD)

HSP 1 Score: 63.9 bits (154), Expect = 5.900e-10
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    2 VQDLPGVGWKLRRRLNDAGLNSCSDLWPLSAAHMQKGLGLGDKTGQALWEACRGIDKRPVQV 63
            ++DLPGVG++L R+L D  + +C DL  +S   +Q+    G KTG  L++ CRGID+RPVQV
Sbjct:  535 LKDLPGVGYRLHRKLKDLNVETCQDLRKISLPVLQRDF--GTKTGLMLYQYCRGIDERPVQV 594          
BLAST of mRNA_S-dermatodea_contig88495.16970.1 vs. uniprot
Match: UPI001C70C9AC (DNA repair protein REV1-like n=1 Tax=Penaeus japonicus TaxID=27405 RepID=UPI001C70C9AC)

HSP 1 Score: 63.2 bits (152), Expect = 1.110e-9
Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    1 RVQDLPGVGWKLRRRLNDAGLNSCSDLWPLSAAHMQKGLGLGDKTGQALWEACRGIDKRPVQ 62
            +V +LPGVGW L +RL   G+++C D+   S   +Q     G +TGQ+L+  CRGID RPV+
Sbjct:  562 KVSELPGVGWSLGKRLESEGVHTCKDMQAWSLGQLQTSF--GSRTGQSLYNYCRGIDDRPVK 621          
BLAST of mRNA_S-dermatodea_contig88495.16970.1 vs. uniprot
Match: A0A3R7MPY2_PENVA (DNA repair protein REV1 n=2 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7MPY2_PENVA)

HSP 1 Score: 62.8 bits (151), Expect = 1.510e-9
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 RVQDLPGVGWKLRRRLNDAGLNSCSDLWPLSAAHMQKGLGLGDKTGQALWEACRGIDKRPVQ 62
            +V +LPGVGW L +RL   G+ +C D+   S   +Q     G +TGQ+L+  CRGID RPV+
Sbjct:  536 KVSELPGVGWSLGKRLESEGVRTCKDMQAWSLGQLQTAF--GSRTGQSLYNYCRGIDDRPVK 595          
BLAST of mRNA_S-dermatodea_contig88495.16970.1 vs. uniprot
Match: UPI001FB855E4 (DNA repair protein REV1-like n=2 Tax=Penaeus TaxID=133894 RepID=UPI001FB855E4)

HSP 1 Score: 62.8 bits (151), Expect = 1.510e-9
Identity = 28/62 (45.16%), Postives = 39/62 (62.90%), Query Frame = 0
Query:    1 RVQDLPGVGWKLRRRLNDAGLNSCSDLWPLSAAHMQKGLGLGDKTGQALWEACRGIDKRPVQ 62
            +V +LPGVGW L +RL   G+ +C D+   S   +Q     G +TGQ+L+  CRGID RPV+
Sbjct:  566 KVSELPGVGWSLGKRLESEGVRTCKDMQAWSLGQLQTAF--GSRTGQSLYNYCRGIDDRPVK 625          
BLAST of mRNA_S-dermatodea_contig88495.16970.1 vs. uniprot
Match: UPI00145820AD (DNA repair protein REV1-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145820AD)

HSP 1 Score: 61.6 bits (148), Expect = 3.870e-9
Identity = 32/88 (36.36%), Postives = 50/88 (56.82%), Query Frame = 0
Query:    2 VQDLPGVGWKLRRRLNDAGLNSCSDLWPLSAAHMQKGLGLGDKTGQALWEACRGIDKRPVQVRAHTMNV---INAMKTIKHH-DCDEF 85
            +Q++PGVGW + ++L    +  C DL  +S   +QK    G KTGQ+L+  CRG D RP+++     +V   IN     KH+ + D+F
Sbjct:  622 IQNIPGVGWSMSKKLKSMNIEKCGDLQKVSLGVLQKEF--GPKTGQSLYRYCRGEDDRPIKIEQERKSVSAEINYGIRFKHNGEADKF 707          
BLAST of mRNA_S-dermatodea_contig88495.16970.1 vs. uniprot
Match: A0A7S3C8L0_9CHLO (DNA polymerase kappa n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3C8L0_9CHLO)

HSP 1 Score: 61.2 bits (147), Expect = 5.180e-9
Identity = 29/62 (46.77%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    2 VQDLPGVGWKLRRRLNDAGLNSCSDLWPLSA-AHMQKGLGLGDKTGQALWEACRGIDKRPVQ 62
            V+++PGVGWK  RRL + G+ +C DLW LS+   +QK  G   K G+ +W+  RGID R V+
Sbjct:  351 VREIPGVGWKSSRRLEEMGVATCGDLWRLSSKTALQKSFGA--KQGELIWDYSRGIDSREVK 410          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig88495.16970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1W8_9PHAE5.120e-2985.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSG0_ECTSI3.300e-2885.00Terminal deoxycytidyl transferase rev1, putative n... [more]
V4AK20_LOTGI8.490e-1340.45DNA repair protein REV1 n=1 Tax=Lottia gigantea Ta... [more]
A0A1Y1VLD3_9FUNG1.400e-1145.83UmuC domain-containing protein (Fragment) n=1 Tax=... [more]
B3RQD9_TRIAD5.900e-1048.39DNA repair protein REV1 n=2 Tax=Trichoplax TaxID=1... [more]
UPI001C70C9AC1.110e-945.16DNA repair protein REV1-like n=1 Tax=Penaeus japon... [more]
A0A3R7MPY2_PENVA1.510e-945.16DNA repair protein REV1 n=2 Tax=Penaeus vannamei T... [more]
UPI001FB855E41.510e-945.16DNA repair protein REV1-like n=2 Tax=Penaeus TaxID... [more]
UPI00145820AD3.870e-936.36DNA repair protein REV1-like n=1 Tax=Pecten maximu... [more]
A0A7S3C8L0_9CHLO5.180e-946.77DNA polymerase kappa n=1 Tax=Chloropicon roscoffen... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.20coord: 1..56
e-value: 3.3E-17
score: 64.5
NoneNo IPR availablePANTHERPTHR45990FAMILY NOT NAMEDcoord: 2..65
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig88495contigS-dermatodea_contig88495:97..354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig88495.16970.1mRNA_S-dermatodea_contig88495.16970.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig88495 97..354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig88495.16970.1 ID=prot_S-dermatodea_contig88495.16970.1|Name=mRNA_S-dermatodea_contig88495.16970.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=86bp
RVQDLPGVGWKLRRRLNDAGLNSCSDLWPLSAAHMQKGLGLGDKTGQALW
EACRGIDKRPVQVRAHTMNVINAMKTIKHHDCDEFF
back to top